RNA–Protein interactions for RNA: ENST00000422074.2

LINC00397-201, long intergenic non-protein coding RNA 397, humanhuman

TSL 3 BASIC

Gene LINC00397, Length 344 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-201ENST00000422074 ZDHHC20Q5W0Z9 365 aa3.62□□□□□ -1.83
LINC00397-201ENST00000422074 L3MBTL4Q8NA19 623 aa3.62□□□□□ -1.83
LINC00397-201ENST00000422074 GSDMBQ8TAX9 411 aa3.62□□□□□ -1.83
LINC00397-201ENST00000422074 POMGNT1Q8WZA1 660 aa3.62□□□□□ -1.83
LINC00397-201ENST00000422074 ZKSCAN4Q969J2 545 aaPredicted RBP3.62□□□□□ -1.83
LINC00397-201ENST00000422074 SLC47A1Q96FL8 570 aa3.62□□□□□ -1.83
LINC00397-201ENST00000422074 NUDCD1Q96RS6 583 aa3.62□□□□□ -1.83
LINC00397-201ENST00000422074 TUBB2BQ9BVA1 445 aa3.62□□□□□ -1.83
LINC00397-201ENST00000422074 SEMA6AQ9H2E6 1030 aa3.62□□□□□ -1.83
LINC00397-201ENST00000422074 COQ3Q9NZJ6 369 aa3.62□□□□□ -1.83
LINC00397-201ENST00000422074 TMEM181Q9P2C4 612 aa3.62□□□□□ -1.83
LINC00397-201ENST00000422074 DNAJB4Q9UDY4 337 aa3.62□□□□□ -1.83
LINC00397-201ENST00000422074 NENFQ9UMX5 172 aa3.62□□□□□ -1.83
LINC00397-201ENST00000422074 RNF215Q9Y6U7 377 aa3.62□□□□□ -1.83
LINC00397-201ENST00000422074 FRMD3A2A2Y4 597 aa3.61□□□□□ -1.83
LINC00397-201ENST00000422074 ERI2A8K979 691 aaKnown RBP3.61□□□□□ -1.83
LINC00397-201ENST00000422074 F5H0A9 414 aaPredicted RBP3.61□□□□□ -1.83
LINC00397-201ENST00000422074 J3KRW8 73 aa3.61□□□□□ -1.83
LINC00397-201ENST00000422074 PLK4O00444 970 aa3.61□□□□□ -1.83
LINC00397-201ENST00000422074 CLIC2O15247 247 aa3.61□□□□□ -1.83
LINC00397-201ENST00000422074 EXTL3O43909 919 aa3.61□□□□□ -1.83
LINC00397-201ENST00000422074 EML2O95834 649 aa3.61□□□□□ -1.83
LINC00397-201ENST00000422074 FRMD6-AS1P0C7T7 363 aa3.61□□□□□ -1.83
LINC00397-201ENST00000422074 CHMP24386 653 aa3.61□□□□□ -1.83
LINC00397-201ENST00000422074 THOP1P52888 689 aa3.61□□□□□ -1.83
LINC00397-201ENST00000422074 PRAMEP78395 509 aa3.61□□□□□ -1.83
LINC00397-201ENST00000422074 IRX1P78414 480 aaPredicted RBP3.61□□□□□ -1.83
LINC00397-201ENST00000422074 ASTE1Q2TB18 679 aaPredicted RBP3.61□□□□□ -1.83
LINC00397-201ENST00000422074 KRT71Q3SY84 523 aa3.61□□□□□ -1.83
LINC00397-201ENST00000422074 ZNF772Q68DY9 489 aaPredicted RBP3.61□□□□□ -1.83
LINC00397-201ENST00000422074 MAATS1Q7Z4T9 603 aa3.61□□□□□ -1.83
LINC00397-201ENST00000422074 GALNT13Q8IUC8 556 aa3.61□□□□□ -1.83
LINC00397-201ENST00000422074 ELMOD3Q96FG2 381 aa3.61□□□□□ -1.83
LINC00397-201ENST00000422074 PGAM5Q96HS1 289 aa3.61□□□□□ -1.83
LINC00397-201ENST00000422074 OPRPNQ99935 248 aaPredicted RBP3.61□□□□□ -1.83
LINC00397-201ENST00000422074 PSD2Q9BQI7 771 aa3.61□□□□□ -1.83
LINC00397-201ENST00000422074 RTP3Q9BQQ7 232 aa3.61□□□□□ -1.83
LINC00397-201ENST00000422074 C1QTNF1Q9BXJ1 281 aa3.61□□□□□ -1.83
LINC00397-201ENST00000422074 DENND2DQ9H6A0 471 aaPredicted RBP3.61□□□□□ -1.83
LINC00397-201ENST00000422074 FGF22Q9HCT0 170 aa3.61□□□□□ -1.83
LINC00397-201ENST00000422074 MBNL1Q9NR56 388 aaKnown RBP3.61□□□□□ -1.83
LINC00397-201ENST00000422074 SMC4Q9NTJ3 1288 aa3.61□□□□□ -1.83
LINC00397-201ENST00000422074 ZNF69Q9UC07 566 aa3.61□□□□□ -1.83
LINC00397-201ENST00000422074 KCNJ14Q9UNX9 436 aa3.61□□□□□ -1.83
LINC00397-201ENST00000422074 SLCO1B7G3V0H7 640 aa3.6□□□□□ -1.83
LINC00397-201ENST00000422074 H3BQ06 376 aaPredicted RBP3.6□□□□□ -1.83
LINC00397-201ENST00000422074 GPC4O75487 556 aa3.6□□□□□ -1.83
LINC00397-201ENST00000422074 ZNF821O75541 412 aaPredicted RBP3.6□□□□□ -1.83
LINC00397-201ENST00000422074 RNASEH2AO75792 299 aaKnown RBP3.6□□□□□ -1.83
LINC00397-201ENST00000422074 ZFAND5O76080 213 aa3.6□□□□□ -1.83
LINC00397-201ENST00000422074 MBD4O95243 580 aa3.6□□□□□ -1.83
LINC00397-201ENST00000422074 TBX18O95935 607 aa3.6□□□□□ -1.83
LINC00397-201ENST00000422074 TNFAIP3P21580 790 aa3.6□□□□□ -1.83
LINC00397-201ENST00000422074 GKAP1Q5VSY0 366 aaPredicted RBP3.6□□□□□ -1.83
LINC00397-201ENST00000422074 TMEM198Q66K66 360 aa3.6□□□□□ -1.83
LINC00397-201ENST00000422074 FAAH2Q6GMR7 532 aa3.6□□□□□ -1.83
LINC00397-201ENST00000422074 FAAP20Q6NZ36 180 aa3.6□□□□□ -1.83
LINC00397-201ENST00000422074 LINGO4Q6UY18 593 aa3.6□□□□□ -1.83
LINC00397-201ENST00000422074 RSRC2Q7L4I2 434 aaKnown RBP3.6□□□□□ -1.83
LINC00397-201ENST00000422074 FASTKD5Q7L8L6 764 aaKnown RBP3.6□□□□□ -1.83
LINC00397-201ENST00000422074 TICAM1Q8IUC6 712 aa3.6□□□□□ -1.83
LINC00397-201ENST00000422074 MCEMP1Q8IX19 187 aa3.6□□□□□ -1.83
LINC00397-201ENST00000422074 DDHD1Q8NEL9 900 aa3.6□□□□□ -1.83
LINC00397-201ENST00000422074 ART5Q96L15 291 aa3.6□□□□□ -1.83
LINC00397-201ENST00000422074 LINC00479Q96M42 142 aa3.6□□□□□ -1.83
LINC00397-201ENST00000422074 NCAPGQ9BPX3 1015 aa3.6□□□□□ -1.83
LINC00397-201ENST00000422074 PELI2Q9HAT8 420 aa3.6□□□□□ -1.83
LINC00397-201ENST00000422074 ZNF71Q9NQZ8 489 aaPredicted RBP3.6□□□□□ -1.83
LINC00397-201ENST00000422074 BARHL2Q9NY43 387 aa3.6□□□□□ -1.83
LINC00397-201ENST00000422074 CMAHPQ9Y471 501 aa3.6□□□□□ -1.83
LINC00397-201ENST00000422074 ASTN2O75129 1339 aaPredicted RBP3.6□□□□□ -1.83
LINC00397-201ENST00000422074 TDRD15B5MCY1 1934 aaKnown RBP3.6□□□□□ -1.83
LINC00397-201ENST00000422074 A0A087X0M5 115 aa3.59□□□□□ -1.83
LINC00397-201ENST00000422074 A0A1B0GX30 115 aa3.59□□□□□ -1.83
LINC00397-201ENST00000422074 A0A1W2PR77 199 aa3.59□□□□□ -1.83
LINC00397-201ENST00000422074 CDRT15L2A8MXV6 281 aa3.59□□□□□ -1.83
LINC00397-201ENST00000422074 HS6ST1O60243 411 aa3.59□□□□□ -1.83
LINC00397-201ENST00000422074 SCGB1D1O95968 90 aa3.59□□□□□ -1.83
LINC00397-201ENST00000422074 GH2P01242 217 aa3.59□□□□□ -1.83
LINC00397-201ENST00000422074 SRPRAP08240 638 aaKnown RBP3.59□□□□□ -1.83
LINC00397-201ENST00000422074 RARGP13631 454 aa3.59□□□□□ -1.83
LINC00397-201ENST00000422074 CBLP22681 906 aa3.59□□□□□ -1.83
LINC00397-201ENST00000422074 MAP2K2P36507 400 aa3.59□□□□□ -1.83
LINC00397-201ENST00000422074 TMEM187Q14656 261 aa3.59□□□□□ -1.83
LINC00397-201ENST00000422074 CTU2Q2VPK5 515 aaKnown RBP3.59□□□□□ -1.83
LINC00397-201ENST00000422074 ZSCAN23Q3MJ62 389 aa3.59□□□□□ -1.83
LINC00397-201ENST00000422074 ZFP69Q49AA0 526 aa3.59□□□□□ -1.83
LINC00397-201ENST00000422074 SNX30Q5VWJ9 437 aa3.59□□□□□ -1.83
LINC00397-201ENST00000422074 KLHL35Q6PF15 583 aa3.59□□□□□ -1.83
LINC00397-201ENST00000422074 DENND5BQ6ZUT9 1274 aa3.59□□□□□ -1.83
LINC00397-201ENST00000422074 TMTC2Q8N394 836 aa3.59□□□□□ -1.83
LINC00397-201ENST00000422074 ZNF611Q8N823 705 aa3.59□□□□□ -1.83
LINC00397-201ENST00000422074 PPHLN1Q8NEY8 458 aaKnown RBP3.59□□□□□ -1.83
LINC00397-201ENST00000422074 HDAC2Q92769 488 aaKnown RBP3.59□□□□□ -1.83
LINC00397-201ENST00000422074 POM121L2Q96KW2 1035 aa3.59□□□□□ -1.83
LINC00397-201ENST00000422074 RHNO1Q9BSD3 238 aa3.59□□□□□ -1.83
LINC00397-201ENST00000422074 ITPAQ9BY32 194 aa3.59□□□□□ -1.83
LINC00397-201ENST00000422074 PNMA2Q9UL42 364 aa3.59□□□□□ -1.83
LINC00397-201ENST00000422074 EXO1Q9UQ84 846 aaKnown RBP3.59□□□□□ -1.83
LINC00397-201ENST00000422074 PYGO1Q9Y3Y4 419 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms