RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 PPANQ9NQ55 473 aaKnown RBP15.46■□□□□ 0.07
BRAT1-202ENST00000421712 SCHIP1Q9P0W5 487 aaPredicted RBP15.46■□□□□ 0.07
BRAT1-202ENST00000421712 CPNE7Q9UBL6 633 aa15.46■□□□□ 0.07
BRAT1-202ENST00000421712 ZC3H7BQ9UGR2 993 aaKnown RBP15.46■□□□□ 0.07
BRAT1-202ENST00000421712 ACSL5Q9ULC5 683 aa15.46■□□□□ 0.07
BRAT1-202ENST00000421712 FAM169AQ9Y6X4 670 aa15.46■□□□□ 0.07
BRAT1-202ENST00000421712 ZCWPW2A0A1B0GU75 182 aa15.45■□□□□ 0.06
BRAT1-202ENST00000421712 C17orf113A0A1B0GUU1 675 aa15.45■□□□□ 0.06
BRAT1-202ENST00000421712 FAM149AA5PLN7 773 aa15.45■□□□□ 0.06
BRAT1-202ENST00000421712 A6NCN8 305 aa15.45■□□□□ 0.06
BRAT1-202ENST00000421712 OR52A4PA6NMU1 304 aa15.45■□□□□ 0.06
BRAT1-202ENST00000421712 PRMT5O14744 637 aaPredicted RBP15.45■□□□□ 0.06
BRAT1-202ENST00000421712 MT-CO3P00414 261 aa15.45■□□□□ 0.06
BRAT1-202ENST00000421712 RPLP0P05388 317 aaKnown RBP15.45■□□□□ 0.06
BRAT1-202ENST00000421712 SLC35G4P0C7Q5 338 aa15.45■□□□□ 0.06
BRAT1-202ENST00000421712 PNLIPP16233 465 aa15.45■□□□□ 0.06
BRAT1-202ENST00000421712 EIF3BP55884 814 aaKnown RBP15.45■□□□□ 0.06
BRAT1-202ENST00000421712 OR1D5P58170 312 aa15.45■□□□□ 0.06
BRAT1-202ENST00000421712 CAV1Q03135 178 aa15.45■□□□□ 0.06
BRAT1-202ENST00000421712 SPIDRQ14159 915 aa15.45■□□□□ 0.06
BRAT1-202ENST00000421712 KRT33BQ14525 404 aa15.45■□□□□ 0.06
BRAT1-202ENST00000421712 CLCA4Q14CN2 919 aa15.45■□□□□ 0.06
BRAT1-202ENST00000421712 SPANXN3Q5MJ09 141 aa15.45■□□□□ 0.06
BRAT1-202ENST00000421712 RNF187Q5TA31 235 aaPredicted RBP15.45■□□□□ 0.06
BRAT1-202ENST00000421712 AGAP9Q5VTM2 703 aa15.45■□□□□ 0.06
BRAT1-202ENST00000421712 ZNF470Q6ECI4 717 aa15.45■□□□□ 0.06
BRAT1-202ENST00000421712 ABRAXAS1Q6UWZ7 409 aa15.45■□□□□ 0.06
BRAT1-202ENST00000421712 WASH2PQ6VEQ5 465 aa15.45■□□□□ 0.06
BRAT1-202ENST00000421712 TMPRSS12Q86WS5 348 aa15.45■□□□□ 0.06
BRAT1-202ENST00000421712 ZNF761Q86XN6 746 aaPredicted RBP15.45■□□□□ 0.06
BRAT1-202ENST00000421712 IGDCC3Q8IVU1 814 aa15.45■□□□□ 0.06
BRAT1-202ENST00000421712 MMGT1Q8N4V1 131 aa15.45■□□□□ 0.06
BRAT1-202ENST00000421712 AVL9Q8NBF6 648 aa15.45■□□□□ 0.06
BRAT1-202ENST00000421712 GABPB2Q8TAK5 448 aaPredicted RBP15.45■□□□□ 0.06
BRAT1-202ENST00000421712 CALML6Q8TD86 181 aa15.45■□□□□ 0.06
BRAT1-202ENST00000421712 LRRC39Q96DD0 335 aa15.45■□□□□ 0.06
BRAT1-202ENST00000421712 AHCYL2Q96HN2 611 aaKnown RBP15.45■□□□□ 0.06
BRAT1-202ENST00000421712 GFM1Q96RP9 751 aaKnown RBP15.45■□□□□ 0.06
BRAT1-202ENST00000421712 TCF12Q99081 682 aa15.45■□□□□ 0.06
BRAT1-202ENST00000421712 SCNM1Q9BWG6 230 aa15.45■□□□□ 0.06
BRAT1-202ENST00000421712 CARD6Q9BX69 1037 aa15.45■□□□□ 0.06
BRAT1-202ENST00000421712 WWP1Q9H0M0 922 aa15.45■□□□□ 0.06
BRAT1-202ENST00000421712 LRRN3Q9H3W5 708 aa15.45■□□□□ 0.06
BRAT1-202ENST00000421712 SARS2Q9NP81 518 aaKnown RBP15.45■□□□□ 0.06
BRAT1-202ENST00000421712 WASH6PQ9NQA3 447 aa15.45■□□□□ 0.06
BRAT1-202ENST00000421712 IARS2Q9NSE4 1012 aaKnown RBP15.45■□□□□ 0.06
BRAT1-202ENST00000421712 KCNK4Q9NYG8 393 aa15.45■□□□□ 0.06
BRAT1-202ENST00000421712 GNPTGQ9UJJ9 305 aa15.45■□□□□ 0.06
BRAT1-202ENST00000421712 CLCA2Q9UQC9 943 aa15.45■□□□□ 0.06
BRAT1-202ENST00000421712 WDR37Q9Y2I8 494 aa15.45■□□□□ 0.06
BRAT1-202ENST00000421712 PIKFYVEQ9Y2I7 2098 aa15.45■□□□□ 0.06
BRAT1-202ENST00000421712 GSTM1P09488 218 aa15.44■□□□□ 0.06
BRAT1-202ENST00000421712 ERVK-10P10266 1014 aa15.44■□□□□ 0.06
BRAT1-202ENST00000421712 BRAFP15056 766 aa15.44■□□□□ 0.06
BRAT1-202ENST00000421712 XRCC1P18887 633 aaPredicted RBP15.44■□□□□ 0.06
BRAT1-202ENST00000421712 OGNP20774 298 aaKnown RBP15.44■□□□□ 0.06
BRAT1-202ENST00000421712 FMO4P31512 558 aa15.44■□□□□ 0.06
BRAT1-202ENST00000421712 SLC19A1P41440 591 aa15.44■□□□□ 0.06
BRAT1-202ENST00000421712 MAPK9P45984 424 aa15.44■□□□□ 0.06
BRAT1-202ENST00000421712 FASLGP48023 281 aa15.44■□□□□ 0.06
BRAT1-202ENST00000421712 CSE1LP55060 971 aaKnown RBP15.44■□□□□ 0.06
BRAT1-202ENST00000421712 GUCY2DQ02846 1103 aa15.44■□□□□ 0.06
BRAT1-202ENST00000421712 GSTM4Q03013 218 aa15.44■□□□□ 0.06
BRAT1-202ENST00000421712 CTBP1Q13363 440 aa15.44■□□□□ 0.06
BRAT1-202ENST00000421712 BOP1Q14137 746 aaKnown RBP15.44■□□□□ 0.06
BRAT1-202ENST00000421712 CRYMQ14894 314 aa15.44■□□□□ 0.06
BRAT1-202ENST00000421712 SYTL3Q4VX76 610 aa15.44■□□□□ 0.06
BRAT1-202ENST00000421712 HSP90AA5PQ58FG0 334 aa15.44■□□□□ 0.06
BRAT1-202ENST00000421712 TMPRSS7Q7RTY8 843 aa15.44■□□□□ 0.06
BRAT1-202ENST00000421712 SPRED1Q7Z699 444 aa15.44■□□□□ 0.06
BRAT1-202ENST00000421712 KCNMB4Q86W47 210 aa15.44■□□□□ 0.06
BRAT1-202ENST00000421712 MARCH9Q86YJ5 346 aa15.44■□□□□ 0.06
BRAT1-202ENST00000421712 CILP2Q8IUL8 1156 aa15.44■□□□□ 0.06
BRAT1-202ENST00000421712 ZBED8Q8IZ13 594 aa15.44■□□□□ 0.06
BRAT1-202ENST00000421712 LILRA3Q8N6C8 439 aaPredicted RBP15.44■□□□□ 0.06
BRAT1-202ENST00000421712 NOA1Q8NC60 698 aaKnown RBP15.44■□□□□ 0.06
BRAT1-202ENST00000421712 GPR150Q8NGU9 434 aa15.44■□□□□ 0.06
BRAT1-202ENST00000421712 WDR48Q8TAF3 677 aa15.44■□□□□ 0.06
BRAT1-202ENST00000421712 C12orf66Q96MD2 445 aa15.44■□□□□ 0.06
BRAT1-202ENST00000421712 FAM167BQ9BTA0 163 aa15.44■□□□□ 0.06
BRAT1-202ENST00000421712 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.44■□□□□ 0.06
BRAT1-202ENST00000421712 COG4Q9H9E3 785 aa15.44■□□□□ 0.06
BRAT1-202ENST00000421712 EPB41L5Q9HCM4 733 aa15.44■□□□□ 0.06
BRAT1-202ENST00000421712 IMP3Q9NV31 184 aaKnown RBP15.44■□□□□ 0.06
BRAT1-202ENST00000421712 GRHL1Q9NZI5 618 aa15.44■□□□□ 0.06
BRAT1-202ENST00000421712 ZNF624Q9P2J8 865 aaPredicted RBP15.44■□□□□ 0.06
BRAT1-202ENST00000421712 KLK13Q9UKR3 277 aa15.44■□□□□ 0.06
BRAT1-202ENST00000421712 ANGPTL2Q9UKU9 493 aa15.44■□□□□ 0.06
BRAT1-202ENST00000421712 VPS9D1Q9Y2B5 631 aa15.44■□□□□ 0.06
BRAT1-202ENST00000421712 CRYL1Q9Y2S2 319 aa15.44■□□□□ 0.06
BRAT1-202ENST00000421712 CFAP20Q9Y6A4 193 aaKnown RBP15.44■□□□□ 0.06
BRAT1-202ENST00000421712 UNC13CQ8NB66 2214 aa15.43■□□□□ 0.06
BRAT1-202ENST00000421712 ESYT3A0FGR9 886 aa15.43■□□□□ 0.06
BRAT1-202ENST00000421712 IQCF5A8MTL0 148 aa15.43■□□□□ 0.06
BRAT1-202ENST00000421712 IFRD1O00458 451 aaPredicted RBP15.43■□□□□ 0.06
BRAT1-202ENST00000421712 TP73O15350 636 aa15.43■□□□□ 0.06
BRAT1-202ENST00000421712 B4GAT1O43505 415 aa15.43■□□□□ 0.06
BRAT1-202ENST00000421712 GPR3P46089 330 aa15.43■□□□□ 0.06
BRAT1-202ENST00000421712 PREPP48147 710 aa15.43■□□□□ 0.06
BRAT1-202ENST00000421712 FOXK2Q01167 660 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms