RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 KLHL6Q8WZ60 621 aa10.81□□□□□ -0.68
SSBP3-206ENST00000420121 CXorf40BQ96DE9 158 aa10.81□□□□□ -0.68
SSBP3-206ENST00000420121 HES6Q96HZ4 224 aa10.81□□□□□ -0.68
SSBP3-206ENST00000420121 LINC00615Q96LM1 132 aaPredicted RBP10.81□□□□□ -0.68
SSBP3-206ENST00000420121 TTC25Q96NG3 672 aa10.81□□□□□ -0.68
SSBP3-206ENST00000420121 TGM7Q96PF1 710 aa10.81□□□□□ -0.68
SSBP3-206ENST00000420121 INSM2Q96T92 566 aaPredicted RBP10.81□□□□□ -0.68
SSBP3-206ENST00000420121 C19orf43Q9BQ61 176 aa10.81□□□□□ -0.68
SSBP3-206ENST00000420121 TBL1YQ9BQ87 522 aa10.81□□□□□ -0.68
SSBP3-206ENST00000420121 ZCCHC2Q9C0B9 1178 aaKnown RBP10.81□□□□□ -0.68
SSBP3-206ENST00000420121 RAB33BQ9H082 229 aa10.81□□□□□ -0.68
SSBP3-206ENST00000420121 ZNF768Q9H5H4 540 aaKnown RBP10.81□□□□□ -0.68
SSBP3-206ENST00000420121 ASB8Q9H765 288 aa10.81□□□□□ -0.68
SSBP3-206ENST00000420121 SEMA5BQ9P283 1151 aa10.81□□□□□ -0.68
SSBP3-206ENST00000420121 PSMD13Q9UNM6 376 aa10.81□□□□□ -0.68
SSBP3-206ENST00000420121 SPTA1P02549 2419 aa10.81□□□□□ -0.68
SSBP3-206ENST00000420121 SPTBP11277 2137 aa10.81□□□□□ -0.68
SSBP3-206ENST00000420121 MYO18BQ8IUG5 2567 aa10.8□□□□□ -0.68
SSBP3-206ENST00000420121 IGLV3-16A0A075B6K0 115 aa10.8□□□□□ -0.68
SSBP3-206ENST00000420121 TRBV5-4A0A0C4DH59 114 aa10.8□□□□□ -0.68
SSBP3-206ENST00000420121 MGAT4DA6NG13 374 aa10.8□□□□□ -0.68
SSBP3-206ENST00000420121 C2orf81A6NN90 581 aa10.8□□□□□ -0.68
SSBP3-206ENST00000420121 MIF4GDA9UHW6 222 aaKnown RBP10.8□□□□□ -0.68
SSBP3-206ENST00000420121 CCL22O00626 93 aa10.8□□□□□ -0.68
SSBP3-206ENST00000420121 SNRNP200O75643 2136 aaKnown RBP10.8□□□□□ -0.68
SSBP3-206ENST00000420121 STK17BO94768 372 aa10.8□□□□□ -0.68
SSBP3-206ENST00000420121 AMD1P17707 334 aa10.8□□□□□ -0.68
SSBP3-206ENST00000420121 VCLP18206 1134 aa10.8□□□□□ -0.68
SSBP3-206ENST00000420121 MSH3P20585 1137 aa10.8□□□□□ -0.68
SSBP3-206ENST00000420121 PBLDP30039 288 aaPredicted RBP10.8□□□□□ -0.68
SSBP3-206ENST00000420121 CDKN1CP49918 316 aaPredicted RBP10.8□□□□□ -0.68
SSBP3-206ENST00000420121 ATP1A2P50993 1020 aa10.8□□□□□ -0.68
SSBP3-206ENST00000420121 PRPSAP1Q14558 356 aa10.8□□□□□ -0.68
SSBP3-206ENST00000420121 DUS1LQ6P1R4 473 aaKnown RBP10.8□□□□□ -0.68
SSBP3-206ENST00000420121 ZNF605Q86T29 641 aa10.8□□□□□ -0.68
SSBP3-206ENST00000420121 NLGN4XQ8N0W4 816 aa10.8□□□□□ -0.68
SSBP3-206ENST00000420121 NXPE1Q8N323 547 aa10.8□□□□□ -0.68
SSBP3-206ENST00000420121 IL22RA1Q8N6P7 574 aa10.8□□□□□ -0.68
SSBP3-206ENST00000420121 FAM71DQ8N9W8 422 aa10.8□□□□□ -0.68
SSBP3-206ENST00000420121 NLGN4YQ8NFZ3 816 aaPredicted RBP10.8□□□□□ -0.68
SSBP3-206ENST00000420121 OR2L2Q8NH16 312 aa10.8□□□□□ -0.68
SSBP3-206ENST00000420121 RNF31Q96EP0 1072 aa10.8□□□□□ -0.68
SSBP3-206ENST00000420121 RMDN2Q96LZ7 410 aa10.8□□□□□ -0.68
SSBP3-206ENST00000420121 ZPBPQ9BS86 351 aa10.8□□□□□ -0.68
SSBP3-206ENST00000420121 WWP1Q9H0M0 922 aa10.8□□□□□ -0.68
SSBP3-206ENST00000420121 FAM96AQ9H5X1 160 aa10.8□□□□□ -0.68
SSBP3-206ENST00000420121 ASH1LQ9NR48 2969 aaKnown RBP10.8□□□□□ -0.68
SSBP3-206ENST00000420121 IMPACTQ9P2X3 320 aa10.8□□□□□ -0.68
SSBP3-206ENST00000420121 CFAP20Q9Y6A4 193 aaKnown RBP10.8□□□□□ -0.68
SSBP3-206ENST00000420121 IGHV5-51A0A0C4DH38 117 aa10.79□□□□□ -0.68
SSBP3-206ENST00000420121 GOLGA6L3A6NEY3 463 aa10.79□□□□□ -0.68
SSBP3-206ENST00000420121 B8ZZF3 427 aa10.79□□□□□ -0.68
SSBP3-206ENST00000420121 H7C0S8 307 aa10.79□□□□□ -0.68
SSBP3-206ENST00000420121 TERTO14746 1132 aaKnown RBP10.79□□□□□ -0.68
SSBP3-206ENST00000420121 POLR1CO15160 346 aaPredicted RBP10.79□□□□□ -0.68
SSBP3-206ENST00000420121 STK10O94804 968 aaKnown RBP10.79□□□□□ -0.68
SSBP3-206ENST00000420121 CRTAMO95727 393 aa10.79□□□□□ -0.68
SSBP3-206ENST00000420121 FAM87AP0C7U9 286 aa10.79□□□□□ -0.68
SSBP3-206ENST00000420121 PRSS56P0CW18 603 aa10.79□□□□□ -0.68
SSBP3-206ENST00000420121 MTHFD1P11586 935 aaKnown RBP10.79□□□□□ -0.68
SSBP3-206ENST00000420121 F8A1P23610 371 aa10.79□□□□□ -0.68
SSBP3-206ENST00000420121 PSMA3P25788 255 aa10.79□□□□□ -0.68
SSBP3-206ENST00000420121 AKT1P31749 480 aa10.79□□□□□ -0.68
SSBP3-206ENST00000420121 CETN2P41208 172 aa10.79□□□□□ -0.68
SSBP3-206ENST00000420121 HALP42357 657 aa10.79□□□□□ -0.68
SSBP3-206ENST00000420121 PRLHRP49683 370 aa10.79□□□□□ -0.68
SSBP3-206ENST00000420121 SEPHS1P49903 392 aa10.79□□□□□ -0.68
SSBP3-206ENST00000420121 TMPRSS15P98073 1019 aa10.79□□□□□ -0.68
SSBP3-206ENST00000420121 KIF5AQ12840 1032 aa10.79□□□□□ -0.68
SSBP3-206ENST00000420121 LONRF2Q1L5Z9 754 aa10.79□□□□□ -0.68
SSBP3-206ENST00000420121 PARP6Q2NL67 630 aa10.79□□□□□ -0.68
SSBP3-206ENST00000420121 CAPRIN2Q6IMN6 1127 aaKnown RBP10.79□□□□□ -0.68
SSBP3-206ENST00000420121 FAM92BQ6ZTR7 304 aa10.79□□□□□ -0.68
SSBP3-206ENST00000420121 SNX20Q7Z614 316 aa10.79□□□□□ -0.68
SSBP3-206ENST00000420121 UNC5BQ8IZJ1 945 aa10.79□□□□□ -0.68
SSBP3-206ENST00000420121 SYCE1Q8N0S2 351 aa10.79□□□□□ -0.68
SSBP3-206ENST00000420121 TTC13Q8NBP0 860 aa10.79□□□□□ -0.68
SSBP3-206ENST00000420121 SPC24Q8NBT2 197 aa10.79□□□□□ -0.68
SSBP3-206ENST00000420121 ATG4AQ8WYN0 398 aa10.79□□□□□ -0.68
SSBP3-206ENST00000420121 SLC45A3Q96JT2 553 aa10.79□□□□□ -0.68
SSBP3-206ENST00000420121 SLC41A2Q96JW4 573 aa10.79□□□□□ -0.68
SSBP3-206ENST00000420121 ZNF514Q96K75 400 aaPredicted RBP10.79□□□□□ -0.68
SSBP3-206ENST00000420121 DNAJC1Q96KC8 554 aaKnown RBP10.79□□□□□ -0.68
SSBP3-206ENST00000420121 FERMT1Q9BQL6 677 aa10.79□□□□□ -0.68
SSBP3-206ENST00000420121 TMEM121Q9BTD3 319 aa10.79□□□□□ -0.68
SSBP3-206ENST00000420121 STARD5Q9NSY2 213 aa10.79□□□□□ -0.68
SSBP3-206ENST00000420121 IL17BQ9UHF5 180 aa10.79□□□□□ -0.68
SSBP3-206ENST00000420121 FEZ2Q9UHY8 353 aaPredicted RBP10.79□□□□□ -0.68
SSBP3-206ENST00000420121 UBR5O95071 2799 aaPredicted RBP10.79□□□□□ -0.68
SSBP3-206ENST00000420121 FER1L5A0AVI2 2057 aa10.78□□□□□ -0.68
SSBP3-206ENST00000420121 NKX2-8O15522 239 aa10.78□□□□□ -0.68
SSBP3-206ENST00000420121 TIAF1O95411 115 aa10.78□□□□□ -0.68
SSBP3-206ENST00000420121 AP2A1O95782 977 aa10.78□□□□□ -0.68
SSBP3-206ENST00000420121 FGF5P12034 268 aa10.78□□□□□ -0.68
SSBP3-206ENST00000420121 TPH1P17752 444 aa10.78□□□□□ -0.68
SSBP3-206ENST00000420121 NELFEP18615 380 aaKnown RBP10.78□□□□□ -0.68
SSBP3-206ENST00000420121 MAP4P27816 1152 aaKnown RBP10.78□□□□□ -0.68
SSBP3-206ENST00000420121 MC4RP32245 332 aa10.78□□□□□ -0.68
SSBP3-206ENST00000420121 STAT5AP42229 794 aa10.78□□□□□ -0.68
SSBP3-206ENST00000420121 PDE1BQ01064 536 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms