RNA–Protein interactions for RNA: ENST00000423485.5

TOP2A-201, Transcript of DNA topoisomerase II alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP2A, Length 5,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-201ENST00000423485 ZNF592Q92610 1267 aa3.5□□□□□ -1.85
TOP2A-201ENST00000423485 DNAJA3Q96EY1 480 aa3.5□□□□□ -1.85
TOP2A-201ENST00000423485 ZC3HAV1LQ96H79 300 aaKnown RBP3.5□□□□□ -1.85
TOP2A-201ENST00000423485 ZFYVE19Q96K21 471 aa3.5□□□□□ -1.85
TOP2A-201ENST00000423485 PCBD2Q9H0N5 130 aa3.5□□□□□ -1.85
TOP2A-201ENST00000423485 TNKS2Q9H2K2 1166 aa3.5□□□□□ -1.85
TOP2A-201ENST00000423485 NXF3Q9H4D5 531 aaKnown RBP3.5□□□□□ -1.85
TOP2A-201ENST00000423485 SMOC1Q9H4F8 434 aa3.5□□□□□ -1.85
TOP2A-201ENST00000423485 TXNRD2Q9NNW7 524 aa3.5□□□□□ -1.85
TOP2A-201ENST00000423485 KLHL1Q9NR64 748 aa3.5□□□□□ -1.85
TOP2A-201ENST00000423485 ANO10Q9NW15 660 aa3.5□□□□□ -1.85
TOP2A-201ENST00000423485 NSMCE4AQ9NXX6 385 aa3.5□□□□□ -1.85
TOP2A-201ENST00000423485 PCDHGB2Q9Y5G2 931 aa3.5□□□□□ -1.85
TOP2A-201ENST00000423485 PTPRZ1P23471 2315 aaPredicted RBP3.5□□□□□ -1.85
TOP2A-201ENST00000423485 KLRG2A4D1S0 409 aaPredicted RBP3.5□□□□□ -1.85
TOP2A-201ENST00000423485 ANKRD34BA5PLL1 514 aa3.5□□□□□ -1.85
TOP2A-201ENST00000423485 ARHGEF33A8MVX0 844 aa3.5□□□□□ -1.85
TOP2A-201ENST00000423485 C1QTNF9BB2RNN3 333 aa3.5□□□□□ -1.85
TOP2A-201ENST00000423485 LINC01387J3KSC0 135 aa3.5□□□□□ -1.85
TOP2A-201ENST00000423485 M0QZ24 198 aa3.5□□□□□ -1.85
TOP2A-201ENST00000423485 MAGEB3O15480 346 aa3.5□□□□□ -1.85
TOP2A-201ENST00000423485 ZBTB14O43829 449 aa3.5□□□□□ -1.85
TOP2A-201ENST00000423485 SCN2BO60939 215 aa3.5□□□□□ -1.85
TOP2A-201ENST00000423485 SMIM24O75264 130 aa3.5□□□□□ -1.85
TOP2A-201ENST00000423485 IFNA6P05013 189 aa3.5□□□□□ -1.85
TOP2A-201ENST00000423485 SFTPBP07988 381 aa3.5□□□□□ -1.85
TOP2A-201ENST00000423485 C1QTNF9P0C862 333 aa3.5□□□□□ -1.85
TOP2A-201ENST00000423485 CDH2P19022 906 aaPredicted RBP3.5□□□□□ -1.85
TOP2A-201ENST00000423485 NR2F2P24468 414 aa3.5□□□□□ -1.85
TOP2A-201ENST00000423485 HTR1EP28566 365 aa3.5□□□□□ -1.85
TOP2A-201ENST00000423485 TUBP50607 506 aa3.5□□□□□ -1.85
TOP2A-201ENST00000423485 CCNG1P51959 295 aa3.5□□□□□ -1.85
TOP2A-201ENST00000423485 SLC7A2P52569 658 aa3.5□□□□□ -1.85
TOP2A-201ENST00000423485 CDH4P55283 916 aa3.5□□□□□ -1.85
TOP2A-201ENST00000423485 RAB25P57735 213 aa3.5□□□□□ -1.85
TOP2A-201ENST00000423485 YPEL5P62699 121 aa3.5□□□□□ -1.85
TOP2A-201ENST00000423485 HHEXQ03014 270 aa3.5□□□□□ -1.85
TOP2A-201ENST00000423485 GPR17Q13304 367 aa3.5□□□□□ -1.85
TOP2A-201ENST00000423485 CAMK2DQ13557 499 aa3.5□□□□□ -1.85
TOP2A-201ENST00000423485 DLG2Q15700 870 aa3.5□□□□□ -1.85
TOP2A-201ENST00000423485 STK11Q15831 433 aa3.5□□□□□ -1.85
TOP2A-201ENST00000423485 CLPPQ16740 277 aaPredicted RBP3.5□□□□□ -1.85
TOP2A-201ENST00000423485 BTBD16Q32M84 506 aa3.5□□□□□ -1.85
TOP2A-201ENST00000423485 MSS51Q4VC12 460 aa3.5□□□□□ -1.85
TOP2A-201ENST00000423485 GLE1Q53GS7 698 aaKnown RBP3.5□□□□□ -1.85
TOP2A-201ENST00000423485 SH2D4BQ5SQS7 431 aa3.5□□□□□ -1.85
TOP2A-201ENST00000423485 TLDC1Q6P9B6 456 aa3.5□□□□□ -1.85
TOP2A-201ENST00000423485 SEZ6L2Q6UXD5 910 aa3.5□□□□□ -1.85
TOP2A-201ENST00000423485 LRRC74BQ6ZQY2 392 aa3.5□□□□□ -1.85
TOP2A-201ENST00000423485 TIPARPQ7Z3E1 657 aaKnown RBP3.5□□□□□ -1.85
TOP2A-201ENST00000423485 ARL10Q8N8L6 244 aa3.5□□□□□ -1.85
TOP2A-201ENST00000423485 NDNFQ8TB73 568 aa3.5□□□□□ -1.85
TOP2A-201ENST00000423485 RAB39BQ96DA2 213 aa3.5□□□□□ -1.85
TOP2A-201ENST00000423485 SAAL1Q96ER3 474 aa3.5□□□□□ -1.85
TOP2A-201ENST00000423485 FGD4Q96M96 766 aa3.5□□□□□ -1.85
TOP2A-201ENST00000423485 FRMD6Q96NE9 622 aa3.5□□□□□ -1.85
TOP2A-201ENST00000423485 PIMREGQ9BSJ6 248 aa3.5□□□□□ -1.85
TOP2A-201ENST00000423485 EGLN1Q9GZT9 426 aa3.5□□□□□ -1.85
TOP2A-201ENST00000423485 AGPAT5Q9NUQ2 364 aa3.5□□□□□ -1.85
TOP2A-201ENST00000423485 CPNE7Q9UBL6 633 aa3.5□□□□□ -1.85
TOP2A-201ENST00000423485 PLEKHB1Q9UF11 243 aaPredicted RBP3.5□□□□□ -1.85
TOP2A-201ENST00000423485 FOXD3Q9UJU5 478 aaPredicted RBP3.5□□□□□ -1.85
TOP2A-201ENST00000423485 PRKAB1Q9Y478 270 aa3.5□□□□□ -1.85
TOP2A-201ENST00000423485 PCDHB1Q9Y5F3 818 aa3.5□□□□□ -1.85
TOP2A-201ENST00000423485 PCDHA13Q9Y5I0 950 aa3.5□□□□□ -1.85
TOP2A-201ENST00000423485 PLSCR5A0PG75 271 aa3.5□□□□□ -1.85
TOP2A-201ENST00000423485 HSPB2A8KAH6 182 aa3.5□□□□□ -1.85
TOP2A-201ENST00000423485 CHUKO15111 745 aa3.5□□□□□ -1.85
TOP2A-201ENST00000423485 SCRG1O75711 98 aa3.5□□□□□ -1.85
TOP2A-201ENST00000423485 CYB5AP00167 134 aa3.5□□□□□ -1.85
TOP2A-201ENST00000423485 TYRP1P17643 537 aa3.5□□□□□ -1.85
TOP2A-201ENST00000423485 POU3F3P20264 500 aaPredicted RBP3.5□□□□□ -1.85
TOP2A-201ENST00000423485 CHRNA3P32297 505 aa3.5□□□□□ -1.85
TOP2A-201ENST00000423485 RIDAP52758 137 aaKnown RBP3.5□□□□□ -1.85
TOP2A-201ENST00000423485 CCZ1BP86790 482 aa3.5□□□□□ -1.85
TOP2A-201ENST00000423485 CCZ1P86791 482 aaPredicted RBP3.5□□□□□ -1.85
TOP2A-201ENST00000423485 SLC13A2Q13183 592 aa3.5□□□□□ -1.85
TOP2A-201ENST00000423485 DNASE1L3Q13609 305 aa3.5□□□□□ -1.85
TOP2A-201ENST00000423485 RPS6KA1Q15418 735 aa3.5□□□□□ -1.85
TOP2A-201ENST00000423485 HSPB2Q16082 182 aa3.5□□□□□ -1.85
TOP2A-201ENST00000423485 PCSK7Q16549 785 aa3.5□□□□□ -1.85
TOP2A-201ENST00000423485 PLA2G4EQ3MJ16 856 aa3.5□□□□□ -1.85
TOP2A-201ENST00000423485 AAGABQ6PD74 315 aa3.5□□□□□ -1.85
TOP2A-201ENST00000423485 BTNL3Q6UXE8 466 aa3.5□□□□□ -1.85
TOP2A-201ENST00000423485 USP30Q70CQ3 517 aa3.5□□□□□ -1.85
TOP2A-201ENST00000423485 MED25Q71SY5 747 aa3.5□□□□□ -1.85
TOP2A-201ENST00000423485 CCDC186Q7Z3E2 898 aa3.5□□□□□ -1.85
TOP2A-201ENST00000423485 PIWIL3Q7Z3Z3 882 aaKnown RBP3.5□□□□□ -1.85
TOP2A-201ENST00000423485 COMMD2Q86X83 199 aa3.5□□□□□ -1.85
TOP2A-201ENST00000423485 LRRC49Q8IUZ0 686 aa3.5□□□□□ -1.85
TOP2A-201ENST00000423485 CACTIN-AS1Q8N1I8 211 aa3.5□□□□□ -1.85
TOP2A-201ENST00000423485 GHDCQ8N2G8 530 aa3.5□□□□□ -1.85
TOP2A-201ENST00000423485 BANPQ8N9N5 519 aa3.5□□□□□ -1.85
TOP2A-201ENST00000423485 CAMKVQ8NCB2 501 aa3.5□□□□□ -1.85
TOP2A-201ENST00000423485 CLHC1Q8NHS4 586 aa3.5□□□□□ -1.85
TOP2A-201ENST00000423485 ZNF563Q8TA94 476 aa3.5□□□□□ -1.85
TOP2A-201ENST00000423485 PMEPA1Q969W9 287 aa3.5□□□□□ -1.85
TOP2A-201ENST00000423485 HIC2Q96JB3 615 aa3.5□□□□□ -1.85
TOP2A-201ENST00000423485 SUSD3Q96L08 255 aa3.5□□□□□ -1.85
TOP2A-201ENST00000423485 DCLRE1CQ96SD1 692 aaKnown RBP3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms