RNA–Protein interactions for RNA: ENST00000417043.5

RHBDF1-202, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 3

Gene RHBDF1, Length 816 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-202ENST00000417043 PCDHA13Q9Y5I0 950 aa15.26■□□□□ 0.03
RHBDF1-202ENST00000417043 KCNMB2Q9Y691 235 aa15.26■□□□□ 0.03
RHBDF1-202ENST00000417043 NAV2Q8IVL1 2488 aa15.26■□□□□ 0.03
RHBDF1-202ENST00000417043 STX7O15400 261 aaKnown RBP15.25■□□□□ 0.03
RHBDF1-202ENST00000417043 KCNJ13O60928 360 aa15.25■□□□□ 0.03
RHBDF1-202ENST00000417043 NTRK1P04629 796 aa15.25■□□□□ 0.03
RHBDF1-202ENST00000417043 EBLN1P0CF75 366 aa15.25■□□□□ 0.03
RHBDF1-202ENST00000417043 MSH3P20585 1137 aa15.25■□□□□ 0.03
RHBDF1-202ENST00000417043 ARCN1P48444 511 aaKnown RBP15.25■□□□□ 0.03
RHBDF1-202ENST00000417043 ITGA9Q13797 1035 aa15.25■□□□□ 0.03
RHBDF1-202ENST00000417043 PLCL1Q15111 1095 aa15.25■□□□□ 0.03
RHBDF1-202ENST00000417043 SKOR2Q2VWA4 1001 aaPredicted RBP15.25■□□□□ 0.03
RHBDF1-202ENST00000417043 ZDHHC20Q5W0Z9 365 aa15.25■□□□□ 0.03
RHBDF1-202ENST00000417043 METRNLQ641Q3 311 aa15.25■□□□□ 0.03
RHBDF1-202ENST00000417043 PWWP2BQ6NUJ5 590 aa15.25■□□□□ 0.03
RHBDF1-202ENST00000417043 FAM199XQ6PEV8 388 aaPredicted RBP15.25■□□□□ 0.03
RHBDF1-202ENST00000417043 FBXO38Q6PIJ6 1188 aa15.25■□□□□ 0.03
RHBDF1-202ENST00000417043 SIDT2Q8NBJ9 832 aaKnown RBP15.25■□□□□ 0.03
RHBDF1-202ENST00000417043 OR4K2Q8NGD2 314 aa15.25■□□□□ 0.03
RHBDF1-202ENST00000417043 FSD1LQ9BXM9 530 aa15.25■□□□□ 0.03
RHBDF1-202ENST00000417043 RAB33BQ9H082 229 aa15.25■□□□□ 0.03
RHBDF1-202ENST00000417043 WWP1Q9H0M0 922 aa15.25■□□□□ 0.03
RHBDF1-202ENST00000417043 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.25■□□□□ 0.03
RHBDF1-202ENST00000417043 FKBPLQ9UIM3 349 aa15.25■□□□□ 0.03
RHBDF1-202ENST00000417043 TRHDEQ9UKU6 1024 aa15.25■□□□□ 0.03
RHBDF1-202ENST00000417043 PADI1Q9ULC6 663 aa15.25■□□□□ 0.03
RHBDF1-202ENST00000417043 PCDHB3Q9Y5E6 796 aa15.25■□□□□ 0.03
RHBDF1-202ENST00000417043 DNMT3AQ9Y6K1 912 aaPredicted RBP15.25■□□□□ 0.03
RHBDF1-202ENST00000417043 MAST4O15021 2626 aa15.25■□□□□ 0.03
RHBDF1-202ENST00000417043 TNRC6AQ8NDV7 1962 aaKnown RBP15.24■□□□□ 0.03
RHBDF1-202ENST00000417043 CDC14CA4D256 554 aa15.24■□□□□ 0.03
RHBDF1-202ENST00000417043 HACD1B0YJ81 288 aa15.24■□□□□ 0.03
RHBDF1-202ENST00000417043 DDX3YO15523 660 aaKnown RBP15.24■□□□□ 0.03
RHBDF1-202ENST00000417043 PRAMEF1O95521 474 aa15.24■□□□□ 0.03
RHBDF1-202ENST00000417043 POLBP06746 335 aa15.24■□□□□ 0.03
RHBDF1-202ENST00000417043 CCNYL3P0C7X3 344 aa15.24■□□□□ 0.03
RHBDF1-202ENST00000417043 MTHFD1P11586 935 aaKnown RBP15.24■□□□□ 0.03
RHBDF1-202ENST00000417043 PTMSP20962 102 aa15.24■□□□□ 0.03
RHBDF1-202ENST00000417043 AKT1P31749 480 aa15.24■□□□□ 0.03
RHBDF1-202ENST00000417043 CASRP41180 1078 aa15.24■□□□□ 0.03
RHBDF1-202ENST00000417043 TMPRSS15P98073 1019 aa15.24■□□□□ 0.03
RHBDF1-202ENST00000417043 XRCC4Q13426 336 aa15.24■□□□□ 0.03
RHBDF1-202ENST00000417043 TUBB3Q13509 450 aa15.24■□□□□ 0.03
RHBDF1-202ENST00000417043 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.24■□□□□ 0.03
RHBDF1-202ENST00000417043 CRTC2Q53ET0 693 aaPredicted RBP15.24■□□□□ 0.03
RHBDF1-202ENST00000417043 BBS12Q6ZW61 710 aa15.24■□□□□ 0.03
RHBDF1-202ENST00000417043 LILRA3Q8N6C8 439 aaPredicted RBP15.24■□□□□ 0.03
RHBDF1-202ENST00000417043 CT55Q8WUE5 264 aa15.24■□□□□ 0.03
RHBDF1-202ENST00000417043 SLC41A2Q96JW4 573 aa15.24■□□□□ 0.03
RHBDF1-202ENST00000417043 C12orf66Q96MD2 445 aa15.24■□□□□ 0.03
RHBDF1-202ENST00000417043 PPM1MQ96MI6 270 aa15.24■□□□□ 0.03
RHBDF1-202ENST00000417043 ZCCHC2Q9C0B9 1178 aaKnown RBP15.24■□□□□ 0.03
RHBDF1-202ENST00000417043 GBA3Q9H227 469 aa15.24■□□□□ 0.03
RHBDF1-202ENST00000417043 ASB8Q9H765 288 aa15.24■□□□□ 0.03
RHBDF1-202ENST00000417043 PDE7BQ9NP56 450 aa15.24■□□□□ 0.03
RHBDF1-202ENST00000417043 LHX9Q9NQ69 397 aa15.24■□□□□ 0.03
RHBDF1-202ENST00000417043 HRASLS2Q9NWW9 162 aa15.24■□□□□ 0.03
RHBDF1-202ENST00000417043 SEMA5BQ9P283 1151 aa15.24■□□□□ 0.03
RHBDF1-202ENST00000417043 RARRES3Q9UL19 164 aa15.24■□□□□ 0.03
RHBDF1-202ENST00000417043 TP53TG5Q9Y2B4 290 aa15.24■□□□□ 0.03
RHBDF1-202ENST00000417043 MED13Q9UHV7 2174 aa15.24■□□□□ 0.03
RHBDF1-202ENST00000417043 PIPSLA2A3N6 862 aa15.23■□□□□ 0.03
RHBDF1-202ENST00000417043 RCCD1A6NED2 376 aa15.23■□□□□ 0.03
RHBDF1-202ENST00000417043 GOLGA6L3A6NEY3 463 aa15.23■□□□□ 0.03
RHBDF1-202ENST00000417043 MGAT4DA6NG13 374 aa15.23■□□□□ 0.03
RHBDF1-202ENST00000417043 APOC4-APOC2K7ER74 178 aa15.23■□□□□ 0.03
RHBDF1-202ENST00000417043 SGTAO43765 313 aa15.23■□□□□ 0.03
RHBDF1-202ENST00000417043 CREG1O75629 220 aa15.23■□□□□ 0.03
RHBDF1-202ENST00000417043 LCA5LO95447 670 aa15.23■□□□□ 0.03
RHBDF1-202ENST00000417043 APOC2P02655 101 aa15.23■□□□□ 0.03
RHBDF1-202ENST00000417043 LPOP22079 712 aaPredicted RBP15.23■□□□□ 0.03
RHBDF1-202ENST00000417043 PSMB4P28070 264 aa15.23■□□□□ 0.03
RHBDF1-202ENST00000417043 ADRA1AP35348 466 aa15.23■□□□□ 0.03
RHBDF1-202ENST00000417043 GEMP55040 296 aa15.23■□□□□ 0.03
RHBDF1-202ENST00000417043 DNASE1L3Q13609 305 aa15.23■□□□□ 0.03
RHBDF1-202ENST00000417043 LONRF2Q1L5Z9 754 aa15.23■□□□□ 0.03
RHBDF1-202ENST00000417043 LACTB2Q53H82 288 aaPredicted RBP15.23■□□□□ 0.03
RHBDF1-202ENST00000417043 CCDC181Q5TID7 509 aa15.23■□□□□ 0.03
RHBDF1-202ENST00000417043 AADACL2Q6P093 401 aa15.23■□□□□ 0.03
RHBDF1-202ENST00000417043 RANBP10Q6VN20 620 aa15.23■□□□□ 0.03
RHBDF1-202ENST00000417043 DAAM2Q86T65 1068 aa15.23■□□□□ 0.03
RHBDF1-202ENST00000417043 OR13C4Q8NGS5 318 aa15.23■□□□□ 0.03
RHBDF1-202ENST00000417043 ACTL9Q8TC94 416 aa15.23■□□□□ 0.03
RHBDF1-202ENST00000417043 UBXN4Q92575 508 aa15.23■□□□□ 0.03
RHBDF1-202ENST00000417043 RBM41Q96IZ5 413 aaKnown RBP15.23■□□□□ 0.03
RHBDF1-202ENST00000417043 NRTNQ99748 197 aa15.23■□□□□ 0.03
RHBDF1-202ENST00000417043 TWSG1Q9GZX9 223 aa15.23■□□□□ 0.03
RHBDF1-202ENST00000417043 FAM96AQ9H5X1 160 aa15.23■□□□□ 0.03
RHBDF1-202ENST00000417043 SMOXQ9NWM0 555 aa15.23■□□□□ 0.03
RHBDF1-202ENST00000417043 ANAPC2Q9UJX6 822 aa15.23■□□□□ 0.03
RHBDF1-202ENST00000417043 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.23■□□□□ 0.03
RHBDF1-202ENST00000417043 UBA6A0AVT1 1052 aaPredicted RBP15.22■□□□□ 0.03
RHBDF1-202ENST00000417043 MACROD2A1Z1Q3 448 aa15.22■□□□□ 0.03
RHBDF1-202ENST00000417043 OR6C74A6NCV1 312 aa15.22■□□□□ 0.03
RHBDF1-202ENST00000417043 OR5K3A6NET4 321 aa15.22■□□□□ 0.03
RHBDF1-202ENST00000417043 CCL22O00626 93 aa15.22■□□□□ 0.03
RHBDF1-202ENST00000417043 DNAJB5O75953 348 aa15.22■□□□□ 0.03
RHBDF1-202ENST00000417043 SRP72O76094 671 aaKnown RBP15.22■□□□□ 0.03
RHBDF1-202ENST00000417043 RPS18P62269 152 aaKnown RBP15.22■□□□□ 0.03
RHBDF1-202ENST00000417043 FOXK1P85037 733 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms