RNA–Protein interactions for RNA: ENST00000413852.5

SEMA3F-202, Transcript of semaphorin 3F, humanhuman

TSL 1 (best) BASIC

Gene SEMA3F, Length 3,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-202ENST00000413852 PDHXO00330 501 aa14.39□□□□□ -0.11
SEMA3F-202ENST00000413852 NFKB2Q00653 900 aa14.39□□□□□ -0.11
SEMA3F-202ENST00000413852 CHRNB3Q05901 458 aa14.39□□□□□ -0.11
SEMA3F-202ENST00000413852 NR6A1Q15406 480 aa14.39□□□□□ -0.11
SEMA3F-202ENST00000413852 PSAPL1Q6NUJ1 521 aa14.39□□□□□ -0.11
SEMA3F-202ENST00000413852 HID1Q8IV36 788 aa14.39□□□□□ -0.11
SEMA3F-202ENST00000413852 PAPD5Q8NDF8 572 aaKnown RBP14.39□□□□□ -0.11
SEMA3F-202ENST00000413852 ZNF583Q96ND8 569 aa14.39□□□□□ -0.11
SEMA3F-202ENST00000413852 TINF2Q9BSI4 451 aa14.39□□□□□ -0.11
SEMA3F-202ENST00000413852 ARNT2Q9HBZ2 717 aa14.39□□□□□ -0.11
SEMA3F-202ENST00000413852 VNN3Q9NY84 501 aa14.39□□□□□ -0.11
SEMA3F-202ENST00000413852 TSC22D4Q9Y3Q8 395 aa14.39□□□□□ -0.11
SEMA3F-202ENST00000413852 RALGAPA2Q2PPJ7 1873 aa14.39□□□□□ -0.11
SEMA3F-202ENST00000413852 GSTA4O15217 222 aa14.39□□□□□ -0.11
SEMA3F-202ENST00000413852 AQP9O43315 295 aa14.39□□□□□ -0.11
SEMA3F-202ENST00000413852 KDM1AO60341 852 aa14.39□□□□□ -0.11
SEMA3F-202ENST00000413852 NADKO95544 446 aaPredicted RBP14.39□□□□□ -0.11
SEMA3F-202ENST00000413852 CDH1P12830 882 aa14.39□□□□□ -0.11
SEMA3F-202ENST00000413852 EPHA2P29317 976 aa14.39□□□□□ -0.11
SEMA3F-202ENST00000413852 IL5RAQ01344 420 aa14.39□□□□□ -0.11
SEMA3F-202ENST00000413852 ABRAXAS2Q15018 415 aa14.39□□□□□ -0.11
SEMA3F-202ENST00000413852 MS4A13Q5J8X5 152 aa14.39□□□□□ -0.11
SEMA3F-202ENST00000413852 ANKRD46Q86W74 232 aa14.39□□□□□ -0.11
SEMA3F-202ENST00000413852 EFHBQ8N7U6 833 aa14.39□□□□□ -0.11
SEMA3F-202ENST00000413852 RAB2BQ8WUD1 216 aa14.39□□□□□ -0.11
SEMA3F-202ENST00000413852 ELMO1Q92556 727 aa14.39□□□□□ -0.11
SEMA3F-202ENST00000413852 HTRA1Q92743 480 aa14.39□□□□□ -0.11
SEMA3F-202ENST00000413852 NCLNQ969V3 563 aa14.39□□□□□ -0.11
SEMA3F-202ENST00000413852 CDKN2AIPNLQ96HQ2 116 aa14.39□□□□□ -0.11
SEMA3F-202ENST00000413852 ATP13A3Q9H7F0 1226 aa14.39□□□□□ -0.11
SEMA3F-202ENST00000413852 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.39□□□□□ -0.11
SEMA3F-202ENST00000413852 SCN4AP35499 1836 aa14.39□□□□□ -0.11
SEMA3F-202ENST00000413852 MBLAC1A4D2B0 266 aaPredicted RBP14.39□□□□□ -0.11
SEMA3F-202ENST00000413852 UPK3BL1B0FP48 263 aa14.39□□□□□ -0.11
SEMA3F-202ENST00000413852 UPK3BL2E5RIL1 263 aa14.39□□□□□ -0.11
SEMA3F-202ENST00000413852 FGF10O15520 208 aaPredicted RBP14.39□□□□□ -0.11
SEMA3F-202ENST00000413852 E2F6O75461 281 aa14.39□□□□□ -0.11
SEMA3F-202ENST00000413852 OXSR1O95747 527 aaPredicted RBP14.39□□□□□ -0.11
SEMA3F-202ENST00000413852 BMP4P12644 408 aa14.39□□□□□ -0.11
SEMA3F-202ENST00000413852 TTKP33981 857 aa14.39□□□□□ -0.11
SEMA3F-202ENST00000413852 INAQ16352 499 aa14.39□□□□□ -0.11
SEMA3F-202ENST00000413852 CCL14Q16627 93 aa14.39□□□□□ -0.11
SEMA3F-202ENST00000413852 SLC39A12Q504Y0 691 aa14.39□□□□□ -0.11
SEMA3F-202ENST00000413852 C6orf183Q5T699 404 aa14.39□□□□□ -0.11
SEMA3F-202ENST00000413852 AFMIDQ63HM1 303 aa14.39□□□□□ -0.11
SEMA3F-202ENST00000413852 IQSEC1Q6DN90 963 aa14.39□□□□□ -0.11
SEMA3F-202ENST00000413852 FBXL22Q6P050 247 aa14.39□□□□□ -0.11
SEMA3F-202ENST00000413852 TAF2Q6P1X5 1199 aa14.39□□□□□ -0.11
SEMA3F-202ENST00000413852 GCNT7Q6ZNI0 430 aa14.39□□□□□ -0.11
SEMA3F-202ENST00000413852 GPR142Q7Z601 462 aa14.39□□□□□ -0.11
SEMA3F-202ENST00000413852 STAG3L4Q8TBR4 150 aa14.39□□□□□ -0.11
SEMA3F-202ENST00000413852 ISG20Q96AZ6 181 aaKnown RBP14.39□□□□□ -0.11
SEMA3F-202ENST00000413852 RMDN1Q96DB5 314 aa14.39□□□□□ -0.11
SEMA3F-202ENST00000413852 CGREF1Q99674 301 aa14.39□□□□□ -0.11
SEMA3F-202ENST00000413852 FLRT1Q9NZU1 646 aa14.39□□□□□ -0.11
SEMA3F-202ENST00000413852 SLCO3A1Q9UIG8 710 aa14.39□□□□□ -0.11
SEMA3F-202ENST00000413852 PTCH2Q9Y6C5 1203 aa14.39□□□□□ -0.11
SEMA3F-202ENST00000413852 MOXD2PA6NHM9 499 aa14.38□□□□□ -0.11
SEMA3F-202ENST00000413852 KERAO60938 352 aa14.38□□□□□ -0.11
SEMA3F-202ENST00000413852 F2P00734 622 aa14.38□□□□□ -0.11
SEMA3F-202ENST00000413852 ANXA6P08133 673 aa14.38□□□□□ -0.11
SEMA3F-202ENST00000413852 EMX1Q04741 257 aaPredicted RBP14.38□□□□□ -0.11
SEMA3F-202ENST00000413852 RAPSNQ13702 412 aa14.38□□□□□ -0.11
SEMA3F-202ENST00000413852 UPP1Q16831 310 aa14.38□□□□□ -0.11
SEMA3F-202ENST00000413852 TLK2Q86UE8 772 aa14.38□□□□□ -0.11
SEMA3F-202ENST00000413852 METTL6Q8TCB7 284 aa14.38□□□□□ -0.11
SEMA3F-202ENST00000413852 RSPH1Q8WYR4 309 aa14.38□□□□□ -0.11
SEMA3F-202ENST00000413852 KIAA1191Q96A73 305 aa14.38□□□□□ -0.11
SEMA3F-202ENST00000413852 LINGO1Q96FE5 620 aa14.38□□□□□ -0.11
SEMA3F-202ENST00000413852 RBM47A0AV96 593 aaKnown RBP14.38□□□□□ -0.11
SEMA3F-202ENST00000413852 TLR5O60602 858 aa14.38□□□□□ -0.11
SEMA3F-202ENST00000413852 DEAF1O75398 565 aaPredicted RBP14.38□□□□□ -0.11
SEMA3F-202ENST00000413852 ESRRBO95718 433 aa14.38□□□□□ -0.11
SEMA3F-202ENST00000413852 HTR1EP28566 365 aa14.38□□□□□ -0.11
SEMA3F-202ENST00000413852 PSEN2P49810 448 aa14.38□□□□□ -0.11
SEMA3F-202ENST00000413852 SEPHS1P49903 392 aa14.38□□□□□ -0.11
SEMA3F-202ENST00000413852 STC1P52823 247 aa14.38□□□□□ -0.11
SEMA3F-202ENST00000413852 EEFSECP57772 596 aaKnown RBP14.38□□□□□ -0.11
SEMA3F-202ENST00000413852 MRNIPQ6NTE8 343 aa14.38□□□□□ -0.11
SEMA3F-202ENST00000413852 CYP20A1Q6UW02 462 aa14.38□□□□□ -0.11
SEMA3F-202ENST00000413852 DET1Q7L5Y6 550 aa14.38□□□□□ -0.11
SEMA3F-202ENST00000413852 ZFAND4Q86XD8 727 aa14.38□□□□□ -0.11
SEMA3F-202ENST00000413852 RPRD1AQ96P16 312 aaPredicted RBP14.38□□□□□ -0.11
SEMA3F-202ENST00000413852 CORO1BQ9BR76 489 aa14.38□□□□□ -0.11
SEMA3F-202ENST00000413852 KCNH4Q9UQ05 1017 aa14.38□□□□□ -0.11
SEMA3F-202ENST00000413852 PPP2R3BQ9Y5P8 575 aa14.38□□□□□ -0.11
SEMA3F-202ENST00000413852 COMMD10Q9Y6G5 202 aa14.38□□□□□ -0.11
SEMA3F-202ENST00000413852 IQCA1LA6NCM1 817 aa14.37□□□□□ -0.11
SEMA3F-202ENST00000413852 CLDN25C9JDP6 229 aa14.37□□□□□ -0.11
SEMA3F-202ENST00000413852 SLC1A7O00341 560 aa14.37□□□□□ -0.11
SEMA3F-202ENST00000413852 GPR182O15218 404 aa14.37□□□□□ -0.11
SEMA3F-202ENST00000413852 FADS2O95864 444 aaKnown RBP14.37□□□□□ -0.11
SEMA3F-202ENST00000413852 PRR35P0CG20 571 aa14.37□□□□□ -0.11
SEMA3F-202ENST00000413852 MYCLP1P12525 358 aaPredicted RBP14.37□□□□□ -0.11
SEMA3F-202ENST00000413852 SLC2A4P14672 509 aa14.37□□□□□ -0.11
SEMA3F-202ENST00000413852 PCSK1P29120 753 aa14.37□□□□□ -0.11
SEMA3F-202ENST00000413852 RPL38P63173 70 aaKnown RBP14.37□□□□□ -0.11
SEMA3F-202ENST00000413852 OXA1LQ15070 435 aa14.37□□□□□ -0.11
SEMA3F-202ENST00000413852 FAM98BQ52LJ0 330 aaKnown RBP14.37□□□□□ -0.11
SEMA3F-202ENST00000413852 GPRIN3Q6ZVF9 776 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms