RNA–Protein interactions for RNA: ENST00000421939.5

CDK9-202, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-202ENST00000421939 C16orf72Q14CZ0 275 aa25.88■■□□□ 1.73
CDK9-202ENST00000421939 TMEM71Q6P5X7 295 aa25.88■■□□□ 1.73
CDK9-202ENST00000421939 WDR74Q6RFH5 385 aaPredicted RBP25.88■■□□□ 1.73
CDK9-202ENST00000421939 RBM12BQ8IXT5 1001 aaKnown RBP25.88■■□□□ 1.73
CDK9-202ENST00000421939 HM13Q8TCT9 377 aa25.88■■□□□ 1.73
CDK9-202ENST00000421939 IL22Q9GZX6 179 aa25.88■■□□□ 1.73
CDK9-202ENST00000421939 BFARQ9NZS9 450 aa25.88■■□□□ 1.73
CDK9-202ENST00000421939 AKAP7Q9P0M2 348 aaPredicted RBP25.88■■□□□ 1.73
CDK9-202ENST00000421939 PISDQ9UG56 409 aa25.88■■□□□ 1.73
CDK9-202ENST00000421939 ACSL5Q9ULC5 683 aa25.88■■□□□ 1.73
CDK9-202ENST00000421939 PSMD13Q9UNM6 376 aa25.88■■□□□ 1.73
CDK9-202ENST00000421939 ITPR1Q14643 2758 aa25.87■■□□□ 1.73
CDK9-202ENST00000421939 TCRBV7S3A2A0A539 114 aa25.87■■□□□ 1.73
CDK9-202ENST00000421939 AGRPO00253 132 aa25.87■■□□□ 1.73
CDK9-202ENST00000421939 HGSO14964 777 aaPredicted RBP25.87■■□□□ 1.73
CDK9-202ENST00000421939 GOT2P00505 430 aaKnown RBP25.87■■□□□ 1.73
CDK9-202ENST00000421939 MPSTP25325 297 aa25.87■■□□□ 1.73
CDK9-202ENST00000421939 MAGEA6P43360 314 aa25.87■■□□□ 1.73
CDK9-202ENST00000421939 FNTAP49354 379 aa25.87■■□□□ 1.73
CDK9-202ENST00000421939 ITIH4Q14624 930 aa25.87■■□□□ 1.73
CDK9-202ENST00000421939 KCNJ11Q14654 390 aa25.87■■□□□ 1.73
CDK9-202ENST00000421939 RPE65Q16518 533 aa25.87■■□□□ 1.73
CDK9-202ENST00000421939 PCID2Q5JVF3 399 aa25.87■■□□□ 1.73
CDK9-202ENST00000421939 XKR5Q6UX68 686 aa25.87■■□□□ 1.73
CDK9-202ENST00000421939 ZNF534Q76KX8 674 aa25.87■■□□□ 1.73
CDK9-202ENST00000421939 CLEC14AQ86T13 490 aa25.87■■□□□ 1.73
CDK9-202ENST00000421939 RCBTB1Q8NDN9 531 aa25.87■■□□□ 1.73
CDK9-202ENST00000421939 NCSTNQ92542 709 aa25.87■■□□□ 1.73
CDK9-202ENST00000421939 VPS37BQ9H9H4 285 aa25.87■■□□□ 1.73
CDK9-202ENST00000421939 SLC40A1Q9NP59 571 aa25.87■■□□□ 1.73
CDK9-202ENST00000421939 ZFHX4Q86UP3 3567 aa25.86■■□□□ 1.73
CDK9-202ENST00000421939 PRAMEF33A0A0G2JMD5 474 aa25.86■■□□□ 1.73
CDK9-202ENST00000421939 RRP8O43159 456 aaKnown RBP25.86■■□□□ 1.73
CDK9-202ENST00000421939 NPY2RP49146 381 aa25.86■■□□□ 1.73
CDK9-202ENST00000421939 TERF1P54274 439 aa25.86■■□□□ 1.73
CDK9-202ENST00000421939 PRAMEP78395 509 aa25.86■■□□□ 1.73
CDK9-202ENST00000421939 CRADDP78560 199 aa25.86■■□□□ 1.73
CDK9-202ENST00000421939 CCDC173Q0VFZ6 552 aa25.86■■□□□ 1.73
CDK9-202ENST00000421939 LRRC8BQ6P9F7 803 aa25.86■■□□□ 1.73
CDK9-202ENST00000421939 CLDN19Q8N6F1 224 aa25.86■■□□□ 1.73
CDK9-202ENST00000421939 ZNF248Q8NDW4 579 aa25.86■■□□□ 1.73
CDK9-202ENST00000421939 GPR150Q8NGU9 434 aa25.86■■□□□ 1.73
CDK9-202ENST00000421939 OR6P1Q8NGX9 317 aa25.86■■□□□ 1.73
CDK9-202ENST00000421939 CHRAC1Q9NRG0 131 aa25.86■■□□□ 1.73
CDK9-202ENST00000421939 PDP2Q9P2J9 529 aa25.86■■□□□ 1.73
CDK9-202ENST00000421939 AP2A2O94973 939 aa25.85■■□□□ 1.73
CDK9-202ENST00000421939 SLC35G4P0C7Q5 338 aa25.85■■□□□ 1.73
CDK9-202ENST00000421939 NSG1P42857 185 aa25.85■■□□□ 1.73
CDK9-202ENST00000421939 GPR18Q14330 331 aa25.85■■□□□ 1.73
CDK9-202ENST00000421939 PACS1Q6VY07 963 aa25.85■■□□□ 1.73
CDK9-202ENST00000421939 LILRA3Q8N6C8 439 aaPredicted RBP25.85■■□□□ 1.73
CDK9-202ENST00000421939 OR4L1Q8NH43 312 aa25.85■■□□□ 1.73
CDK9-202ENST00000421939 GRK7Q8WTQ7 553 aa25.85■■□□□ 1.73
CDK9-202ENST00000421939 WWP1Q9H0M0 922 aa25.85■■□□□ 1.73
CDK9-202ENST00000421939 IMP3Q9NV31 184 aaKnown RBP25.85■■□□□ 1.73
CDK9-202ENST00000421939 NEU2Q9Y3R4 380 aa25.85■■□□□ 1.73
CDK9-202ENST00000421939 C17orf113A0A1B0GUU1 675 aa25.84■■□□□ 1.73
CDK9-202ENST00000421939 UBXN7O94888 489 aa25.84■■□□□ 1.73
CDK9-202ENST00000421939 MTHFD1P11586 935 aaKnown RBP25.84■■□□□ 1.73
CDK9-202ENST00000421939 ITIH1P19827 911 aa25.84■■□□□ 1.73
CDK9-202ENST00000421939 MGAT1P26572 445 aa25.84■■□□□ 1.73
CDK9-202ENST00000421939 SARNPP82979 210 aaKnown RBP25.84■■□□□ 1.73
CDK9-202ENST00000421939 LYPLAL1Q5VWZ2 237 aa25.84■■□□□ 1.73
CDK9-202ENST00000421939 LRRC69Q6ZNQ3 347 aa25.84■■□□□ 1.73
CDK9-202ENST00000421939 CFAP206Q8IYR0 622 aa25.84■■□□□ 1.73
CDK9-202ENST00000421939 SGSM3Q96HU1 749 aa25.84■■□□□ 1.73
CDK9-202ENST00000421939 RMDN2Q96LZ7 410 aa25.84■■□□□ 1.73
CDK9-202ENST00000421939 TTC1Q99614 292 aa25.84■■□□□ 1.73
CDK9-202ENST00000421939 NAPGQ99747 312 aaPredicted RBP25.84■■□□□ 1.73
CDK9-202ENST00000421939 CCM2Q9BSQ5 444 aa25.84■■□□□ 1.73
CDK9-202ENST00000421939 COG4Q9H9E3 785 aa25.84■■□□□ 1.73
CDK9-202ENST00000421939 OGFRQ9NZT2 677 aa25.84■■□□□ 1.73
CDK9-202ENST00000421939 PCDHGA7Q9Y5G6 932 aa25.84■■□□□ 1.73
CDK9-202ENST00000421939 CFAP20Q9Y6A4 193 aaKnown RBP25.84■■□□□ 1.73
CDK9-202ENST00000421939 CHD6Q8TD26 2715 aa25.83■■□□□ 1.73
CDK9-202ENST00000421939 QSOX1O00391 747 aa25.83■■□□□ 1.73
CDK9-202ENST00000421939 GSTM1P09488 218 aa25.83■■□□□ 1.73
CDK9-202ENST00000421939 TYRP1P17643 537 aa25.83■■□□□ 1.73
CDK9-202ENST00000421939 ETV5P41161 510 aa25.83■■□□□ 1.73
CDK9-202ENST00000421939 GSTM4Q03013 218 aa25.83■■□□□ 1.73
CDK9-202ENST00000421939 SNAP47Q5SQN1 464 aa25.83■■□□□ 1.73
CDK9-202ENST00000421939 ANKRD22Q5VYY1 191 aa25.83■■□□□ 1.73
CDK9-202ENST00000421939 PAPD7Q5XG87 772 aaKnown RBP25.83■■□□□ 1.73
CDK9-202ENST00000421939 CERS6Q6ZMG9 384 aa25.83■■□□□ 1.73
CDK9-202ENST00000421939 JAMLQ86YT9 394 aa25.83■■□□□ 1.73
CDK9-202ENST00000421939 PLXDC1Q8IUK5 500 aa25.83■■□□□ 1.73
CDK9-202ENST00000421939 AGBL5Q8NDL9 886 aa25.83■■□□□ 1.73
CDK9-202ENST00000421939 SPDYE1Q8NFV5 336 aaPredicted RBP25.83■■□□□ 1.73
CDK9-202ENST00000421939 CPT1BQ92523 772 aa25.83■■□□□ 1.73
CDK9-202ENST00000421939 C12orf66Q96MD2 445 aa25.83■■□□□ 1.73
CDK9-202ENST00000421939 MRM3Q9HC36 420 aaKnown RBP25.83■■□□□ 1.73
CDK9-202ENST00000421939 TREX1Q9NSU2 369 aa25.83■■□□□ 1.73
CDK9-202ENST00000421939 SYBUQ9NX95 663 aa25.83■■□□□ 1.73
CDK9-202ENST00000421939 MN1Q10571 1320 aaPredicted RBP25.83■■□□□ 1.73
CDK9-202ENST00000421939 TMEM63AO94886 807 aa25.82■■□□□ 1.72
CDK9-202ENST00000421939 POLBP06746 335 aa25.82■■□□□ 1.72
CDK9-202ENST00000421939 AMD1P17707 334 aa25.82■■□□□ 1.72
CDK9-202ENST00000421939 CSTF2P33240 577 aaKnown RBP eCLIP25.82■■□□□ 1.72
CDK9-202ENST00000421939 ABCG1P45844 678 aa25.82■■□□□ 1.72
CDK9-202ENST00000421939 CAPZBP47756 277 aa25.82■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms