RNA–Protein interactions for RNA: ENST00000416688.5

CTDSPL-203, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-203ENST00000416688 C11orf44Q8N8P7 122 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 L3MBTL4Q8NA19 623 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 FAM47BQ8NA70 645 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 CLEC1AQ8NC01 280 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 SMG8Q8ND04 991 aaKnown RBP3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 FAM46DQ8NEK8 389 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 OR9K2Q8NGE7 335 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 OR8J1Q8NGP2 316 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 FAM81AQ8TBF8 368 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 ENKURQ8TC29 256 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 LRRC20Q8TCA0 184 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 RNASE8Q8TDE3 154 aaKnown RBP3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 FBLIM1Q8WUP2 373 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 SCFD1Q8WVM8 642 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 LIPHQ8WWY8 451 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 ATL1Q8WXF7 558 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 CLEC4DQ8WXI8 215 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 FCGR1BQ92637 280 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 DVL3Q92997 716 aaPredicted RBP3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 RRNAD1Q96FB5 475 aaKnown RBP3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 CDKN2AIPNLQ96HQ2 116 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 MAGED4Q96JG8 741 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 ELMO2Q96JJ3 720 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 RPL10LQ96L21 214 aaKnown RBP3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 PRRC1Q96M27 445 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 Q96M66 194 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 LRFN5Q96NI6 719 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 BTBD9Q96Q07 612 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 NPAS1Q99742 590 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 SLC29A1Q99808 456 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 SELENOSQ9BQE4 189 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 CLSTN3Q9BQT9 956 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 TMEM79Q9BSE2 394 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 TDRD1Q9BXT4 1180 aaKnown RBP3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 GON7Q9BXV9 100 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 GPR87Q9BY21 358 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 FRMD8P1Q9BZ68 369 aaPredicted RBP3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 NMNAT2Q9BZQ4 307 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 TSGA10Q9BZW7 698 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 HAPLN2Q9GZV7 340 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 SPATC1LQ9H0A9 340 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 RNF208Q9H0X6 261 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 RHBGQ9H310 441 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 TMEM231Q9H6L2 316 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 AUNIPQ9H7T9 357 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 CARS2Q9HA77 564 aaKnown RBP3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 MEAF6Q9HAF1 191 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 KIF9Q9HAQ2 790 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 CYP3A43Q9HB55 503 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 RANGRFQ9HD47 186 aaPredicted RBP3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 JPH1Q9HDC5 661 aaPredicted RBP3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 KLHL1Q9NR64 748 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 ASNSD1Q9NWL6 643 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 FBXO34Q9NWN3 711 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 MRPL22Q9NWU5 206 aaKnown RBP3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 BABAM1Q9NWV8 329 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 NKIRAS1Q9NYS0 192 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 GTSE1Q9NYZ3 720 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 SMARCAL1Q9NZC9 954 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 LARSQ9P2J5 1176 aaKnown RBP3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 ERVK-18Q9QC07 812 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 RHCGQ9UBD6 479 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 WNT16Q9UBV4 365 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 HSPB7Q9UBY9 170 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 TRPS1Q9UHF7 1281 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 RAPGEFL1Q9UHV5 662 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 TRPC5Q9UL62 973 aaPredicted RBP3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 STAP1Q9ULZ2 295 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 SLC12A4Q9UP95 1085 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 SATB2Q9UPW6 733 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 ERVK-19Q9WJR5 959 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 MAST3O60307 1309 aa3.09□□□□□ -1.91
CTDSPL-203ENST00000416688 CARMIL2Q6F5E8 1435 aa3.09□□□□□ -1.92
CTDSPL-203ENST00000416688 CYP3A7-CYP3A51PA0A087WV96 503 aa3.08□□□□□ -1.92
CTDSPL-203ENST00000416688 A0A0A6YYK5 440 aaPredicted RBP3.08□□□□□ -1.92
CTDSPL-203ENST00000416688 A0A1W2PQ27 194 aa3.08□□□□□ -1.92
CTDSPL-203ENST00000416688 A0A1W2PQ64 194 aa3.08□□□□□ -1.92
CTDSPL-203ENST00000416688 A0A1W2PQC6 194 aa3.08□□□□□ -1.92
CTDSPL-203ENST00000416688 A0A1W2PQD8 194 aa3.08□□□□□ -1.92
CTDSPL-203ENST00000416688 MACROD2A1Z1Q3 448 aa3.08□□□□□ -1.92
CTDSPL-203ENST00000416688 SLC35F4A4IF30 521 aa3.08□□□□□ -1.92
CTDSPL-203ENST00000416688 GOLGA8IPA6NC78 632 aa3.08□□□□□ -1.92
CTDSPL-203ENST00000416688 GOLGA6L4A6NEF3 574 aa3.08□□□□□ -1.92
CTDSPL-203ENST00000416688 C3orf70A6NLC5 250 aaPredicted RBP3.08□□□□□ -1.92
CTDSPL-203ENST00000416688 C12orf71A8MTZ7 269 aa3.08□□□□□ -1.92
CTDSPL-203ENST00000416688 C1QTNF9BB2RNN3 333 aa3.08□□□□□ -1.92
CTDSPL-203ENST00000416688 SHISA8B8ZZ34 492 aa3.08□□□□□ -1.92
CTDSPL-203ENST00000416688 NDUFAB1O14561 156 aa3.08□□□□□ -1.92
CTDSPL-203ENST00000416688 ZNF197O14709 1029 aa3.08□□□□□ -1.92
CTDSPL-203ENST00000416688 MAP2K7O14733 419 aa3.08□□□□□ -1.92
CTDSPL-203ENST00000416688 KIAA0391O15091 583 aaKnown RBP3.08□□□□□ -1.92
CTDSPL-203ENST00000416688 NKX2-8O15522 239 aa3.08□□□□□ -1.92
CTDSPL-203ENST00000416688 PJA2O43164 708 aa3.08□□□□□ -1.92
CTDSPL-203ENST00000416688 CTIFO43310 598 aaKnown RBP3.08□□□□□ -1.92
CTDSPL-203ENST00000416688 KCNAB3O43448 404 aa3.08□□□□□ -1.92
CTDSPL-203ENST00000416688 AKR7A2O43488 359 aa3.08□□□□□ -1.92
CTDSPL-203ENST00000416688 AKAP8O43823 692 aaKnown RBP3.08□□□□□ -1.92
CTDSPL-203ENST00000416688 PEX1O43933 1283 aa3.08□□□□□ -1.92
CTDSPL-203ENST00000416688 ACSL4O60488 711 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms