RNA–Protein interactions for RNA: ENST00000420996.2

UPF3AP3-201, Transcript of UPF3A pseudogene 3, humanhuman

BASIC

Gene UPF3AP3, Length 769 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP3-201ENST00000420996 UGT1A7Q9HAW7 530 aa16.47■□□□□ 0.23
UPF3AP3-201ENST00000420996 UGT1A10Q9HAW8 530 aa16.47■□□□□ 0.23
UPF3AP3-201ENST00000420996 UGT1A8Q9HAW9 530 aa16.47■□□□□ 0.23
UPF3AP3-201ENST00000420996 LATS2Q9NRM7 1088 aa16.47■□□□□ 0.23
UPF3AP3-201ENST00000420996 HRASLS2Q9NWW9 162 aa16.47■□□□□ 0.23
UPF3AP3-201ENST00000420996 UBP1Q9NZI7 540 aa16.47■□□□□ 0.23
UPF3AP3-201ENST00000420996 IL17CQ9P0M4 197 aa16.47■□□□□ 0.23
UPF3AP3-201ENST00000420996 FAM153AQ9UHL3 310 aa16.47■□□□□ 0.23
UPF3AP3-201ENST00000420996 PCDHGB7Q9Y5F8 929 aa16.47■□□□□ 0.23
UPF3AP3-201ENST00000420996 SPTAN1Q13813 2472 aaKnown RBP16.47■□□□□ 0.23
UPF3AP3-201ENST00000420996 UTP20O75691 2785 aaKnown RBP16.47■□□□□ 0.23
UPF3AP3-201ENST00000420996 ESPL1Q14674 2120 aa16.46■□□□□ 0.23
UPF3AP3-201ENST00000420996 NBPF19A0A087WUL8 3843 aa16.46■□□□□ 0.23
UPF3AP3-201ENST00000420996 ARGFXA6NJG6 315 aa16.46■□□□□ 0.23
UPF3AP3-201ENST00000420996 SORBS2O94875 1100 aaKnown RBP16.46■□□□□ 0.23
UPF3AP3-201ENST00000420996 ZBTB11O95625 1053 aaPredicted RBP16.46■□□□□ 0.23
UPF3AP3-201ENST00000420996 TMEM253P0C7T8 217 aa16.46■□□□□ 0.23
UPF3AP3-201ENST00000420996 HNRNPH3P31942 346 aaKnown RBP16.46■□□□□ 0.23
UPF3AP3-201ENST00000420996 ANP32AP39687 249 aaKnown RBP16.46■□□□□ 0.23
UPF3AP3-201ENST00000420996 WNT3AP56704 352 aa16.46■□□□□ 0.23
UPF3AP3-201ENST00000420996 GPS2Q13227 327 aa16.46■□□□□ 0.23
UPF3AP3-201ENST00000420996 NOMO1Q15155 1222 aa16.46■□□□□ 0.23
UPF3AP3-201ENST00000420996 GPR19Q15760 415 aa16.46■□□□□ 0.23
UPF3AP3-201ENST00000420996 SIRPB2Q5JXA9 342 aa16.46■□□□□ 0.23
UPF3AP3-201ENST00000420996 IZUMO3Q5VZ72 239 aa16.46■□□□□ 0.23
UPF3AP3-201ENST00000420996 KDELC1Q6UW63 502 aa16.46■□□□□ 0.23
UPF3AP3-201ENST00000420996 FAM151BQ6UXP7 276 aa16.46■□□□□ 0.23
UPF3AP3-201ENST00000420996 OOSP2Q86WS3 158 aa16.46■□□□□ 0.23
UPF3AP3-201ENST00000420996 RFX6Q8HWS3 928 aa16.46■□□□□ 0.23
UPF3AP3-201ENST00000420996 TMEM126BQ8IUX1 230 aa16.46■□□□□ 0.23
UPF3AP3-201ENST00000420996 CARFQ8N187 725 aa16.46■□□□□ 0.23
UPF3AP3-201ENST00000420996 ZNF501Q96CX3 271 aaPredicted RBP16.46■□□□□ 0.23
UPF3AP3-201ENST00000420996 LRFN5Q96NI6 719 aa16.46■□□□□ 0.23
UPF3AP3-201ENST00000420996 IMP3Q9NV31 184 aaKnown RBP16.46■□□□□ 0.23
UPF3AP3-201ENST00000420996 CUEDC1Q9NWM3 386 aaPredicted RBP16.46■□□□□ 0.23
UPF3AP3-201ENST00000420996 HACD3Q9P035 362 aa16.46■□□□□ 0.23
UPF3AP3-201ENST00000420996 ZNF451Q9Y4E5 1061 aa16.46■□□□□ 0.23
UPF3AP3-201ENST00000420996 CFAP20Q9Y6A4 193 aaKnown RBP16.46■□□□□ 0.23
UPF3AP3-201ENST00000420996 TEX15Q9BXT5 2789 aa16.45■□□□□ 0.22
UPF3AP3-201ENST00000420996 SPENQ96T58 3664 aaKnown RBP16.45■□□□□ 0.22
UPF3AP3-201ENST00000420996 OR2AG2A6NM03 316 aa16.45■□□□□ 0.22
UPF3AP3-201ENST00000420996 CEACAM4O75871 244 aa16.45■□□□□ 0.22
UPF3AP3-201ENST00000420996 KRT1P04264 644 aa16.45■□□□□ 0.22
UPF3AP3-201ENST00000420996 KLK3P07288 261 aaPredicted RBP16.45■□□□□ 0.22
UPF3AP3-201ENST00000420996 CD68P34810 354 aaPredicted RBP16.45■□□□□ 0.22
UPF3AP3-201ENST00000420996 ARHGAP25P42331 645 aa16.45■□□□□ 0.22
UPF3AP3-201ENST00000420996 TNNT3P45378 269 aaPredicted RBP16.45■□□□□ 0.22
UPF3AP3-201ENST00000420996 GSDMDP57764 484 aa16.45■□□□□ 0.22
UPF3AP3-201ENST00000420996 XRCC4Q13426 336 aa16.45■□□□□ 0.22
UPF3AP3-201ENST00000420996 ITGA9Q13797 1035 aa16.45■□□□□ 0.22
UPF3AP3-201ENST00000420996 PRKD1Q15139 912 aaPredicted RBP16.45■□□□□ 0.22
UPF3AP3-201ENST00000420996 PPP2R5EQ16537 467 aa16.45■□□□□ 0.22
UPF3AP3-201ENST00000420996 TMTC4Q5T4D3 741 aa16.45■□□□□ 0.22
UPF3AP3-201ENST00000420996 GPRC6AQ5T6X5 926 aa16.45■□□□□ 0.22
UPF3AP3-201ENST00000420996 LRRC38Q5VT99 294 aa16.45■□□□□ 0.22
UPF3AP3-201ENST00000420996 ARMC6Q6NXE6 501 aa16.45■□□□□ 0.22
UPF3AP3-201ENST00000420996 BZW1Q7L1Q6 419 aaKnown RBP16.45■□□□□ 0.22
UPF3AP3-201ENST00000420996 BEND7Q8N7W2 519 aaPredicted RBP16.45■□□□□ 0.22
UPF3AP3-201ENST00000420996 SLC38A9Q8NBW4 561 aa16.45■□□□□ 0.22
UPF3AP3-201ENST00000420996 SLC35G2Q8TBE7 412 aa16.45■□□□□ 0.22
UPF3AP3-201ENST00000420996 ADAMTS17Q8TE56 1095 aa16.45■□□□□ 0.22
UPF3AP3-201ENST00000420996 INSM2Q96T92 566 aaPredicted RBP16.45■□□□□ 0.22
UPF3AP3-201ENST00000420996 CHST8Q9H2A9 424 aa16.45■□□□□ 0.22
UPF3AP3-201ENST00000420996 PKP3Q9Y446 797 aa16.45■□□□□ 0.22
UPF3AP3-201ENST00000420996 GLYATL1P3A0A0U1RQE8 302 aa16.44■□□□□ 0.22
UPF3AP3-201ENST00000420996 OR6C74A6NCV1 312 aa16.44■□□□□ 0.22
UPF3AP3-201ENST00000420996 MGAT4DA6NG13 374 aa16.44■□□□□ 0.22
UPF3AP3-201ENST00000420996 GPR39O43194 453 aa16.44■□□□□ 0.22
UPF3AP3-201ENST00000420996 SEMA7AO75326 666 aa16.44■□□□□ 0.22
UPF3AP3-201ENST00000420996 RAB40ALP0C0E4 278 aa16.44■□□□□ 0.22
UPF3AP3-201ENST00000420996 PBLDP30039 288 aaPredicted RBP16.44■□□□□ 0.22
UPF3AP3-201ENST00000420996 CA5AP35218 305 aa16.44■□□□□ 0.22
UPF3AP3-201ENST00000420996 PTGIRP43119 386 aa16.44■□□□□ 0.22
UPF3AP3-201ENST00000420996 NR2C2P49116 596 aa16.44■□□□□ 0.22
UPF3AP3-201ENST00000420996 DYNLT1P63172 113 aa16.44■□□□□ 0.22
UPF3AP3-201ENST00000420996 WASHC5Q12768 1159 aa16.44■□□□□ 0.22
UPF3AP3-201ENST00000420996 ASTE1Q2TB18 679 aaPredicted RBP16.44■□□□□ 0.22
UPF3AP3-201ENST00000420996 ODF2Q5BJF6 829 aa16.44■□□□□ 0.22
UPF3AP3-201ENST00000420996 PLEKHS1Q5SXH7 462 aa16.44■□□□□ 0.22
UPF3AP3-201ENST00000420996 CAVIN1Q6NZI2 390 aaKnown RBP16.44■□□□□ 0.22
UPF3AP3-201ENST00000420996 LUZP1Q86V48 1076 aa16.44■□□□□ 0.22
UPF3AP3-201ENST00000420996 HPS6Q86YV9 775 aa16.44■□□□□ 0.22
UPF3AP3-201ENST00000420996 DSELQ8IZU8 1212 aa16.44■□□□□ 0.22
UPF3AP3-201ENST00000420996 SLC25A41Q8N5S1 370 aa16.44■□□□□ 0.22
UPF3AP3-201ENST00000420996 TFB1MQ8WVM0 346 aaKnown RBP16.44■□□□□ 0.22
UPF3AP3-201ENST00000420996 RNF25Q96BH1 459 aaPredicted RBP16.44■□□□□ 0.22
UPF3AP3-201ENST00000420996 C12orf66Q96MD2 445 aa16.44■□□□□ 0.22
UPF3AP3-201ENST00000420996 WWP1Q9H0M0 922 aa16.44■□□□□ 0.22
UPF3AP3-201ENST00000420996 KIR3DX1Q9H7L2 352 aa16.44■□□□□ 0.22
UPF3AP3-201ENST00000420996 SMOXQ9NWM0 555 aa16.44■□□□□ 0.22
UPF3AP3-201ENST00000420996 SLC24A2Q9UI40 661 aa16.44■□□□□ 0.22
UPF3AP3-201ENST00000420996 ACSL5Q9ULC5 683 aa16.44■□□□□ 0.22
UPF3AP3-201ENST00000420996 BTRCQ9Y297 605 aa16.44■□□□□ 0.22
UPF3AP3-201ENST00000420996 RP1L1Q8IWN7 2480 aaPredicted RBP16.44■□□□□ 0.22
UPF3AP3-201ENST00000420996 SSU72P8A0A1W2PR75 194 aa16.43■□□□□ 0.22
UPF3AP3-201ENST00000420996 KLHL33A6NCF5 533 aa16.43■□□□□ 0.22
UPF3AP3-201ENST00000420996 MEN1O00255 615 aa16.43■□□□□ 0.22
UPF3AP3-201ENST00000420996 GAPDHSO14556 408 aaPredicted RBP16.43■□□□□ 0.22
UPF3AP3-201ENST00000420996 DPM1O60762 260 aa16.43■□□□□ 0.22
UPF3AP3-201ENST00000420996 NFKB1P19838 968 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms