RNA–Protein interactions for RNA: ENST00000417101.1

ACTB-203, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 472 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-203ENST00000417101 SPA17Q15506 151 aa21.32■■□□□ 1
ACTB-203ENST00000417101 LARP7Q4G0J3 582 aaKnown RBP eCLIP21.32■■□□□ 1
ACTB-203ENST00000417101 METRNLQ641Q3 311 aa21.32■■□□□ 1
ACTB-203ENST00000417101 KLHL35Q6PF15 583 aa21.32■■□□□ 1
ACTB-203ENST00000417101 SIDT2Q8NBJ9 832 aaKnown RBP21.32■■□□□ 1
ACTB-203ENST00000417101 NAT14Q8WUY8 206 aa21.32■■□□□ 1
ACTB-203ENST00000417101 UBXN4Q92575 508 aa21.32■■□□□ 1
ACTB-203ENST00000417101 ABHD17AQ96GS6 310 aa21.32■■□□□ 1
ACTB-203ENST00000417101 SLC41A2Q96JW4 573 aa21.32■■□□□ 1
ACTB-203ENST00000417101 ZNF514Q96K75 400 aaPredicted RBP21.32■■□□□ 1
ACTB-203ENST00000417101 APOL2Q9BQE5 337 aa21.32■■□□□ 1
ACTB-203ENST00000417101 GORASP1Q9BQQ3 440 aa21.32■■□□□ 1
ACTB-203ENST00000417101 TRIM5Q9C035 493 aa21.32■■□□□ 1
ACTB-203ENST00000417101 SEMA5BQ9P283 1151 aa21.32■■□□□ 1
ACTB-203ENST00000417101 CFAP20Q9Y6A4 193 aaKnown RBP21.32■■□□□ 1
ACTB-203ENST00000417101 ZNF106Q9H2Y7 1883 aaKnown RBP21.32■■□□□ 1
ACTB-203ENST00000417101 MACROD2A1Z1Q3 448 aa21.31■■□□□ 1
ACTB-203ENST00000417101 GOLGA6L3A6NEY3 463 aa21.31■■□□□ 1
ACTB-203ENST00000417101 C2orf81A6NN90 581 aa21.31■■□□□ 1
ACTB-203ENST00000417101 TIAF1O95411 115 aa21.31■■□□□ 1
ACTB-203ENST00000417101 CCNYL3P0C7X3 344 aa21.31■■□□□ 1
ACTB-203ENST00000417101 MTHFD1P11586 935 aaKnown RBP21.31■■□□□ 1
ACTB-203ENST00000417101 LPOP22079 712 aaPredicted RBP21.31■■□□□ 1
ACTB-203ENST00000417101 TUBB3Q13509 450 aa21.31■■□□□ 1
ACTB-203ENST00000417101 OLIG2Q13516 323 aa21.31■■□□□ 1
ACTB-203ENST00000417101 SEPT6Q14141 434 aa21.31■■□□□ 1
ACTB-203ENST00000417101 ERV3-1Q14264 604 aa21.31■■□□□ 1
ACTB-203ENST00000417101 ITPRIPL1Q6GPH6 555 aa21.31■■□□□ 1
ACTB-203ENST00000417101 CYB5D1Q6P9G0 228 aa21.31■■□□□ 1
ACTB-203ENST00000417101 CCDC170Q8IYT3 715 aa21.31■■□□□ 1
ACTB-203ENST00000417101 OR4K2Q8NGD2 314 aa21.31■■□□□ 1
ACTB-203ENST00000417101 WWP1Q9H0M0 922 aa21.31■■□□□ 1
ACTB-203ENST00000417101 EPN3Q9H201 632 aa21.31■■□□□ 1
ACTB-203ENST00000417101 PDE7BQ9NP56 450 aa21.31■■□□□ 1
ACTB-203ENST00000417101 FAM8A1Q9UBU6 413 aa21.31■■□□□ 1
ACTB-203ENST00000417101 PADI1Q9ULC6 663 aa21.31■■□□□ 1
ACTB-203ENST00000417101 KCTD3Q9Y597 815 aa21.31■■□□□ 1
ACTB-203ENST00000417101 NBASA2RRP1 2371 aa21.3■■□□□ 1
ACTB-203ENST00000417101 FOLR1P15328 257 aa21.3■■□□□ 1
ACTB-203ENST00000417101 OTUD4Q01804 1114 aaKnown RBP21.3■■□□□ 1
ACTB-203ENST00000417101 TAF1AQ15573 450 aaPredicted RBP21.3■■□□□ 1
ACTB-203ENST00000417101 DUS1LQ6P1R4 473 aaKnown RBP21.3■■□□□ 1
ACTB-203ENST00000417101 SARM1Q6SZW1 724 aa21.3■■□□□ 1
ACTB-203ENST00000417101 RANBP10Q6VN20 620 aa21.3■■□□□ 1
ACTB-203ENST00000417101 ACTL9Q8TC94 416 aa21.3■■□□□ 1
ACTB-203ENST00000417101 C12orf66Q96MD2 445 aa21.3■■□□□ 1
ACTB-203ENST00000417101 INSM2Q96T92 566 aaPredicted RBP21.3■■□□□ 1
ACTB-203ENST00000417101 MAP3K3Q99759 626 aa21.3■■□□□ 1
ACTB-203ENST00000417101 FERMT1Q9BQL6 677 aa21.3■■□□□ 1
ACTB-203ENST00000417101 ASB8Q9H765 288 aa21.3■■□□□ 1
ACTB-203ENST00000417101 LUC7LQ9NQ29 371 aaKnown RBP21.3■■□□□ 1
ACTB-203ENST00000417101 FKBPLQ9UIM3 349 aa21.3■■□□□ 1
ACTB-203ENST00000417101 ANAPC2Q9UJX6 822 aa21.3■■□□□ 1
ACTB-203ENST00000417101 KCND3Q9UK17 655 aa21.3■■□□□ 1
ACTB-203ENST00000417101 RARRES3Q9UL19 164 aa21.3■■□□□ 1
ACTB-203ENST00000417101 KCNMB2Q9Y691 235 aa21.3■■□□□ 1
ACTB-203ENST00000417101 MAST4O15021 2626 aa21.29■■□□□ 1
ACTB-203ENST00000417101 MGAT4DA6NG13 374 aa21.29■■□□□ 1
ACTB-203ENST00000417101 SRP72O76094 671 aaKnown RBP21.29■■□□□ 1
ACTB-203ENST00000417101 FURINP09958 794 aa21.29■■□□□ 1
ACTB-203ENST00000417101 PSMB4P28070 264 aa21.29■■□□□ 1
ACTB-203ENST00000417101 CTNNA1P35221 906 aaKnown RBP21.29■■□□□ 1
ACTB-203ENST00000417101 ADRA1AP35348 466 aa21.29■■□□□ 1
ACTB-203ENST00000417101 CYLC1P35663 651 aaPredicted RBP21.29■■□□□ 1
ACTB-203ENST00000417101 ARL4DP49703 201 aa21.29■■□□□ 1
ACTB-203ENST00000417101 COPS2P61201 443 aa21.29■■□□□ 1
ACTB-203ENST00000417101 DNTTIP2Q5QJE6 756 aaKnown RBP21.29■■□□□ 1
ACTB-203ENST00000417101 PWWP2BQ6NUJ5 590 aa21.29■■□□□ 1
ACTB-203ENST00000417101 CERS6Q6ZMG9 384 aa21.29■■□□□ 1
ACTB-203ENST00000417101 SPDYE1Q8NFV5 336 aaPredicted RBP21.29■■□□□ 1
ACTB-203ENST00000417101 OR2L2Q8NH16 312 aa21.29■■□□□ 1
ACTB-203ENST00000417101 FAM118BQ9BPY3 351 aa21.29■■□□□ 1
ACTB-203ENST00000417101 HRASLS2Q9NWW9 162 aa21.29■■□□□ 1
ACTB-203ENST00000417101 ACSL5Q9ULC5 683 aa21.29■■□□□ 1
ACTB-203ENST00000417101 PCDHA3Q9Y5H8 950 aa21.29■■□□□ 1
ACTB-203ENST00000417101 PTPN13Q12923 2485 aa21.29■■□□□ 1
ACTB-203ENST00000417101 UBA6A0AVT1 1052 aaPredicted RBP21.28■■□□□ 1
ACTB-203ENST00000417101 OR5K3A6NET4 321 aa21.28■■□□□ 1
ACTB-203ENST00000417101 C5orf60A6NFR6 353 aa21.28■■□□□ 1
ACTB-203ENST00000417101 TLCD2A6NGC4 264 aa21.28■■□□□ 1
ACTB-203ENST00000417101 MT-ND3P03897 115 aa21.28■■□□□ 1
ACTB-203ENST00000417101 EBLN1P0CF75 366 aa21.28■■□□□ 1
ACTB-203ENST00000417101 CTNNA2P26232 953 aa21.28■■□□□ 1
ACTB-203ENST00000417101 CASRP41180 1078 aa21.28■■□□□ 1
ACTB-203ENST00000417101 EIF3EP60228 445 aaKnown RBP21.28■■□□□ 1
ACTB-203ENST00000417101 DNASE1L3Q13609 305 aa21.28■■□□□ 1
ACTB-203ENST00000417101 PRPSAP1Q14558 356 aa21.28■■□□□ 1
ACTB-203ENST00000417101 LACTB2Q53H82 288 aaPredicted RBP21.28■■□□□ 1
ACTB-203ENST00000417101 ANKRD20A2Q5SQ80 823 aa21.28■■□□□ 1
ACTB-203ENST00000417101 ANKRD20A1Q5TYW2 823 aa21.28■■□□□ 1
ACTB-203ENST00000417101 ANKRD20A3Q5VUR7 823 aa21.28■■□□□ 1
ACTB-203ENST00000417101 CDKL3Q8IVW4 592 aaPredicted RBP21.28■■□□□ 1
ACTB-203ENST00000417101 CT55Q8WUE5 264 aa21.28■■□□□ 1
ACTB-203ENST00000417101 CD180Q99467 661 aa21.28■■□□□ 1
ACTB-203ENST00000417101 OSBPL8Q9BZF1 889 aa21.28■■□□□ 1
ACTB-203ENST00000417101 LHX9Q9NQ69 397 aa21.28■■□□□ 1
ACTB-203ENST00000417101 FGF21Q9NSA1 209 aa21.28■■□□□ 1
ACTB-203ENST00000417101 POLHQ9Y253 713 aa21.28■■□□□ 1
ACTB-203ENST00000417101 AAR2Q9Y312 384 aaKnown RBP21.28■■□□□ 1
ACTB-203ENST00000417101 PIPSLA2A3N6 862 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms