RNA–Protein interactions for RNA: ENST00000417814.3

TNFRSF8-203, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF8, Length 3,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-203ENST00000417814 C6orf136Q5SQH8 315 aa13.03□□□□□ -0.32
TNFRSF8-203ENST00000417814 KDELC1Q6UW63 502 aa13.03□□□□□ -0.32
TNFRSF8-203ENST00000417814 ADGRG5Q8IZF4 528 aa13.03□□□□□ -0.32
TNFRSF8-203ENST00000417814 DTWD1Q8N5C7 304 aa13.03□□□□□ -0.32
TNFRSF8-203ENST00000417814 OR56A4Q8NGH8 313 aa13.03□□□□□ -0.32
TNFRSF8-203ENST00000417814 TFAP2CQ92754 450 aa13.03□□□□□ -0.32
TNFRSF8-203ENST00000417814 IMP4Q96G21 291 aaKnown RBP13.03□□□□□ -0.32
TNFRSF8-203ENST00000417814 ZNF597Q96LX8 424 aa13.03□□□□□ -0.32
TNFRSF8-203ENST00000417814 SNX8Q9Y5X2 465 aa13.03□□□□□ -0.32
TNFRSF8-203ENST00000417814 H3BMQ9 156 aa13.02□□□□□ -0.32
TNFRSF8-203ENST00000417814 FGF10O15520 208 aaPredicted RBP13.02□□□□□ -0.32
TNFRSF8-203ENST00000417814 SLC25A14O95258 325 aaPredicted RBP13.02□□□□□ -0.32
TNFRSF8-203ENST00000417814 OPN1SWP03999 348 aa13.02□□□□□ -0.32
TNFRSF8-203ENST00000417814 TNFRSF1BP20333 461 aa13.02□□□□□ -0.32
TNFRSF8-203ENST00000417814 LEPRP48357 1165 aaKnown RBP13.02□□□□□ -0.32
TNFRSF8-203ENST00000417814 IDH2P48735 452 aaKnown RBP13.02□□□□□ -0.32
TNFRSF8-203ENST00000417814 ERVPABLB-1P60509 514 aa13.02□□□□□ -0.32
TNFRSF8-203ENST00000417814 TP53BP2Q13625 1128 aa13.02□□□□□ -0.32
TNFRSF8-203ENST00000417814 Q6ZPB1 254 aaPredicted RBP13.02□□□□□ -0.32
TNFRSF8-203ENST00000417814 BHLHA9Q7RTU4 235 aa13.02□□□□□ -0.32
TNFRSF8-203ENST00000417814 MON1AQ86VX9 555 aa13.02□□□□□ -0.32
TNFRSF8-203ENST00000417814 CLIP4Q8N3C7 705 aa13.02□□□□□ -0.32
TNFRSF8-203ENST00000417814 EGLN2Q96KS0 407 aa13.02□□□□□ -0.32
TNFRSF8-203ENST00000417814 APOLD1Q96LR9 279 aa13.02□□□□□ -0.32
TNFRSF8-203ENST00000417814 COG8Q96MW5 612 aa13.02□□□□□ -0.32
TNFRSF8-203ENST00000417814 DPH2Q9BQC3 489 aaPredicted RBP13.02□□□□□ -0.32
TNFRSF8-203ENST00000417814 CRISPLD1Q9H336 500 aa13.02□□□□□ -0.32
TNFRSF8-203ENST00000417814 PARVBQ9HBI1 364 aa13.02□□□□□ -0.32
TNFRSF8-203ENST00000417814 SYTL2Q9HCH5 934 aa13.02□□□□□ -0.32
TNFRSF8-203ENST00000417814 TLR8Q9NR97 1041 aaKnown RBP13.02□□□□□ -0.32
TNFRSF8-203ENST00000417814 AGO1Q9UL18 857 aaKnown RBP13.02□□□□□ -0.32
TNFRSF8-203ENST00000417814 TRIM24O15164 1050 aa13.02□□□□□ -0.32
TNFRSF8-203ENST00000417814 DBTP11182 482 aaKnown RBP13.02□□□□□ -0.32
TNFRSF8-203ENST00000417814 MTHFD2P13995 350 aa13.02□□□□□ -0.32
TNFRSF8-203ENST00000417814 PKMP14618 531 aaKnown RBP13.02□□□□□ -0.32
TNFRSF8-203ENST00000417814 PAX3P23760 479 aa13.02□□□□□ -0.32
TNFRSF8-203ENST00000417814 BMXP51813 675 aa13.02□□□□□ -0.32
TNFRSF8-203ENST00000417814 FAM98BQ52LJ0 330 aaKnown RBP13.02□□□□□ -0.32
TNFRSF8-203ENST00000417814 ERI1Q8IV48 349 aaKnown RBP13.02□□□□□ -0.32
TNFRSF8-203ENST00000417814 UBE2J2Q8N2K1 259 aa13.02□□□□□ -0.32
TNFRSF8-203ENST00000417814 LIX1Q8N485 282 aa13.02□□□□□ -0.32
TNFRSF8-203ENST00000417814 MDGA1Q8NFP4 955 aa13.02□□□□□ -0.32
TNFRSF8-203ENST00000417814 UTP15Q8TED0 518 aaKnown RBP13.02□□□□□ -0.32
TNFRSF8-203ENST00000417814 NRBF2Q96F24 287 aa13.02□□□□□ -0.32
TNFRSF8-203ENST00000417814 CORO1BQ9BR76 489 aa13.02□□□□□ -0.32
TNFRSF8-203ENST00000417814 HERC2P3Q9BVR0 1158 aa13.02□□□□□ -0.32
TNFRSF8-203ENST00000417814 CLPBQ9H078 707 aa13.02□□□□□ -0.32
TNFRSF8-203ENST00000417814 KATNBL1Q9H079 304 aa13.02□□□□□ -0.32
TNFRSF8-203ENST00000417814 CCM2LQ9NUG4 571 aaPredicted RBP13.02□□□□□ -0.32
TNFRSF8-203ENST00000417814 VAPAQ9P0L0 249 aa13.02□□□□□ -0.32
TNFRSF8-203ENST00000417814 ABT1Q9ULW3 272 aaKnown RBP13.02□□□□□ -0.32
TNFRSF8-203ENST00000417814 PCDHB5Q9Y5E4 795 aa13.02□□□□□ -0.32
TNFRSF8-203ENST00000417814 ORC6Q9Y5N6 252 aa13.02□□□□□ -0.32
TNFRSF8-203ENST00000417814 OR1D2P34982 312 aa13.02□□□□□ -0.33
TNFRSF8-203ENST00000417814 HALP42357 657 aa13.02□□□□□ -0.33
TNFRSF8-203ENST00000417814 SGSHP51688 502 aa13.02□□□□□ -0.33
TNFRSF8-203ENST00000417814 ZCCHC8Q6NZY4 707 aaKnown RBP13.02□□□□□ -0.33
TNFRSF8-203ENST00000417814 LYSMD3Q7Z3D4 306 aa13.02□□□□□ -0.33
TNFRSF8-203ENST00000417814 HMGN2P46Q86SG4 172 aa13.02□□□□□ -0.33
TNFRSF8-203ENST00000417814 DCP1BQ8IZD4 617 aaKnown RBP13.02□□□□□ -0.33
TNFRSF8-203ENST00000417814 HPS1Q92902 700 aa13.02□□□□□ -0.33
TNFRSF8-203ENST00000417814 FOXJ1Q92949 421 aa13.02□□□□□ -0.33
TNFRSF8-203ENST00000417814 RIC8BQ9NVN3 520 aa13.02□□□□□ -0.33
TNFRSF8-203ENST00000417814 VPS51Q9UID3 782 aa13.02□□□□□ -0.33
TNFRSF8-203ENST00000417814 GABRQQ9UN88 632 aa13.02□□□□□ -0.33
TNFRSF8-203ENST00000417814 ZFC3H1O60293 1989 aaKnown RBP13.02□□□□□ -0.33
TNFRSF8-203ENST00000417814 CFAP99D6REC4 459 aa13.01□□□□□ -0.33
TNFRSF8-203ENST00000417814 INSIG1O15503 277 aa13.01□□□□□ -0.33
TNFRSF8-203ENST00000417814 DEAF1O75398 565 aaPredicted RBP13.01□□□□□ -0.33
TNFRSF8-203ENST00000417814 IDO1P14902 403 aa13.01□□□□□ -0.33
TNFRSF8-203ENST00000417814 CAPGP40121 348 aa13.01□□□□□ -0.33
TNFRSF8-203ENST00000417814 FLT3LGP49771 235 aa13.01□□□□□ -0.33
TNFRSF8-203ENST00000417814 CCT8P50990 548 aa13.01□□□□□ -0.33
TNFRSF8-203ENST00000417814 CDC42EP1Q00587 391 aa13.01□□□□□ -0.33
TNFRSF8-203ENST00000417814 ZNF648Q5T619 568 aaPredicted RBP13.01□□□□□ -0.33
TNFRSF8-203ENST00000417814 CYP20A1Q6UW02 462 aa13.01□□□□□ -0.33
TNFRSF8-203ENST00000417814 PELI3Q8N2H9 469 aa13.01□□□□□ -0.33
TNFRSF8-203ENST00000417814 ZNF366Q8N895 744 aa13.01□□□□□ -0.33
TNFRSF8-203ENST00000417814 SEPT8Q92599 483 aa13.01□□□□□ -0.33
TNFRSF8-203ENST00000417814 PLEKHA8Q96JA3 519 aa13.01□□□□□ -0.33
TNFRSF8-203ENST00000417814 LHPPQ9H008 270 aa13.01□□□□□ -0.33
TNFRSF8-203ENST00000417814 PRDM16Q9HAZ2 1276 aa13.01□□□□□ -0.33
TNFRSF8-203ENST00000417814 PLGRKTQ9HBL7 147 aa13.01□□□□□ -0.33
TNFRSF8-203ENST00000417814 EXOSC4Q9NPD3 245 aaKnown RBP13.01□□□□□ -0.33
TNFRSF8-203ENST00000417814 LEF1Q9UJU2 399 aaPredicted RBP13.01□□□□□ -0.33
TNFRSF8-203ENST00000417814 COQ6Q9Y2Z9 468 aa13.01□□□□□ -0.33
TNFRSF8-203ENST00000417814 PCDHB3Q9Y5E6 796 aa13.01□□□□□ -0.33
TNFRSF8-203ENST00000417814 LOXHD1Q8IVV2 1947 aa13.01□□□□□ -0.33
TNFRSF8-203ENST00000417814 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.01□□□□□ -0.33
TNFRSF8-203ENST00000417814 FXYD1O00168 92 aa13.01□□□□□ -0.33
TNFRSF8-203ENST00000417814 SLC7A4O43246 635 aa13.01□□□□□ -0.33
TNFRSF8-203ENST00000417814 CYP7B1O75881 506 aa13.01□□□□□ -0.33
TNFRSF8-203ENST00000417814 NADKO95544 446 aaPredicted RBP13.01□□□□□ -0.33
TNFRSF8-203ENST00000417814 TACR2P21452 398 aa13.01□□□□□ -0.33
TNFRSF8-203ENST00000417814 ADRA1AP35348 466 aa13.01□□□□□ -0.33
TNFRSF8-203ENST00000417814 TRIP4Q15650 581 aaPredicted RBP13.01□□□□□ -0.33
TNFRSF8-203ENST00000417814 RNF19BQ6ZMZ0 732 aa13.01□□□□□ -0.33
TNFRSF8-203ENST00000417814 CCDC80Q76M96 950 aa13.01□□□□□ -0.33
TNFRSF8-203ENST00000417814 CARM1Q86X55 608 aa13.01□□□□□ -0.33
TNFRSF8-203ENST00000417814 SYTL1Q8IYJ3 562 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms