RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 SEC14L5O43304 696 aa3.59□□□□□ -1.83
SF3B1-203ENST00000414174 PPIP5K2O43314 1243 aa3.59□□□□□ -1.83
SF3B1-203ENST00000414174 MGRN1O60291 552 aa3.59□□□□□ -1.83
SF3B1-203ENST00000414174 LPXNO60711 386 aa3.59□□□□□ -1.83
SF3B1-203ENST00000414174 PFKFB2O60825 505 aa3.59□□□□□ -1.83
SF3B1-203ENST00000414174 OPHN1O60890 802 aa3.59□□□□□ -1.83
SF3B1-203ENST00000414174 B4GALT2O60909 372 aa3.59□□□□□ -1.83
SF3B1-203ENST00000414174 GPR32O75388 356 aa3.59□□□□□ -1.83
SF3B1-203ENST00000414174 ZFPL1O95159 310 aa3.59□□□□□ -1.83
SF3B1-203ENST00000414174 KAT7O95251 611 aa3.59□□□□□ -1.83
SF3B1-203ENST00000414174 SNAI1O95863 264 aaPredicted RBP3.59□□□□□ -1.83
SF3B1-203ENST00000414174 DHFRP00374 187 aa3.59□□□□□ -1.83
SF3B1-203ENST00000414174 SERPINA3P01011 423 aa3.59□□□□□ -1.83
SF3B1-203ENST00000414174 CRYABP02511 175 aaKnown RBP3.59□□□□□ -1.83
SF3B1-203ENST00000414174 PRKCBP05771 671 aa3.59□□□□□ -1.83
SF3B1-203ENST00000414174 FABP1P07148 127 aa3.59□□□□□ -1.83
SF3B1-203ENST00000414174 SERPINA6P08185 405 aa3.59□□□□□ -1.83
SF3B1-203ENST00000414174 ANXA5P08758 320 aa3.59□□□□□ -1.83
SF3B1-203ENST00000414174 ABHD2P08910 425 aa3.59□□□□□ -1.83
SF3B1-203ENST00000414174 PLA2G4BP0C869 781 aa3.59□□□□□ -1.83
SF3B1-203ENST00000414174 COX5BP10606 129 aa3.59□□□□□ -1.83
SF3B1-203ENST00000414174 ITGAXP20702 1163 aa3.59□□□□□ -1.83
SF3B1-203ENST00000414174 PTNP21246 168 aa3.59□□□□□ -1.83
SF3B1-203ENST00000414174 SAT1P21673 171 aa3.59□□□□□ -1.83
SF3B1-203ENST00000414174 LCN1P31025 176 aa3.59□□□□□ -1.83
SF3B1-203ENST00000414174 HOXA7P31268 230 aaPredicted RBP3.59□□□□□ -1.83
SF3B1-203ENST00000414174 HOXA13P31271 388 aaPredicted RBP3.59□□□□□ -1.83
SF3B1-203ENST00000414174 SLC8A1P32418 973 aa3.59□□□□□ -1.83
SF3B1-203ENST00000414174 BSGP35613 385 aa3.59□□□□□ -1.83
SF3B1-203ENST00000414174 FASLGP48023 281 aa3.59□□□□□ -1.83
SF3B1-203ENST00000414174 CSNK1DP48730 415 aa3.59□□□□□ -1.83
SF3B1-203ENST00000414174 CEBPDP49716 269 aaPredicted RBP3.59□□□□□ -1.83
SF3B1-203ENST00000414174 SNU13P55769 128 aaKnown RBP3.59□□□□□ -1.83
SF3B1-203ENST00000414174 NME5P56597 212 aa3.59□□□□□ -1.83
SF3B1-203ENST00000414174 PRPS1P60891 318 aa3.59□□□□□ -1.83
SF3B1-203ENST00000414174 PHC1P78364 1004 aa3.59□□□□□ -1.83
SF3B1-203ENST00000414174 MRPS25P82663 173 aaKnown RBP3.59□□□□□ -1.83
SF3B1-203ENST00000414174 RHAGQ02094 409 aa3.59□□□□□ -1.83
SF3B1-203ENST00000414174 ZNF33AQ06730 810 aa3.59□□□□□ -1.83
SF3B1-203ENST00000414174 CYP24A1Q07973 514 aa3.59□□□□□ -1.83
SF3B1-203ENST00000414174 RESTQ13127 1097 aa3.59□□□□□ -1.83
SF3B1-203ENST00000414174 SNTB2Q13425 540 aaKnown RBP3.59□□□□□ -1.83
SF3B1-203ENST00000414174 DCTN2Q13561 401 aaKnown RBP3.59□□□□□ -1.83
SF3B1-203ENST00000414174 PIGHQ14442 188 aaPredicted RBP3.59□□□□□ -1.83
SF3B1-203ENST00000414174 CEBPEQ15744 281 aa3.59□□□□□ -1.83
SF3B1-203ENST00000414174 PAN2Q504Q3 1202 aaKnown RBP3.59□□□□□ -1.83
SF3B1-203ENST00000414174 ZC2HC1CQ53FD0 456 aaPredicted RBP3.59□□□□□ -1.83
SF3B1-203ENST00000414174 HIKESHIQ53FT3 197 aa3.59□□□□□ -1.83
SF3B1-203ENST00000414174 BRMS1LQ5PSV4 323 aa3.59□□□□□ -1.83
SF3B1-203ENST00000414174 DCST1Q5T197 706 aa3.59□□□□□ -1.83
SF3B1-203ENST00000414174 AGBL2Q5U5Z8 902 aa3.59□□□□□ -1.83
SF3B1-203ENST00000414174 LRRC38Q5VT99 294 aa3.59□□□□□ -1.83
SF3B1-203ENST00000414174 CST9LP1Q5W188 147 aa3.59□□□□□ -1.83
SF3B1-203ENST00000414174 JADE1Q6IE81 842 aa3.59□□□□□ -1.83
SF3B1-203ENST00000414174 C3orf33Q6P1S2 294 aa3.59□□□□□ -1.83
SF3B1-203ENST00000414174 CRIP3Q6Q6R5 217 aa3.59□□□□□ -1.83
SF3B1-203ENST00000414174 TSSK4Q6SA08 328 aa3.59□□□□□ -1.83
SF3B1-203ENST00000414174 CRELD2Q6UXH1 353 aaPredicted RBP3.59□□□□□ -1.83
SF3B1-203ENST00000414174 LIPIQ6XZB0 460 aa3.59□□□□□ -1.83
SF3B1-203ENST00000414174 ADAT2Q7Z6V5 191 aaKnown RBP3.59□□□□□ -1.83
SF3B1-203ENST00000414174 RTN4RL1Q86UN2 441 aaPredicted RBP3.59□□□□□ -1.83
SF3B1-203ENST00000414174 FAM228AQ86W67 206 aa3.59□□□□□ -1.83
SF3B1-203ENST00000414174 PLA2G4DQ86XP0 818 aa3.59□□□□□ -1.83
SF3B1-203ENST00000414174 NME9Q86XW9 330 aa3.59□□□□□ -1.83
SF3B1-203ENST00000414174 TICAM1Q8IUC6 712 aa3.59□□□□□ -1.83
SF3B1-203ENST00000414174 CNGA4Q8IV77 575 aa3.59□□□□□ -1.83
SF3B1-203ENST00000414174 DSELQ8IZU8 1212 aa3.59□□□□□ -1.83
SF3B1-203ENST00000414174 FRMD1Q8N878 549 aa3.59□□□□□ -1.83
SF3B1-203ENST00000414174 CEP112Q8N8E3 955 aa3.59□□□□□ -1.83
SF3B1-203ENST00000414174 NHLRC2Q8NBF2 726 aa3.59□□□□□ -1.83
SF3B1-203ENST00000414174 RNF169Q8NCN4 708 aa3.59□□□□□ -1.83
SF3B1-203ENST00000414174 C17orf47Q8NEP4 570 aa3.59□□□□□ -1.83
SF3B1-203ENST00000414174 OR8J1Q8NGP2 316 aa3.59□□□□□ -1.83
SF3B1-203ENST00000414174 OR2T3Q8NH03 318 aa3.59□□□□□ -1.83
SF3B1-203ENST00000414174 OR52N1Q8NH53 320 aa3.59□□□□□ -1.83
SF3B1-203ENST00000414174 NDNFQ8TB73 568 aa3.59□□□□□ -1.83
SF3B1-203ENST00000414174 MCOLN3Q8TDD5 553 aa3.59□□□□□ -1.83
SF3B1-203ENST00000414174 ELP5Q8TE02 316 aa3.59□□□□□ -1.83
SF3B1-203ENST00000414174 NSMCE1Q8WV22 266 aa3.59□□□□□ -1.83
SF3B1-203ENST00000414174 HTR3CQ8WXA8 447 aa3.59□□□□□ -1.83
SF3B1-203ENST00000414174 DVL3Q92997 716 aaPredicted RBP3.59□□□□□ -1.83
SF3B1-203ENST00000414174 ARHGEF26Q96DR7 871 aa3.59□□□□□ -1.83
SF3B1-203ENST00000414174 APOPT1Q96IL0 206 aa3.59□□□□□ -1.83
SF3B1-203ENST00000414174 ZFYVE19Q96K21 471 aa3.59□□□□□ -1.83
SF3B1-203ENST00000414174 ZNF514Q96K75 400 aaPredicted RBP3.59□□□□□ -1.83
SF3B1-203ENST00000414174 PPP1R36Q96LQ0 422 aa3.59□□□□□ -1.83
SF3B1-203ENST00000414174 NECTIN4Q96NY8 510 aa3.59□□□□□ -1.83
SF3B1-203ENST00000414174 QRFPRQ96P65 431 aa3.59□□□□□ -1.83
SF3B1-203ENST00000414174 OLFM3Q96PB7 478 aa3.59□□□□□ -1.83
SF3B1-203ENST00000414174 KLHL5Q96PQ7 755 aa3.59□□□□□ -1.83
SF3B1-203ENST00000414174 VPS35Q96QK1 796 aa3.59□□□□□ -1.83
SF3B1-203ENST00000414174 RANBP9Q96S59 729 aa3.59□□□□□ -1.83
SF3B1-203ENST00000414174 FIZ1Q96SL8 496 aa3.59□□□□□ -1.83
SF3B1-203ENST00000414174 SYT3Q9BQG1 590 aa3.59□□□□□ -1.83
SF3B1-203ENST00000414174 C11orf70Q9BRQ4 267 aa3.59□□□□□ -1.83
SF3B1-203ENST00000414174 TMEM175Q9BSA9 504 aa3.59□□□□□ -1.83
SF3B1-203ENST00000414174 ZNF577Q9BSK1 485 aa3.59□□□□□ -1.83
SF3B1-203ENST00000414174 UBAC1Q9BSL1 405 aa3.59□□□□□ -1.83
SF3B1-203ENST00000414174 RTN4RQ9BZR6 473 aa3.59□□□□□ -1.83
SF3B1-203ENST00000414174 SLC22A4Q9H015 551 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms