RNA–Protein interactions for RNA: ENST00000412686.5

CPSF4-202, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 745 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-202ENST00000412686 RHPN2P1A8MT19 583 aa7.56□□□□□ -1.2
CPSF4-202ENST00000412686 KIF2AO00139 706 aaPredicted RBP7.56□□□□□ -1.2
CPSF4-202ENST00000412686 NUDT21O43809 227 aaKnown RBP7.56□□□□□ -1.2
CPSF4-202ENST00000412686 USP1O94782 785 aa7.56□□□□□ -1.2
CPSF4-202ENST00000412686 MT-CO3P00414 261 aa7.56□□□□□ -1.2
CPSF4-202ENST00000412686 GP1BAP07359 652 aa7.56□□□□□ -1.2
CPSF4-202ENST00000412686 ERVK-10P10266 1014 aa7.56□□□□□ -1.2
CPSF4-202ENST00000412686 PGAM1P18669 254 aa7.56□□□□□ -1.2
CPSF4-202ENST00000412686 IDSP22304 550 aa7.56□□□□□ -1.2
CPSF4-202ENST00000412686 PDHA2P29803 388 aa7.56□□□□□ -1.2
CPSF4-202ENST00000412686 ALDH4A1P30038 563 aa7.56□□□□□ -1.2
CPSF4-202ENST00000412686 CSF2RBP32927 897 aa7.56□□□□□ -1.2
CPSF4-202ENST00000412686 NSG1P42857 185 aa7.56□□□□□ -1.2
CPSF4-202ENST00000412686 FASLGP48023 281 aa7.56□□□□□ -1.2
CPSF4-202ENST00000412686 PDX1P52945 283 aa7.56□□□□□ -1.2
CPSF4-202ENST00000412686 EIF3BP55884 814 aaKnown RBP7.56□□□□□ -1.2
CPSF4-202ENST00000412686 UBE2IP63279 158 aaKnown RBP7.56□□□□□ -1.2
CPSF4-202ENST00000412686 HHEXQ03014 270 aa7.56□□□□□ -1.2
CPSF4-202ENST00000412686 PDIA2Q13087 525 aaKnown RBP7.56□□□□□ -1.2
CPSF4-202ENST00000412686 TARDBPQ13148 414 aaKnown RBP eCLIP7.56□□□□□ -1.2
CPSF4-202ENST00000412686 CTBP1Q13363 440 aa7.56□□□□□ -1.2
CPSF4-202ENST00000412686 BIRC2Q13490 618 aa7.56□□□□□ -1.2
CPSF4-202ENST00000412686 BOP1Q14137 746 aaKnown RBP7.56□□□□□ -1.2
CPSF4-202ENST00000412686 CRYMQ14894 314 aa7.56□□□□□ -1.2
CPSF4-202ENST00000412686 HIF1AQ16665 826 aa7.56□□□□□ -1.2
CPSF4-202ENST00000412686 TYSND1Q2T9J0 566 aa7.56□□□□□ -1.2
CPSF4-202ENST00000412686 AMZ1Q400G9 498 aa7.56□□□□□ -1.2
CPSF4-202ENST00000412686 CTSL3PQ5NE16 218 aa7.56□□□□□ -1.2
CPSF4-202ENST00000412686 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.56□□□□□ -1.2
CPSF4-202ENST00000412686 CDCP2Q5VXM1 449 aa7.56□□□□□ -1.2
CPSF4-202ENST00000412686 METRNLQ641Q3 311 aa7.56□□□□□ -1.2
CPSF4-202ENST00000412686 DUPD1Q68J44 220 aa7.56□□□□□ -1.2
CPSF4-202ENST00000412686 ZNF470Q6ECI4 717 aa7.56□□□□□ -1.2
CPSF4-202ENST00000412686 NEPROQ6NW34 567 aa7.56□□□□□ -1.2
CPSF4-202ENST00000412686 C8orf74Q6P047 294 aa7.56□□□□□ -1.2
CPSF4-202ENST00000412686 TRMT10BQ6PF06 316 aaKnown RBP7.56□□□□□ -1.2
CPSF4-202ENST00000412686 ABRAXAS1Q6UWZ7 409 aa7.56□□□□□ -1.2
CPSF4-202ENST00000412686 PACS1Q6VY07 963 aa7.56□□□□□ -1.2
CPSF4-202ENST00000412686 CERS6Q6ZMG9 384 aa7.56□□□□□ -1.2
CPSF4-202ENST00000412686 UNC5AQ6ZN44 842 aa7.56□□□□□ -1.2
CPSF4-202ENST00000412686 CAPN12Q6ZSI9 719 aa7.56□□□□□ -1.2
CPSF4-202ENST00000412686 CENPUQ71F23 418 aa7.56□□□□□ -1.2
CPSF4-202ENST00000412686 MAATS1Q7Z4T9 603 aa7.56□□□□□ -1.2
CPSF4-202ENST00000412686 ZNF438Q7Z4V0 828 aa7.56□□□□□ -1.2
CPSF4-202ENST00000412686 SPRED1Q7Z699 444 aa7.56□□□□□ -1.2
CPSF4-202ENST00000412686 B3GNT8Q7Z7M8 397 aa7.56□□□□□ -1.2
CPSF4-202ENST00000412686 FAM136AQ96C01 138 aa7.56□□□□□ -1.2
CPSF4-202ENST00000412686 SGSM3Q96HU1 749 aa7.56□□□□□ -1.2
CPSF4-202ENST00000412686 ZNF514Q96K75 400 aaPredicted RBP7.56□□□□□ -1.2
CPSF4-202ENST00000412686 RMDN2Q96LZ7 410 aa7.56□□□□□ -1.2
CPSF4-202ENST00000412686 INSM2Q96T92 566 aaPredicted RBP7.56□□□□□ -1.2
CPSF4-202ENST00000412686 NRTNQ99748 197 aa7.56□□□□□ -1.2
CPSF4-202ENST00000412686 EBNA1BP2Q99848 306 aaKnown RBP7.56□□□□□ -1.2
CPSF4-202ENST00000412686 CCM2Q9BSQ5 444 aa7.56□□□□□ -1.2
CPSF4-202ENST00000412686 CARD6Q9BX69 1037 aa7.56□□□□□ -1.2
CPSF4-202ENST00000412686 FOXP3Q9BZS1 431 aa7.56□□□□□ -1.2
CPSF4-202ENST00000412686 ABCG4Q9H172 646 aa7.56□□□□□ -1.2
CPSF4-202ENST00000412686 P2RY12Q9H244 342 aa7.56□□□□□ -1.2
CPSF4-202ENST00000412686 LRRN3Q9H3W5 708 aa7.56□□□□□ -1.2
CPSF4-202ENST00000412686 RDH14Q9HBH5 336 aa7.56□□□□□ -1.2
CPSF4-202ENST00000412686 FBXO6Q9NRD1 293 aaPredicted RBP7.56□□□□□ -1.2
CPSF4-202ENST00000412686 C20orf96Q9NUD7 363 aaPredicted RBP7.56□□□□□ -1.2
CPSF4-202ENST00000412686 IMP3Q9NV31 184 aaKnown RBP7.56□□□□□ -1.2
CPSF4-202ENST00000412686 EVA1BQ9NVM1 165 aa7.56□□□□□ -1.2
CPSF4-202ENST00000412686 NCKIPSDQ9NZQ3 722 aa7.56□□□□□ -1.2
CPSF4-202ENST00000412686 TMEM9Q9P0T7 183 aa7.56□□□□□ -1.2
CPSF4-202ENST00000412686 CPNE7Q9UBL6 633 aa7.56□□□□□ -1.2
CPSF4-202ENST00000412686 CLCA2Q9UQC9 943 aa7.56□□□□□ -1.2
CPSF4-202ENST00000412686 VPS9D1Q9Y2B5 631 aa7.56□□□□□ -1.2
CPSF4-202ENST00000412686 CRYL1Q9Y2S2 319 aa7.56□□□□□ -1.2
CPSF4-202ENST00000412686 TEX264Q9Y6I9 313 aa7.56□□□□□ -1.2
CPSF4-202ENST00000412686 CNOT1A5YKK6 2376 aaKnown RBP7.55□□□□□ -1.2
CPSF4-202ENST00000412686 GOLGA4Q13439 2230 aaKnown RBP7.55□□□□□ -1.2
CPSF4-202ENST00000412686 SPTBN4Q9H254 2564 aa7.55□□□□□ -1.2
CPSF4-202ENST00000412686 IGHV1OR21-1A0A087WYE8 117 aa7.55□□□□□ -1.2
CPSF4-202ENST00000412686 E7ESA3 106 aa7.55□□□□□ -1.2
CPSF4-202ENST00000412686 NTN3O00634 580 aaPredicted RBP7.55□□□□□ -1.2
CPSF4-202ENST00000412686 PRMT5O14744 637 aaPredicted RBP7.55□□□□□ -1.2
CPSF4-202ENST00000412686 NIPSNAP2O75323 286 aa7.55□□□□□ -1.2
CPSF4-202ENST00000412686 CSO75390 466 aaKnown RBP7.55□□□□□ -1.2
CPSF4-202ENST00000412686 NDUFS3O75489 264 aa7.55□□□□□ -1.2
CPSF4-202ENST00000412686 PIAS1O75925 651 aa7.55□□□□□ -1.2
CPSF4-202ENST00000412686 AP2A2O94973 939 aa7.55□□□□□ -1.2
CPSF4-202ENST00000412686 TRIM16O95361 564 aa7.55□□□□□ -1.2
CPSF4-202ENST00000412686 TUBB4AP04350 444 aa7.55□□□□□ -1.2
CPSF4-202ENST00000412686 JUPP14923 745 aa7.55□□□□□ -1.2
CPSF4-202ENST00000412686 VCLP18206 1134 aa7.55□□□□□ -1.2
CPSF4-202ENST00000412686 PAMP19021 973 aa7.55□□□□□ -1.2
CPSF4-202ENST00000412686 OGNP20774 298 aaKnown RBP7.55□□□□□ -1.2
CPSF4-202ENST00000412686 MPSTP25325 297 aa7.55□□□□□ -1.2
CPSF4-202ENST00000412686 FMO4P31512 558 aa7.55□□□□□ -1.2
CPSF4-202ENST00000412686 CCR7P32248 378 aa7.55□□□□□ -1.2
CPSF4-202ENST00000412686 SLC1A2P43004 574 aa7.55□□□□□ -1.2
CPSF4-202ENST00000412686 ABCG1P45844 678 aa7.55□□□□□ -1.2
CPSF4-202ENST00000412686 MAPK9P45984 424 aa7.55□□□□□ -1.2
CPSF4-202ENST00000412686 PLTPP55058 493 aa7.55□□□□□ -1.2
CPSF4-202ENST00000412686 ARL4CP56559 192 aa7.55□□□□□ -1.2
CPSF4-202ENST00000412686 E2F1Q01094 437 aa7.55□□□□□ -1.2
CPSF4-202ENST00000412686 CFHR1Q03591 330 aa7.55□□□□□ -1.2
CPSF4-202ENST00000412686 THOC5Q13769 683 aaKnown RBP7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms