RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 SLC35G4P0C7Q5 338 aa10.73□□□□□ -0.69
USP49-204ENST00000423567 AMD1P17707 334 aa10.73□□□□□ -0.69
USP49-204ENST00000423567 CSTF2P33240 577 aaKnown RBP eCLIP10.73□□□□□ -0.69
USP49-204ENST00000423567 SLC19A1P41440 591 aa10.73□□□□□ -0.69
USP49-204ENST00000423567 NSG1P42857 185 aa10.73□□□□□ -0.69
USP49-204ENST00000423567 FNTAP49354 379 aa10.73□□□□□ -0.69
USP49-204ENST00000423567 LIMK2P53671 638 aa10.73□□□□□ -0.69
USP49-204ENST00000423567 TERF1P54274 439 aa10.73□□□□□ -0.69
USP49-204ENST00000423567 GSTM4Q03013 218 aa10.73□□□□□ -0.69
USP49-204ENST00000423567 ITIH4Q14624 930 aa10.73□□□□□ -0.69
USP49-204ENST00000423567 CYP1B1Q16678 543 aa10.73□□□□□ -0.69
USP49-204ENST00000423567 FASTKD1Q53R41 847 aaKnown RBP10.73□□□□□ -0.69
USP49-204ENST00000423567 AARS2Q5JTZ9 985 aaKnown RBP10.73□□□□□ -0.69
USP49-204ENST00000423567 METRNLQ641Q3 311 aa10.73□□□□□ -0.69
USP49-204ENST00000423567 LRRC8BQ6P9F7 803 aa10.73□□□□□ -0.69
USP49-204ENST00000423567 CERS6Q6ZMG9 384 aa10.73□□□□□ -0.69
USP49-204ENST00000423567 JAMLQ86YT9 394 aa10.73□□□□□ -0.69
USP49-204ENST00000423567 CFAP206Q8IYR0 622 aa10.73□□□□□ -0.69
USP49-204ENST00000423567 ZNF248Q8NDW4 579 aa10.73□□□□□ -0.69
USP49-204ENST00000423567 OR4L1Q8NH43 312 aa10.73□□□□□ -0.69
USP49-204ENST00000423567 SNIP1Q8TAD8 396 aaKnown RBP10.73□□□□□ -0.69
USP49-204ENST00000423567 HM13Q8TCT9 377 aa10.73□□□□□ -0.69
USP49-204ENST00000423567 NCSTNQ92542 709 aa10.73□□□□□ -0.69
USP49-204ENST00000423567 HDAC10Q969S8 669 aa10.73□□□□□ -0.69
USP49-204ENST00000423567 CCDC97Q96F63 343 aaPredicted RBP10.73□□□□□ -0.69
USP49-204ENST00000423567 LINC00615Q96LM1 132 aaPredicted RBP10.73□□□□□ -0.69
USP49-204ENST00000423567 CCDC74BQ96LY2 380 aa10.73□□□□□ -0.69
USP49-204ENST00000423567 SLC46A1Q96NT5 459 aa10.73□□□□□ -0.69
USP49-204ENST00000423567 NAPGQ99747 312 aaPredicted RBP10.73□□□□□ -0.69
USP49-204ENST00000423567 CCM2Q9BSQ5 444 aa10.73□□□□□ -0.69
USP49-204ENST00000423567 SEMA6CQ9H3T2 930 aa10.73□□□□□ -0.69
USP49-204ENST00000423567 ZNF624Q9P2J8 865 aaPredicted RBP10.73□□□□□ -0.69
USP49-204ENST00000423567 PISDQ9UG56 409 aa10.73□□□□□ -0.69
USP49-204ENST00000423567 PSMD13Q9UNM6 376 aa10.73□□□□□ -0.69
USP49-204ENST00000423567 EPG5Q9HCE0 2579 aa10.72□□□□□ -0.69
USP49-204ENST00000423567 AKAP13Q12802 2813 aa10.72□□□□□ -0.69
USP49-204ENST00000423567 SCN8AQ9UQD0 1980 aa10.72□□□□□ -0.69
USP49-204ENST00000423567 IGLV3-16A0A075B6K0 115 aa10.72□□□□□ -0.69
USP49-204ENST00000423567 C17orf113A0A1B0GUU1 675 aa10.72□□□□□ -0.69
USP49-204ENST00000423567 CCDC162PA2VCL2 907 aa10.72□□□□□ -0.69
USP49-204ENST00000423567 CTAGE9A4FU28 777 aa10.72□□□□□ -0.69
USP49-204ENST00000423567 AGRPO00253 132 aa10.72□□□□□ -0.69
USP49-204ENST00000423567 IFRD1O00458 451 aaPredicted RBP10.72□□□□□ -0.69
USP49-204ENST00000423567 UBXN7O94888 489 aa10.72□□□□□ -0.69
USP49-204ENST00000423567 GOT2P00505 430 aaKnown RBP10.72□□□□□ -0.69
USP49-204ENST00000423567 POLBP06746 335 aa10.72□□□□□ -0.69
USP49-204ENST00000423567 OR56A5P0C7T3 313 aa10.72□□□□□ -0.69
USP49-204ENST00000423567 THRAP10827 490 aa10.72□□□□□ -0.69
USP49-204ENST00000423567 BRAFP15056 766 aa10.72□□□□□ -0.69
USP49-204ENST00000423567 MPSTP25325 297 aa10.72□□□□□ -0.69
USP49-204ENST00000423567 PSMA3P25788 255 aa10.72□□□□□ -0.69
USP49-204ENST00000423567 FOXN2P32314 431 aa10.72□□□□□ -0.69
USP49-204ENST00000423567 EIF2S3P41091 472 aaKnown RBP10.72□□□□□ -0.69
USP49-204ENST00000423567 ABCG1P45844 678 aa10.72□□□□□ -0.69
USP49-204ENST00000423567 CDKN1CP49918 316 aaPredicted RBP10.72□□□□□ -0.69
USP49-204ENST00000423567 ARSDP51689 593 aa10.72□□□□□ -0.69
USP49-204ENST00000423567 ACVR1Q04771 509 aa10.72□□□□□ -0.69
USP49-204ENST00000423567 KRT33BQ14525 404 aa10.72□□□□□ -0.69
USP49-204ENST00000423567 CLCA4Q14CN2 919 aa10.72□□□□□ -0.69
USP49-204ENST00000423567 PLCL1Q15111 1095 aa10.72□□□□□ -0.69
USP49-204ENST00000423567 PPP1R7Q15435 360 aa10.72□□□□□ -0.69
USP49-204ENST00000423567 RPE65Q16518 533 aa10.72□□□□□ -0.69
USP49-204ENST00000423567 DBN1Q16643 649 aa10.72□□□□□ -0.69
USP49-204ENST00000423567 SNAP47Q5SQN1 464 aa10.72□□□□□ -0.69
USP49-204ENST00000423567 TMEM164Q5U3C3 297 aa10.72□□□□□ -0.69
USP49-204ENST00000423567 TTC27Q6P3X3 843 aa10.72□□□□□ -0.69
USP49-204ENST00000423567 KLHL35Q6PF15 583 aa10.72□□□□□ -0.69
USP49-204ENST00000423567 WDR74Q6RFH5 385 aaPredicted RBP10.72□□□□□ -0.69
USP49-204ENST00000423567 FAM83HQ6ZRV2 1179 aaPredicted RBP10.72□□□□□ -0.69
USP49-204ENST00000423567 PLXDC1Q8IUK5 500 aa10.72□□□□□ -0.69
USP49-204ENST00000423567 OTUD6BQ8N6M0 293 aa10.72□□□□□ -0.69
USP49-204ENST00000423567 AGBL5Q8NDL9 886 aa10.72□□□□□ -0.69
USP49-204ENST00000423567 OR13J1Q8NGT2 312 aa10.72□□□□□ -0.69
USP49-204ENST00000423567 TSSK1BQ9BXA7 367 aa10.72□□□□□ -0.69
USP49-204ENST00000423567 TBC1D10AQ9BXI6 508 aa10.72□□□□□ -0.69
USP49-204ENST00000423567 XAB2Q9HCS7 855 aaKnown RBP10.72□□□□□ -0.69
USP49-204ENST00000423567 CHRAC1Q9NRG0 131 aa10.72□□□□□ -0.69
USP49-204ENST00000423567 IMP3Q9NV31 184 aaKnown RBP10.72□□□□□ -0.69
USP49-204ENST00000423567 SAMD15Q9P1V8 674 aa10.72□□□□□ -0.69
USP49-204ENST00000423567 SLC2A6Q9UGQ3 507 aa10.72□□□□□ -0.69
USP49-204ENST00000423567 PYCARDQ9ULZ3 195 aa10.72□□□□□ -0.69
USP49-204ENST00000423567 WDR37Q9Y2I8 494 aa10.72□□□□□ -0.69
USP49-204ENST00000423567 HEBP2Q9Y5Z4 205 aa10.72□□□□□ -0.69
USP49-204ENST00000423567 RP1P56715 2156 aa10.72□□□□□ -0.69
USP49-204ENST00000423567 SPEGQ15772 3267 aa10.71□□□□□ -0.69
USP49-204ENST00000423567 A0A087WV48 116 aa10.71□□□□□ -0.69
USP49-204ENST00000423567 A0A1W2PNU3 283 aaPredicted RBP10.71□□□□□ -0.69
USP49-204ENST00000423567 OR51F1A6NGY5 319 aa10.71□□□□□ -0.69
USP49-204ENST00000423567 PFDN6O15212 129 aa10.71□□□□□ -0.69
USP49-204ENST00000423567 ZNF185O15231 689 aa10.71□□□□□ -0.69
USP49-204ENST00000423567 TLX3O43711 291 aaPredicted RBP10.71□□□□□ -0.69
USP49-204ENST00000423567 FTH1P02794 183 aa10.71□□□□□ -0.69
USP49-204ENST00000423567 PRSS56P0CW18 603 aa10.71□□□□□ -0.69
USP49-204ENST00000423567 MTHFD1P11586 935 aaKnown RBP10.71□□□□□ -0.69
USP49-204ENST00000423567 HGFP14210 728 aa10.71□□□□□ -0.69
USP49-204ENST00000423567 MGAT1P26572 445 aa10.71□□□□□ -0.69
USP49-204ENST00000423567 NDUFS1P28331 727 aa10.71□□□□□ -0.69
USP49-204ENST00000423567 CSF2RBP32927 897 aa10.71□□□□□ -0.69
USP49-204ENST00000423567 MAGEA6P43360 314 aa10.71□□□□□ -0.69
USP49-204ENST00000423567 MAPK10P53779 464 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms