RNA–Protein interactions for RNA: ENST00000413642.7

VEGFA-207, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-207ENST00000413642 CCNL2Q96S94 520 aaPredicted RBP25.77■■□□□ 1.72
VEGFA-207ENST00000413642 C19orf43Q9BQ61 176 aa25.77■■□□□ 1.72
VEGFA-207ENST00000413642 EPB41L1Q9H4G0 881 aa25.77■■□□□ 1.72
VEGFA-207ENST00000413642 GRPEL1Q9HAV7 217 aa25.77■■□□□ 1.72
VEGFA-207ENST00000413642 IMP3Q9NV31 184 aaKnown RBP25.77■■□□□ 1.72
VEGFA-207ENST00000413642 PCDHGA3Q9Y5H0 932 aa25.77■■□□□ 1.72
VEGFA-207ENST00000413642 PTPRQQ9UMZ3 2332 aa25.77■■□□□ 1.72
VEGFA-207ENST00000413642 NBEAQ8NFP9 2946 aa25.76■■□□□ 1.71
VEGFA-207ENST00000413642 TRBV5-4A0A0C4DH59 114 aa25.76■■□□□ 1.71
VEGFA-207ENST00000413642 H7C0S8 307 aa25.76■■□□□ 1.71
VEGFA-207ENST00000413642 KIF1CO43896 1103 aaKnown RBP25.76■■□□□ 1.71
VEGFA-207ENST00000413642 CEP104O60308 925 aa25.76■■□□□ 1.71
VEGFA-207ENST00000413642 KCNJ1P48048 391 aa25.76■■□□□ 1.71
VEGFA-207ENST00000413642 SEMA5AQ13591 1074 aa25.76■■□□□ 1.71
VEGFA-207ENST00000413642 GPR33Q49SQ1 333 aa25.76■■□□□ 1.71
VEGFA-207ENST00000413642 PPP1R21Q6ZMI0 780 aa25.76■■□□□ 1.71
VEGFA-207ENST00000413642 CCDC81Q6ZN84 652 aa25.76■■□□□ 1.71
VEGFA-207ENST00000413642 DTX1Q86Y01 620 aa25.76■■□□□ 1.71
VEGFA-207ENST00000413642 PLXDC1Q8IUK5 500 aa25.76■■□□□ 1.71
VEGFA-207ENST00000413642 CFAP206Q8IYR0 622 aa25.76■■□□□ 1.71
VEGFA-207ENST00000413642 CCDC89Q8N998 374 aa25.76■■□□□ 1.71
VEGFA-207ENST00000413642 STYXQ8WUJ0 223 aa25.76■■□□□ 1.71
VEGFA-207ENST00000413642 ZDHHC3Q9NYG2 299 aa25.76■■□□□ 1.71
VEGFA-207ENST00000413642 MN1Q10571 1320 aaPredicted RBP25.76■■□□□ 1.71
VEGFA-207ENST00000413642 B4E171 279 aa25.75■■□□□ 1.71
VEGFA-207ENST00000413642 E7EVH7 732 aa25.75■■□□□ 1.71
VEGFA-207ENST00000413642 CAPN5O15484 640 aaPredicted RBP25.75■■□□□ 1.71
VEGFA-207ENST00000413642 SUN1O94901 812 aa25.75■■□□□ 1.71
VEGFA-207ENST00000413642 C9P02748 559 aa25.75■■□□□ 1.71
VEGFA-207ENST00000413642 ATP1B2P14415 290 aaPredicted RBP25.75■■□□□ 1.71
VEGFA-207ENST00000413642 ACRV1P26436 265 aa25.75■■□□□ 1.71
VEGFA-207ENST00000413642 TSPAN7P41732 249 aa25.75■■□□□ 1.71
VEGFA-207ENST00000413642 PPP1CAP62136 330 aa25.75■■□□□ 1.71
VEGFA-207ENST00000413642 CDH17Q12864 832 aa25.75■■□□□ 1.71
VEGFA-207ENST00000413642 LINC00615Q96LM1 132 aaPredicted RBP25.75■■□□□ 1.71
VEGFA-207ENST00000413642 C9orf72Q96LT7 481 aa25.75■■□□□ 1.71
VEGFA-207ENST00000413642 UBL7Q96S82 380 aaPredicted RBP25.75■■□□□ 1.71
VEGFA-207ENST00000413642 B3GNT4Q9C0J1 378 aa25.75■■□□□ 1.71
VEGFA-207ENST00000413642 APMAPQ9HDC9 416 aa25.75■■□□□ 1.71
VEGFA-207ENST00000413642 SLC2A6Q9UGQ3 507 aa25.75■■□□□ 1.71
VEGFA-207ENST00000413642 CACNA1GO43497 2377 aa25.75■■□□□ 1.71
VEGFA-207ENST00000413642 IGLV3-16A0A075B6K0 115 aa25.74■■□□□ 1.71
VEGFA-207ENST00000413642 CCDC162PA2VCL2 907 aa25.74■■□□□ 1.71
VEGFA-207ENST00000413642 ERI2A8K979 691 aaKnown RBP25.74■■□□□ 1.71
VEGFA-207ENST00000413642 K7ENP7 123 aa25.74■■□□□ 1.71
VEGFA-207ENST00000413642 RALBP11234 206 aa25.74■■□□□ 1.71
VEGFA-207ENST00000413642 MTHFD1P11586 935 aaKnown RBP25.74■■□□□ 1.71
VEGFA-207ENST00000413642 PSMA3P25788 255 aa25.74■■□□□ 1.71
VEGFA-207ENST00000413642 PRLHRP49683 370 aa25.74■■□□□ 1.71
VEGFA-207ENST00000413642 MC2RQ01718 297 aa25.74■■□□□ 1.71
VEGFA-207ENST00000413642 DBN1Q16643 649 aa25.74■■□□□ 1.71
VEGFA-207ENST00000413642 INO80CQ6PI98 192 aaPredicted RBP25.74■■□□□ 1.71
VEGFA-207ENST00000413642 PCSK4Q6UW60 755 aa25.74■■□□□ 1.71
VEGFA-207ENST00000413642 RBM12BQ8IXT5 1001 aaKnown RBP25.74■■□□□ 1.71
VEGFA-207ENST00000413642 CLDN19Q8N6F1 224 aa25.74■■□□□ 1.71
VEGFA-207ENST00000413642 RNF31Q96EP0 1072 aa25.74■■□□□ 1.71
VEGFA-207ENST00000413642 RMDN2Q96LZ7 410 aa25.74■■□□□ 1.71
VEGFA-207ENST00000413642 C12orf66Q96MD2 445 aa25.74■■□□□ 1.71
VEGFA-207ENST00000413642 ZNF778Q96MU6 729 aa25.74■■□□□ 1.71
VEGFA-207ENST00000413642 DDA1Q9BW61 102 aa25.74■■□□□ 1.71
VEGFA-207ENST00000413642 CASS4Q9NQ75 786 aa25.74■■□□□ 1.71
VEGFA-207ENST00000413642 PAK5Q9P286 719 aa25.74■■□□□ 1.71
VEGFA-207ENST00000413642 DRG1Q9Y295 367 aaKnown RBP25.74■■□□□ 1.71
VEGFA-207ENST00000413642 ZNF106Q9H2Y7 1883 aaKnown RBP25.73■■□□□ 1.71
VEGFA-207ENST00000413642 TEX51A0A1B0GUA7 166 aa25.73■■□□□ 1.71
VEGFA-207ENST00000413642 CFAP99D6REC4 459 aa25.73■■□□□ 1.71
VEGFA-207ENST00000413642 APRTP07741 180 aa25.73■■□□□ 1.71
VEGFA-207ENST00000413642 WT1P19544 449 aaPredicted RBP25.73■■□□□ 1.71
VEGFA-207ENST00000413642 CAPZBP47756 277 aa25.73■■□□□ 1.71
VEGFA-207ENST00000413642 SEPHS1P49903 392 aa25.73■■□□□ 1.71
VEGFA-207ENST00000413642 CACNG1Q06432 222 aa25.73■■□□□ 1.71
VEGFA-207ENST00000413642 KIAA1614Q5VZ46 1190 aa25.73■■□□□ 1.71
VEGFA-207ENST00000413642 OR13J1Q8NGT2 312 aa25.73■■□□□ 1.71
VEGFA-207ENST00000413642 PRSS21Q9Y6M0 314 aa25.73■■□□□ 1.71
VEGFA-207ENST00000413642 NRDCO43847 1150 aa25.72■■□□□ 1.71
VEGFA-207ENST00000413642 MSNP26038 577 aaKnown RBP25.72■■□□□ 1.71
VEGFA-207ENST00000413642 SKIDA1Q1XH10 827 aa25.72■■□□□ 1.71
VEGFA-207ENST00000413642 DCAF12Q5T6F0 453 aa25.72■■□□□ 1.71
VEGFA-207ENST00000413642 IRGCQ6NXR0 463 aa25.72■■□□□ 1.71
VEGFA-207ENST00000413642 DRICH1Q6PGQ1 229 aaPredicted RBP25.72■■□□□ 1.71
VEGFA-207ENST00000413642 FAM92BQ6ZTR7 304 aa25.72■■□□□ 1.71
VEGFA-207ENST00000413642 HEXDCQ8WVB3 486 aa25.72■■□□□ 1.71
VEGFA-207ENST00000413642 SNRNP27Q8WVK2 155 aaKnown RBP25.72■■□□□ 1.71
VEGFA-207ENST00000413642 ACSL5Q9ULC5 683 aa25.72■■□□□ 1.71
VEGFA-207ENST00000413642 PCDHB11Q9Y5F2 797 aa25.72■■□□□ 1.71
VEGFA-207ENST00000413642 IQCJ-SCHIP1C9J366 451 aaPredicted RBP25.71■■□□□ 1.71
VEGFA-207ENST00000413642 PRB1P04280 392 aa25.71■■□□□ 1.71
VEGFA-207ENST00000413642 ANKRD34CP0C6C1 535 aa25.71■■□□□ 1.71
VEGFA-207ENST00000413642 CD82P27701 267 aa25.71■■□□□ 1.71
VEGFA-207ENST00000413642 FOXN2P32314 431 aa25.71■■□□□ 1.71
VEGFA-207ENST00000413642 ZNF658BQ4V348 819 aaPredicted RBP25.71■■□□□ 1.71
VEGFA-207ENST00000413642 MANEAQ5SRI9 462 aa25.71■■□□□ 1.71
VEGFA-207ENST00000413642 TSTD2Q5T7W7 516 aa25.71■■□□□ 1.71
VEGFA-207ENST00000413642 CAPRIN2Q6IMN6 1127 aaKnown RBP25.71■■□□□ 1.71
VEGFA-207ENST00000413642 PRELID2Q8N945 189 aa25.71■■□□□ 1.71
VEGFA-207ENST00000413642 HM13Q8TCT9 377 aa25.71■■□□□ 1.71
VEGFA-207ENST00000413642 NKD1Q969G9 470 aa25.71■■□□□ 1.71
VEGFA-207ENST00000413642 HDAC10Q969S8 669 aa25.71■■□□□ 1.71
VEGFA-207ENST00000413642 SIDT1Q9NXL6 827 aaKnown RBP25.71■■□□□ 1.71
VEGFA-207ENST00000413642 SMARCAL1Q9NZC9 954 aa25.71■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms