RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 CAPN15O75808 1086 aa14.16□□□□□ -0.14
MSH5-206ENST00000423982 JUNBP17275 347 aaPredicted RBP14.16□□□□□ -0.14
MSH5-206ENST00000423982 PRKACGP22612 351 aa14.16□□□□□ -0.14
MSH5-206ENST00000423982 HPCAL1P37235 193 aa14.16□□□□□ -0.14
MSH5-206ENST00000423982 ALDH3A2P51648 485 aa14.16□□□□□ -0.14
MSH5-206ENST00000423982 POLR2JP52435 117 aaKnown RBP14.16□□□□□ -0.14
MSH5-206ENST00000423982 WDR5P61964 334 aaKnown RBP14.16□□□□□ -0.14
MSH5-206ENST00000423982 TSNQ15631 228 aaKnown RBP14.16□□□□□ -0.14
MSH5-206ENST00000423982 FAM171A1Q5VUB5 890 aa14.16□□□□□ -0.14
MSH5-206ENST00000423982 OVOS1Q6IE37 1185 aa14.16□□□□□ -0.14
MSH5-206ENST00000423982 LAIR2Q6ISS4 152 aa14.16□□□□□ -0.14
MSH5-206ENST00000423982 C16orf59Q7L2K0 433 aa14.16□□□□□ -0.14
MSH5-206ENST00000423982 CADM3Q8N126 398 aa14.16□□□□□ -0.14
MSH5-206ENST00000423982 OR10T2Q8NGX3 314 aa14.16□□□□□ -0.14
MSH5-206ENST00000423982 ZFP90Q8TF47 636 aa14.16□□□□□ -0.14
MSH5-206ENST00000423982 BCL7CQ8WUZ0 217 aaPredicted RBP14.16□□□□□ -0.14
MSH5-206ENST00000423982 OSCP1Q8WVF1 389 aa14.16□□□□□ -0.14
MSH5-206ENST00000423982 NSMCE2Q96MF7 247 aa14.16□□□□□ -0.14
MSH5-206ENST00000423982 GPN2Q9H9Y4 310 aaPredicted RBP14.16□□□□□ -0.14
MSH5-206ENST00000423982 AIG1Q9NVV5 245 aa14.16□□□□□ -0.14
MSH5-206ENST00000423982 PAK1IP1Q9NWT1 392 aaPredicted RBP14.16□□□□□ -0.14
MSH5-206ENST00000423982 GALPQ9UBC7 116 aa14.16□□□□□ -0.14
MSH5-206ENST00000423982 UXTQ9UBK9 157 aaPredicted RBP14.16□□□□□ -0.14
MSH5-206ENST00000423982 KIAA0355O15063 1070 aa14.15□□□□□ -0.14
MSH5-206ENST00000423982 SLC2A3P11169 496 aa14.15□□□□□ -0.14
MSH5-206ENST00000423982 NFKBIAP25963 317 aa14.15□□□□□ -0.14
MSH5-206ENST00000423982 MTHFRP42898 656 aa14.15□□□□□ -0.14
MSH5-206ENST00000423982 DGKQP52824 942 aa14.15□□□□□ -0.14
MSH5-206ENST00000423982 YWHAHQ04917 246 aaPredicted RBP14.15□□□□□ -0.14
MSH5-206ENST00000423982 ZNF33AQ06730 810 aa14.15□□□□□ -0.14
MSH5-206ENST00000423982 PGS1Q32NB8 556 aa14.15□□□□□ -0.14
MSH5-206ENST00000423982 PAQR3Q6TCH7 311 aa14.15□□□□□ -0.14
MSH5-206ENST00000423982 ENPP6Q6UWR7 440 aa14.15□□□□□ -0.14
MSH5-206ENST00000423982 THAP5Q7Z6K1 395 aa14.15□□□□□ -0.14
MSH5-206ENST00000423982 RAB44Q7Z6P3 723 aaPredicted RBP14.15□□□□□ -0.14
MSH5-206ENST00000423982 CRIPAKQ8N1N5 446 aa14.15□□□□□ -0.14
MSH5-206ENST00000423982 GOLM1Q8NBJ4 401 aa14.15□□□□□ -0.14
MSH5-206ENST00000423982 FBXO30Q8TB52 745 aa14.15□□□□□ -0.14
MSH5-206ENST00000423982 SDCCAG3Q96C92 435 aa14.15□□□□□ -0.14
MSH5-206ENST00000423982 HMCESQ96FZ2 354 aa14.15□□□□□ -0.14
MSH5-206ENST00000423982 IMP4Q96G21 291 aaKnown RBP14.15□□□□□ -0.14
MSH5-206ENST00000423982 SMARCD1Q96GM5 515 aa14.15□□□□□ -0.14
MSH5-206ENST00000423982 TSPAN18Q96SJ8 248 aa14.15□□□□□ -0.14
MSH5-206ENST00000423982 RTP3Q9BQQ7 232 aa14.15□□□□□ -0.14
MSH5-206ENST00000423982 ALOXE3Q9BYJ1 711 aa14.15□□□□□ -0.14
MSH5-206ENST00000423982 CCDC90BQ9GZT6 254 aa14.15□□□□□ -0.14
MSH5-206ENST00000423982 SLC25A51Q9H1U9 297 aa14.15□□□□□ -0.14
MSH5-206ENST00000423982 DNMT3BQ9UBC3 853 aaKnown RBP14.15□□□□□ -0.14
MSH5-206ENST00000423982 TSR3Q9UJK0 312 aaKnown RBP14.15□□□□□ -0.14
MSH5-206ENST00000423982 INVSQ9Y283 1065 aa14.15□□□□□ -0.14
MSH5-206ENST00000423982 HS3ST4Q9Y661 456 aa14.15□□□□□ -0.14
MSH5-206ENST00000423982 MICAL3Q7RTP6 2002 aa14.15□□□□□ -0.14
MSH5-206ENST00000423982 REV3LO60673 3130 aa14.15□□□□□ -0.14
MSH5-206ENST00000423982 UBA6A0AVT1 1052 aaPredicted RBP14.15□□□□□ -0.14
MSH5-206ENST00000423982 CCDC162PA2VCL2 907 aa14.15□□□□□ -0.14
MSH5-206ENST00000423982 MROH6A6NGR9 719 aa14.15□□□□□ -0.14
MSH5-206ENST00000423982 A8MU76 341 aa14.15□□□□□ -0.14
MSH5-206ENST00000423982 E9PAM4 449 aa14.15□□□□□ -0.14
MSH5-206ENST00000423982 H0YAE9 185 aa14.15□□□□□ -0.14
MSH5-206ENST00000423982 SLC7A4O43246 635 aa14.15□□□□□ -0.14
MSH5-206ENST00000423982 EEDO75530 441 aaKnown RBP14.15□□□□□ -0.14
MSH5-206ENST00000423982 GSTT2P0CG29 244 aa14.15□□□□□ -0.14
MSH5-206ENST00000423982 GSTT2BP0CG30 244 aa14.15□□□□□ -0.14
MSH5-206ENST00000423982 TPD52P55327 224 aaPredicted RBP14.15□□□□□ -0.14
MSH5-206ENST00000423982 LCP2Q13094 533 aa14.15□□□□□ -0.14
MSH5-206ENST00000423982 GALNT3Q14435 633 aa14.15□□□□□ -0.14
MSH5-206ENST00000423982 MANEALQ5VSG8 457 aa14.15□□□□□ -0.14
MSH5-206ENST00000423982 TAS1R1Q7RTX1 841 aa14.15□□□□□ -0.14
MSH5-206ENST00000423982 UBE2Q1Q7Z7E8 422 aa14.15□□□□□ -0.14
MSH5-206ENST00000423982 DSG4Q86SJ6 1040 aa14.15□□□□□ -0.14
MSH5-206ENST00000423982 CHDHQ8NE62 594 aaPredicted RBP14.15□□□□□ -0.14
MSH5-206ENST00000423982 MBOAT4Q96T53 435 aa14.15□□□□□ -0.14
MSH5-206ENST00000423982 TDRD1Q9BXT4 1180 aaKnown RBP14.15□□□□□ -0.14
MSH5-206ENST00000423982 MFSD1Q9H3U5 465 aa14.15□□□□□ -0.14
MSH5-206ENST00000423982 ELAC1Q9H777 363 aaKnown RBP14.15□□□□□ -0.14
MSH5-206ENST00000423982 ATP13A1Q9HD20 1204 aa14.15□□□□□ -0.14
MSH5-206ENST00000423982 ECI2O75521 394 aa14.14□□□□□ -0.15
MSH5-206ENST00000423982 JRKO75564 520 aa14.14□□□□□ -0.15
MSH5-206ENST00000423982 ESRRBO95718 433 aa14.14□□□□□ -0.15
MSH5-206ENST00000423982 RAB15P59190 212 aa14.14□□□□□ -0.15
MSH5-206ENST00000423982 FOXM1Q08050 763 aa14.14□□□□□ -0.15
MSH5-206ENST00000423982 CD47Q08722 323 aa14.14□□□□□ -0.15
MSH5-206ENST00000423982 OXA1LQ15070 435 aa14.14□□□□□ -0.15
MSH5-206ENST00000423982 METTL23Q86XA0 190 aa14.14□□□□□ -0.15
MSH5-206ENST00000423982 PGBD5Q8N414 524 aa14.14□□□□□ -0.15
MSH5-206ENST00000423982 FBXO39Q8N4B4 442 aa14.14□□□□□ -0.15
MSH5-206ENST00000423982 PROKR1Q8TCW9 393 aa14.14□□□□□ -0.15
MSH5-206ENST00000423982 PSMG2Q969U7 264 aa14.14□□□□□ -0.15
MSH5-206ENST00000423982 SMIM14Q96QK8 99 aa14.14□□□□□ -0.15
MSH5-206ENST00000423982 YME1L1Q96TA2 773 aa14.14□□□□□ -0.15
MSH5-206ENST00000423982 CORO1BQ9BR76 489 aa14.14□□□□□ -0.15
MSH5-206ENST00000423982 CCDC68Q9H2F9 335 aa14.14□□□□□ -0.15
MSH5-206ENST00000423982 CATSPERBQ9H7T0 1116 aa14.14□□□□□ -0.15
MSH5-206ENST00000423982 GMIPQ9P107 970 aa14.14□□□□□ -0.15
MSH5-206ENST00000423982 RNF112Q9ULX5 631 aa14.14□□□□□ -0.15
MSH5-206ENST00000423982 MYO7AQ13402 2215 aa14.14□□□□□ -0.15
MSH5-206ENST00000423982 CCDC85CA6NKD9 419 aa14.14□□□□□ -0.15
MSH5-206ENST00000423982 CD3EAPO15446 510 aaKnown RBP14.14□□□□□ -0.15
MSH5-206ENST00000423982 XPNPEP2O43895 674 aa14.14□□□□□ -0.15
MSH5-206ENST00000423982 PARNO95453 639 aaKnown RBP14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms