RNA–Protein interactions for RNA: ENST00000420794.2

BDNF-209, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,176 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-209ENST00000420794 USP30Q70CQ3 517 aa7.3□□□□□ -1.24
BDNF-209ENST00000420794 HM13Q8TCT9 377 aa7.3□□□□□ -1.24
BDNF-209ENST00000420794 TRPC4APQ8TEL6 797 aa7.3□□□□□ -1.24
BDNF-209ENST00000420794 TUBGCP3Q96CW5 907 aa7.3□□□□□ -1.24
BDNF-209ENST00000420794 C7orf26Q96N11 449 aa7.3□□□□□ -1.24
BDNF-209ENST00000420794 SLCO1B3Q9NPD5 702 aa7.3□□□□□ -1.24
BDNF-209ENST00000420794 SUFUQ9UMX1 484 aa7.3□□□□□ -1.24
BDNF-209ENST00000420794 OTOL1A6NHN0 477 aaPredicted RBP7.29□□□□□ -1.24
BDNF-209ENST00000420794 STK16O75716 305 aa7.29□□□□□ -1.24
BDNF-209ENST00000420794 RASGRP1O95267 797 aa7.29□□□□□ -1.24
BDNF-209ENST00000420794 SLC2A4P14672 509 aa7.29□□□□□ -1.24
BDNF-209ENST00000420794 NUDT1P36639 197 aa7.29□□□□□ -1.24
BDNF-209ENST00000420794 ALDH18A1P54886 795 aaKnown RBP7.29□□□□□ -1.24
BDNF-209ENST00000420794 AP1S2P56377 157 aa7.29□□□□□ -1.24
BDNF-209ENST00000420794 RPS14P62263 151 aaKnown RBP7.29□□□□□ -1.24
BDNF-209ENST00000420794 PTPRRQ15256 657 aa7.29□□□□□ -1.24
BDNF-209ENST00000420794 SGO1Q5FBB7 561 aa7.29□□□□□ -1.24
BDNF-209ENST00000420794 TMEM196Q5HYL7 178 aa7.29□□□□□ -1.24
BDNF-209ENST00000420794 TRPM8Q7Z2W7 1104 aa7.29□□□□□ -1.24
BDNF-209ENST00000420794 CEP97Q8IW35 865 aa7.29□□□□□ -1.24
BDNF-209ENST00000420794 TEX9Q8N6V9 391 aa7.29□□□□□ -1.24
BDNF-209ENST00000420794 IL17RCQ8NAC3 791 aa7.29□□□□□ -1.24
BDNF-209ENST00000420794 RAD51AP1Q96B01 352 aa7.29□□□□□ -1.24
BDNF-209ENST00000420794 OLFM1Q99784 485 aa7.29□□□□□ -1.24
BDNF-209ENST00000420794 GATA5Q9BWX5 397 aaPredicted RBP7.29□□□□□ -1.24
BDNF-209ENST00000420794 TMEM245Q9H330 911 aa7.29□□□□□ -1.24
BDNF-209ENST00000420794 CARS2Q9HA77 564 aaKnown RBP7.29□□□□□ -1.24
BDNF-209ENST00000420794 KCNK4Q9NYG8 393 aa7.29□□□□□ -1.24
BDNF-209ENST00000420794 FZD4Q9ULV1 537 aa7.29□□□□□ -1.24
BDNF-209ENST00000420794 KCNE2Q9Y6J6 123 aa7.29□□□□□ -1.24
BDNF-209ENST00000420794 PATJQ8NI35 1801 aa7.29□□□□□ -1.24
BDNF-209ENST00000420794 UBXN8O00124 270 aa7.29□□□□□ -1.24
BDNF-209ENST00000420794 EIF3FO00303 357 aaPredicted RBP7.29□□□□□ -1.24
BDNF-209ENST00000420794 SNX3O60493 162 aa7.29□□□□□ -1.24
BDNF-209ENST00000420794 APBB3O95704 486 aa7.29□□□□□ -1.24
BDNF-209ENST00000420794 LHCGRP22888 699 aa7.29□□□□□ -1.24
BDNF-209ENST00000420794 CXCL12P48061 93 aa7.29□□□□□ -1.24
BDNF-209ENST00000420794 CDKN2DP55273 166 aa7.29□□□□□ -1.24
BDNF-209ENST00000420794 IRF8Q02556 426 aa7.29□□□□□ -1.24
BDNF-209ENST00000420794 TEAD4Q15561 434 aa7.29□□□□□ -1.24
BDNF-209ENST00000420794 TRIM74Q86UV6 250 aa7.29□□□□□ -1.24
BDNF-209ENST00000420794 HID1Q8IV36 788 aa7.29□□□□□ -1.24
BDNF-209ENST00000420794 RHEBL1Q8TAI7 183 aa7.29□□□□□ -1.24
BDNF-209ENST00000420794 N4BP2L2Q92802 583 aaPredicted RBP7.29□□□□□ -1.24
BDNF-209ENST00000420794 KLHL29Q96CT2 875 aa7.29□□□□□ -1.24
BDNF-209ENST00000420794 RAB3IPQ96QF0 476 aaPredicted RBP7.29□□□□□ -1.24
BDNF-209ENST00000420794 FERD3LQ96RJ6 166 aa7.29□□□□□ -1.24
BDNF-209ENST00000420794 FAM129BQ96TA1 746 aa7.29□□□□□ -1.24
BDNF-209ENST00000420794 GPR174Q9BXC1 333 aa7.29□□□□□ -1.24
BDNF-209ENST00000420794 TMEM120AQ9BXJ8 343 aa7.29□□□□□ -1.24
BDNF-209ENST00000420794 ACTR5Q9H9F9 607 aaPredicted RBP7.29□□□□□ -1.24
BDNF-209ENST00000420794 IMP3Q9NV31 184 aaKnown RBP7.29□□□□□ -1.24
BDNF-209ENST00000420794 OXSMQ9NWU1 459 aa7.29□□□□□ -1.24
BDNF-209ENST00000420794 HEY2Q9UBP5 337 aa7.29□□□□□ -1.24
BDNF-209ENST00000420794 SARDHQ9UL12 918 aa7.29□□□□□ -1.24
BDNF-209ENST00000420794 TMEM98Q9Y2Y6 226 aa7.29□□□□□ -1.24
BDNF-209ENST00000420794 PPIL1Q9Y3C6 166 aa7.29□□□□□ -1.24
BDNF-209ENST00000420794 COLEC10Q9Y6Z7 277 aa7.29□□□□□ -1.24
BDNF-209ENST00000420794 KANSL1LA0AUZ9 987 aa7.29□□□□□ -1.24
BDNF-209ENST00000420794 HDAC3O15379 428 aa7.29□□□□□ -1.24
BDNF-209ENST00000420794 FFAR2O15552 330 aa7.29□□□□□ -1.24
BDNF-209ENST00000420794 AP1G1O43747 822 aa7.29□□□□□ -1.24
BDNF-209ENST00000420794 ENO2P09104 434 aaPredicted RBP7.29□□□□□ -1.24
BDNF-209ENST00000420794 HNRNPA2B1P22626 353 aaKnown RBP7.29□□□□□ -1.24
BDNF-209ENST00000420794 ARNTP27540 789 aa7.29□□□□□ -1.24
BDNF-209ENST00000420794 RGS19P49795 217 aa7.29□□□□□ -1.24
BDNF-209ENST00000420794 ADARP55265 1226 aaKnown RBP7.29□□□□□ -1.24
BDNF-209ENST00000420794 ART3Q13508 389 aa7.29□□□□□ -1.24
BDNF-209ENST00000420794 SEMA3AQ14563 771 aa7.29□□□□□ -1.24
BDNF-209ENST00000420794 INPP5AQ14642 412 aa7.29□□□□□ -1.24
BDNF-209ENST00000420794 CCDC6Q16204 474 aa7.29□□□□□ -1.24
BDNF-209ENST00000420794 PAGE2BQ5JRK9 111 aa7.29□□□□□ -1.24
BDNF-209ENST00000420794 HABP4Q5JVS0 413 aaKnown RBP7.29□□□□□ -1.24
BDNF-209ENST00000420794 ADHFE1Q8IWW8 467 aa7.29□□□□□ -1.24
BDNF-209ENST00000420794 CLYBLQ8N0X4 340 aa7.29□□□□□ -1.24
BDNF-209ENST00000420794 PLD6Q8N2A8 252 aaKnown RBP7.29□□□□□ -1.24
BDNF-209ENST00000420794 LENG8Q96PV6 779 aaPredicted RBP7.29□□□□□ -1.24
BDNF-209ENST00000420794 BOCQ9BWV1 1114 aa7.29□□□□□ -1.24
BDNF-209ENST00000420794 KDM4CQ9H3R0 1056 aa7.29□□□□□ -1.24
BDNF-209ENST00000420794 CCDC134Q9H6E4 229 aa7.29□□□□□ -1.24
BDNF-209ENST00000420794 PARVBQ9HBI1 364 aa7.29□□□□□ -1.24
BDNF-209ENST00000420794 SLC2A4RGQ9NR83 387 aa7.29□□□□□ -1.24
BDNF-209ENST00000420794 SPATA6Q9NWH7 488 aaPredicted RBP7.29□□□□□ -1.24
BDNF-209ENST00000420794 KLHL42Q9P2K6 505 aa7.29□□□□□ -1.24
BDNF-209ENST00000420794 WNT16Q9UBV4 365 aa7.29□□□□□ -1.24
BDNF-209ENST00000420794 KLQ9UEF7 1012 aa7.29□□□□□ -1.24
BDNF-209ENST00000420794 NPHS1O60500 1241 aa7.28□□□□□ -1.24
BDNF-209ENST00000420794 HNRNPCL1O60812 293 aaKnown RBP7.28□□□□□ -1.24
BDNF-209ENST00000420794 SHOX2O60902 331 aaPredicted RBP7.28□□□□□ -1.24
BDNF-209ENST00000420794 WDR47O94967 919 aa7.28□□□□□ -1.24
BDNF-209ENST00000420794 CTSLP07711 333 aa7.28□□□□□ -1.24
BDNF-209ENST00000420794 ACP5P13686 325 aa7.28□□□□□ -1.24
BDNF-209ENST00000420794 IL9P15248 144 aa7.28□□□□□ -1.24
BDNF-209ENST00000420794 GNSP15586 552 aa7.28□□□□□ -1.24
BDNF-209ENST00000420794 DRD4P21917 467 aa7.28□□□□□ -1.24
BDNF-209ENST00000420794 GNPDA1P46926 289 aa7.28□□□□□ -1.24
BDNF-209ENST00000420794 CDH13P55290 713 aa7.28□□□□□ -1.24
BDNF-209ENST00000420794 CYP2A13Q16696 494 aa7.28□□□□□ -1.24
BDNF-209ENST00000420794 CAPN13Q6MZZ7 669 aaPredicted RBP7.28□□□□□ -1.24
BDNF-209ENST00000420794 GPRIN3Q6ZVF9 776 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms