RNA–Protein interactions for RNA: ENST00000412157.2

SNRNP35-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best) BASIC

Gene SNRNP35, Length 1,140 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-202ENST00000412157 NEK5Q6P3R8 708 aa11.43□□□□□ -0.58
SNRNP35-202ENST00000412157 NAPRTQ6XQN6 538 aa11.43□□□□□ -0.58
SNRNP35-202ENST00000412157 TRIM67Q6ZTA4 783 aa11.43□□□□□ -0.58
SNRNP35-202ENST00000412157 TBC1D3Q8IZP1 549 aaPredicted RBP11.43□□□□□ -0.58
SNRNP35-202ENST00000412157 KIRREL3Q8IZU9 778 aa11.43□□□□□ -0.58
SNRNP35-202ENST00000412157 PGBD3Q8N328 593 aa11.43□□□□□ -0.58
SNRNP35-202ENST00000412157 SYNPOQ8N3V7 929 aa11.43□□□□□ -0.58
SNRNP35-202ENST00000412157 PTGR2Q8N8N7 351 aaPredicted RBP11.43□□□□□ -0.58
SNRNP35-202ENST00000412157 RASGEF1AQ8N9B8 481 aa11.43□□□□□ -0.58
SNRNP35-202ENST00000412157 PIWIL2Q8TC59 973 aaKnown RBP11.43□□□□□ -0.58
SNRNP35-202ENST00000412157 C10orf82Q8WW14 230 aa11.43□□□□□ -0.58
SNRNP35-202ENST00000412157 L3HYPDHQ96EM0 354 aa11.43□□□□□ -0.58
SNRNP35-202ENST00000412157 HIC2Q96JB3 615 aa11.43□□□□□ -0.58
SNRNP35-202ENST00000412157 ZNF514Q96K75 400 aaPredicted RBP11.43□□□□□ -0.58
SNRNP35-202ENST00000412157 CNDP1Q96KN2 507 aa11.43□□□□□ -0.58
SNRNP35-202ENST00000412157 MRGPRX1Q96LB2 322 aa11.43□□□□□ -0.58
SNRNP35-202ENST00000412157 TMEM237Q96Q45 408 aa11.43□□□□□ -0.58
SNRNP35-202ENST00000412157 PHOX2BQ99453 314 aa11.43□□□□□ -0.58
SNRNP35-202ENST00000412157 ILKAPQ9H0C8 392 aaPredicted RBP11.43□□□□□ -0.58
SNRNP35-202ENST00000412157 KDM4CQ9H3R0 1056 aa11.43□□□□□ -0.58
SNRNP35-202ENST00000412157 EML4Q9HC35 981 aaKnown RBP11.43□□□□□ -0.58
SNRNP35-202ENST00000412157 TRIM39Q9HCM9 518 aa11.43□□□□□ -0.58
SNRNP35-202ENST00000412157 CD248Q9HCU0 757 aa11.43□□□□□ -0.58
SNRNP35-202ENST00000412157 CD274Q9NZQ7 290 aa11.43□□□□□ -0.58
SNRNP35-202ENST00000412157 MARCOQ9UEW3 520 aaPredicted RBP11.43□□□□□ -0.58
SNRNP35-202ENST00000412157 DCTN4Q9UJW0 460 aa11.43□□□□□ -0.58
SNRNP35-202ENST00000412157 IKZF3Q9UKT9 509 aa11.43□□□□□ -0.58
SNRNP35-202ENST00000412157 RAP2CQ9Y3L5 183 aa11.43□□□□□ -0.58
SNRNP35-202ENST00000412157 A0A0G2JND7 137 aa11.42□□□□□ -0.58
SNRNP35-202ENST00000412157 A0A1W2PQU0 124 aa11.42□□□□□ -0.58
SNRNP35-202ENST00000412157 LRRC72A6NJI9 287 aa11.42□□□□□ -0.58
SNRNP35-202ENST00000412157 STX16-NPEPL1H3BU86 382 aa11.42□□□□□ -0.58
SNRNP35-202ENST00000412157 K7ESM1 405 aa11.42□□□□□ -0.58
SNRNP35-202ENST00000412157 STX16O14662 325 aa11.42□□□□□ -0.58
SNRNP35-202ENST00000412157 DCTN3O75935 186 aa11.42□□□□□ -0.58
SNRNP35-202ENST00000412157 KIAA0754O94854 1291 aa11.42□□□□□ -0.58
SNRNP35-202ENST00000412157 SUPT7LO94864 414 aa11.42□□□□□ -0.58
SNRNP35-202ENST00000412157 GSTM1P09488 218 aa11.42□□□□□ -0.58
SNRNP35-202ENST00000412157 CHRNB1P11230 501 aa11.42□□□□□ -0.58
SNRNP35-202ENST00000412157 GABRG2P18507 467 aa11.42□□□□□ -0.58
SNRNP35-202ENST00000412157 IMPDH1P20839 514 aa11.42□□□□□ -0.58
SNRNP35-202ENST00000412157 PBLDP30039 288 aaPredicted RBP11.42□□□□□ -0.58
SNRNP35-202ENST00000412157 HERVK_113P63132 956 aa11.42□□□□□ -0.58
SNRNP35-202ENST00000412157 GSTM4Q03013 218 aa11.42□□□□□ -0.58
SNRNP35-202ENST00000412157 HSPA14Q0VDF9 509 aa11.42□□□□□ -0.58
SNRNP35-202ENST00000412157 UBXN2BQ14CS0 331 aa11.42□□□□□ -0.58
SNRNP35-202ENST00000412157 IRF4Q15306 451 aa11.42□□□□□ -0.58
SNRNP35-202ENST00000412157 PFKFB4Q16877 469 aa11.42□□□□□ -0.58
SNRNP35-202ENST00000412157 MAP7D1Q3KQU3 841 aa11.42□□□□□ -0.58
SNRNP35-202ENST00000412157 BCL7AQ4VC05 210 aa11.42□□□□□ -0.58
SNRNP35-202ENST00000412157 ZNF678Q5SXM1 525 aa11.42□□□□□ -0.58
SNRNP35-202ENST00000412157 TMEM220Q6QAJ8 160 aa11.42□□□□□ -0.58
SNRNP35-202ENST00000412157 TMEM92Q6UXU6 159 aa11.42□□□□□ -0.58
SNRNP35-202ENST00000412157 NEK10Q6ZWH5 1172 aa11.42□□□□□ -0.58
SNRNP35-202ENST00000412157 ADGRG6Q86SQ4 1221 aa11.42□□□□□ -0.58
SNRNP35-202ENST00000412157 TRIM74Q86UV6 250 aa11.42□□□□□ -0.58
SNRNP35-202ENST00000412157 FAM124AQ86V42 546 aa11.42□□□□□ -0.58
SNRNP35-202ENST00000412157 HEATR4Q86WZ0 1026 aa11.42□□□□□ -0.58
SNRNP35-202ENST00000412157 HORMAD1Q86X24 394 aa11.42□□□□□ -0.58
SNRNP35-202ENST00000412157 TRAPPC5Q8IUR0 188 aa11.42□□□□□ -0.58
SNRNP35-202ENST00000412157 PELI3Q8N2H9 469 aa11.42□□□□□ -0.58
SNRNP35-202ENST00000412157 PRSS33Q8NF86 280 aa11.42□□□□□ -0.58
SNRNP35-202ENST00000412157 FLCNQ8NFG4 579 aa11.42□□□□□ -0.58
SNRNP35-202ENST00000412157 RFWD2Q8NHY2 731 aa11.42□□□□□ -0.58
SNRNP35-202ENST00000412157 SKA2Q8WVK7 121 aaPredicted RBP11.42□□□□□ -0.58
SNRNP35-202ENST00000412157 FUBP1Q96AE4 644 aaKnown RBP11.42□□□□□ -0.58
SNRNP35-202ENST00000412157 TMEM159Q96B96 161 aa11.42□□□□□ -0.58
SNRNP35-202ENST00000412157 SORT1Q99523 831 aa11.42□□□□□ -0.58
SNRNP35-202ENST00000412157 CCM2Q9BSQ5 444 aa11.42□□□□□ -0.58
SNRNP35-202ENST00000412157 TRMOQ9BU70 441 aa11.42□□□□□ -0.58
SNRNP35-202ENST00000412157 TMEM120AQ9BXJ8 343 aa11.42□□□□□ -0.58
SNRNP35-202ENST00000412157 ERVK-6Q9BXR3 956 aa11.42□□□□□ -0.58
SNRNP35-202ENST00000412157 SLC17A9Q9BYT1 436 aa11.42□□□□□ -0.58
SNRNP35-202ENST00000412157 TRIM54Q9BYV2 358 aa11.42□□□□□ -0.58
SNRNP35-202ENST00000412157 C20orf27Q9GZN8 174 aa11.42□□□□□ -0.58
SNRNP35-202ENST00000412157 WWP1Q9H0M0 922 aa11.42□□□□□ -0.58
SNRNP35-202ENST00000412157 OR2AG1Q9H205 316 aa11.42□□□□□ -0.58
SNRNP35-202ENST00000412157 ZNF395Q9H8N7 513 aaPredicted RBP11.42□□□□□ -0.58
SNRNP35-202ENST00000412157 LTB4R2Q9NPC1 389 aa11.42□□□□□ -0.58
SNRNP35-202ENST00000412157 PHPT1Q9NRX4 125 aaPredicted RBP11.42□□□□□ -0.58
SNRNP35-202ENST00000412157 WNT16Q9UBV4 365 aa11.42□□□□□ -0.58
SNRNP35-202ENST00000412157 CNOT6Q9ULM6 557 aaKnown RBP11.42□□□□□ -0.58
SNRNP35-202ENST00000412157 ZFR2Q9UPR6 939 aaKnown RBP11.42□□□□□ -0.58
SNRNP35-202ENST00000412157 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.42□□□□□ -0.58
SNRNP35-202ENST00000412157 OARD1Q9Y530 152 aa11.42□□□□□ -0.58
SNRNP35-202ENST00000412157 ZNF318Q5VUA4 2279 aa11.41□□□□□ -0.58
SNRNP35-202ENST00000412157 TMEM221A6NGB7 291 aa11.41□□□□□ -0.58
SNRNP35-202ENST00000412157 NCF1BA6NI72 391 aaPredicted RBP11.41□□□□□ -0.58
SNRNP35-202ENST00000412157 NCF1CA8MVU1 366 aaPredicted RBP11.41□□□□□ -0.58
SNRNP35-202ENST00000412157 CHURC1-FNTBB4DL54 471 aa11.41□□□□□ -0.58
SNRNP35-202ENST00000412157 SLCO1B7G3V0H7 640 aa11.41□□□□□ -0.58
SNRNP35-202ENST00000412157 M0R296 226 aa11.41□□□□□ -0.58
SNRNP35-202ENST00000412157 SGTAO43765 313 aa11.41□□□□□ -0.58
SNRNP35-202ENST00000412157 NUAK1O60285 661 aa11.41□□□□□ -0.58
SNRNP35-202ENST00000412157 C8GP07360 202 aa11.41□□□□□ -0.58
SNRNP35-202ENST00000412157 C7P10643 843 aa11.41□□□□□ -0.58
SNRNP35-202ENST00000412157 MTHFD2P13995 350 aa11.41□□□□□ -0.58
SNRNP35-202ENST00000412157 NCF1P14598 390 aaPredicted RBP11.41□□□□□ -0.58
SNRNP35-202ENST00000412157 MPSTP25325 297 aa11.41□□□□□ -0.58
SNRNP35-202ENST00000412157 TARSP26639 723 aaKnown RBP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms