RNA–Protein interactions for RNA: ENST00000409953.5

UBE2F-204, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 3 BASIC

Gene UBE2F, Length 924 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-204ENST00000409953 C11orf91Q3C1V1 193 aa6.81□□□□□ -1.32
UBE2F-204ENST00000409953 PLA2G4EQ3MJ16 856 aa6.81□□□□□ -1.32
UBE2F-204ENST00000409953 CATSPEREQ5SY80 951 aa6.81□□□□□ -1.32
UBE2F-204ENST00000409953 SYPL2Q5VXT5 272 aa6.81□□□□□ -1.32
UBE2F-204ENST00000409953 IYDQ6PHW0 289 aa6.81□□□□□ -1.32
UBE2F-204ENST00000409953 ARSKQ6UWY0 536 aa6.81□□□□□ -1.32
UBE2F-204ENST00000409953 C12orf54Q6X4T0 127 aa6.81□□□□□ -1.32
UBE2F-204ENST00000409953 TFAP2DQ7Z6R9 452 aa6.81□□□□□ -1.32
UBE2F-204ENST00000409953 SETD3Q86TU7 594 aaPredicted RBP6.81□□□□□ -1.32
UBE2F-204ENST00000409953 XXYLT1Q8NBI6 393 aa6.81□□□□□ -1.32
UBE2F-204ENST00000409953 MNS1Q8NEH6 495 aa6.81□□□□□ -1.32
UBE2F-204ENST00000409953 OR8K5Q8NH50 307 aa6.81□□□□□ -1.32
UBE2F-204ENST00000409953 UBA3Q8TBC4 463 aa6.81□□□□□ -1.32
UBE2F-204ENST00000409953 GIMAP1Q8WWP7 306 aa6.81□□□□□ -1.32
UBE2F-204ENST00000409953 HDAC10Q969S8 669 aa6.81□□□□□ -1.32
UBE2F-204ENST00000409953 ZNF501Q96CX3 271 aaPredicted RBP6.81□□□□□ -1.32
UBE2F-204ENST00000409953 TBC1D31Q96DN5 1066 aa6.81□□□□□ -1.32
UBE2F-204ENST00000409953 ZDHHC12Q96GR4 267 aa6.81□□□□□ -1.32
UBE2F-204ENST00000409953 LMF1Q96S06 567 aa6.81□□□□□ -1.32
UBE2F-204ENST00000409953 NIF3L1Q9GZT8 377 aa6.81□□□□□ -1.32
UBE2F-204ENST00000409953 LHPPQ9H008 270 aa6.81□□□□□ -1.32
UBE2F-204ENST00000409953 APOBEC3GQ9HC16 384 aaKnown RBP6.81□□□□□ -1.32
UBE2F-204ENST00000409953 ATP13A1Q9HD20 1204 aa6.81□□□□□ -1.32
UBE2F-204ENST00000409953 AGPAT3Q9NRZ7 376 aa6.81□□□□□ -1.32
UBE2F-204ENST00000409953 SEPT11Q9NVA2 429 aaKnown RBP6.81□□□□□ -1.32
UBE2F-204ENST00000409953 CHCHD3Q9NX63 227 aaKnown RBP6.81□□□□□ -1.32
UBE2F-204ENST00000409953 PPP4R2Q9NY27 417 aa6.81□□□□□ -1.32
UBE2F-204ENST00000409953 PLA2G3Q9NZ20 509 aa6.81□□□□□ -1.32
UBE2F-204ENST00000409953 CPNE7Q9UBL6 633 aa6.81□□□□□ -1.32
UBE2F-204ENST00000409953 SLC17A4Q9Y2C5 497 aa6.81□□□□□ -1.32
UBE2F-204ENST00000409953 KIR2DS5A0A0G2JLQ3 304 aa6.8□□□□□ -1.32
UBE2F-204ENST00000409953 A0A0G2JNG1 304 aa6.8□□□□□ -1.32
UBE2F-204ENST00000409953 C17orf113A0A1B0GUU1 675 aa6.8□□□□□ -1.32
UBE2F-204ENST00000409953 KLHL33A6NCF5 533 aa6.8□□□□□ -1.32
UBE2F-204ENST00000409953 KIR2DS3K7RE56 304 aa6.8□□□□□ -1.32
UBE2F-204ENST00000409953 PRRG2O14669 202 aa6.8□□□□□ -1.32
UBE2F-204ENST00000409953 SEC16AO15027 2179 aa6.8□□□□□ -1.32
UBE2F-204ENST00000409953 CNOT4O95628 575 aaKnown RBP6.8□□□□□ -1.32
UBE2F-204ENST00000409953 TRUB2O95900 331 aaKnown RBP6.8□□□□□ -1.32
UBE2F-204ENST00000409953 CD160O95971 181 aa6.8□□□□□ -1.32
UBE2F-204ENST00000409953 ELFN1P0C7U0 828 aa6.8□□□□□ -1.32
UBE2F-204ENST00000409953 MX2P20592 715 aa6.8□□□□□ -1.32
UBE2F-204ENST00000409953 CTSCP53634 463 aa6.8□□□□□ -1.32
UBE2F-204ENST00000409953 RAD23BP54727 409 aa6.8□□□□□ -1.32
UBE2F-204ENST00000409953 FOXL2P58012 376 aa6.8□□□□□ -1.32
UBE2F-204ENST00000409953 PPP1CAP62136 330 aa6.8□□□□□ -1.32
UBE2F-204ENST00000409953 CDK3Q00526 305 aa6.8□□□□□ -1.32
UBE2F-204ENST00000409953 ABRQ12979 859 aa6.8□□□□□ -1.32
UBE2F-204ENST00000409953 LRP8Q14114 963 aa6.8□□□□□ -1.32
UBE2F-204ENST00000409953 KIR2DS5Q14953 304 aa6.8□□□□□ -1.32
UBE2F-204ENST00000409953 UGP2Q16851 508 aa6.8□□□□□ -1.32
UBE2F-204ENST00000409953 MIDNQ504T8 468 aa6.8□□□□□ -1.32
UBE2F-204ENST00000409953 SAMD5Q5TGI4 173 aa6.8□□□□□ -1.32
UBE2F-204ENST00000409953 MLIPQ5VWP3 458 aa6.8□□□□□ -1.32
UBE2F-204ENST00000409953 C16orf54Q6UWD8 224 aa6.8□□□□□ -1.32
UBE2F-204ENST00000409953 TMEM26Q6ZUK4 368 aa6.8□□□□□ -1.32
UBE2F-204ENST00000409953 CCDC71Q8IV32 467 aaPredicted RBP6.8□□□□□ -1.32
UBE2F-204ENST00000409953 FNIP1Q8TF40 1166 aa6.8□□□□□ -1.32
UBE2F-204ENST00000409953 FAM149B1Q96BN6 582 aa6.8□□□□□ -1.32
UBE2F-204ENST00000409953 ZMYND19Q96E35 227 aaPredicted RBP6.8□□□□□ -1.32
UBE2F-204ENST00000409953 THOC3Q96J01 351 aaKnown RBP6.8□□□□□ -1.32
UBE2F-204ENST00000409953 HERPUD2Q9BSE4 406 aa6.8□□□□□ -1.32
UBE2F-204ENST00000409953 TEX101Q9BY14 249 aa6.8□□□□□ -1.32
UBE2F-204ENST00000409953 IMPG2Q9BZV3 1241 aa6.8□□□□□ -1.32
UBE2F-204ENST00000409953 SAP130Q9H0E3 1048 aa6.8□□□□□ -1.32
UBE2F-204ENST00000409953 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.8□□□□□ -1.322e-6■■■■□ 21.2
UBE2F-204ENST00000409953 YAE1D1Q9NRH1 226 aa6.8□□□□□ -1.32
UBE2F-204ENST00000409953 FANCLQ9NW38 375 aa6.8□□□□□ -1.32
UBE2F-204ENST00000409953 TBC1D29Q9UFV1 150 aa6.8□□□□□ -1.32
UBE2F-204ENST00000409953 MKL2Q9ULH7 1088 aa6.8□□□□□ -1.32
UBE2F-204ENST00000409953 CBLCQ9ULV8 474 aa6.8□□□□□ -1.32
UBE2F-204ENST00000409953 ABCA1O95477 2261 aa6.8□□□□□ -1.32
UBE2F-204ENST00000409953 SYNJ2BP-COX16A0A087WUM0 186 aa6.79□□□□□ -1.32
UBE2F-204ENST00000409953 A0A1W2PNR3 127 aa6.79□□□□□ -1.32
UBE2F-204ENST00000409953 SNX2O60749 519 aa6.79□□□□□ -1.32
UBE2F-204ENST00000409953 MLYCDO95822 493 aa6.79□□□□□ -1.32
UBE2F-204ENST00000409953 F10P00742 488 aa6.79□□□□□ -1.32
UBE2F-204ENST00000409953 IGLV3-25P01717 112 aa6.79□□□□□ -1.32
UBE2F-204ENST00000409953 HLA-DRAP01903 254 aa6.79□□□□□ -1.32
UBE2F-204ENST00000409953 THBS1P07996 1170 aa6.79□□□□□ -1.32
UBE2F-204ENST00000409953 SETSIPP0DME0 302 aa6.79□□□□□ -1.32
UBE2F-204ENST00000409953 SLC2A3P11169 496 aa6.79□□□□□ -1.32
UBE2F-204ENST00000409953 SLC2A4P14672 509 aa6.79□□□□□ -1.32
UBE2F-204ENST00000409953 GM2AP17900 193 aa6.79□□□□□ -1.32
UBE2F-204ENST00000409953 HOXD13P35453 343 aa6.79□□□□□ -1.32
UBE2F-204ENST00000409953 UBA7P41226 1012 aa6.79□□□□□ -1.32
UBE2F-204ENST00000409953 UBE2IP63279 158 aaKnown RBP6.79□□□□□ -1.32
UBE2F-204ENST00000409953 PITX1P78337 314 aaPredicted RBP6.79□□□□□ -1.32
UBE2F-204ENST00000409953 HSF1Q00613 529 aa6.79□□□□□ -1.32
UBE2F-204ENST00000409953 RAD51Q06609 339 aa6.79□□□□□ -1.32
UBE2F-204ENST00000409953 DBN1Q16643 649 aa6.79□□□□□ -1.32
UBE2F-204ENST00000409953 C5orf22Q49AR2 442 aa6.79□□□□□ -1.32
UBE2F-204ENST00000409953 PYCR3Q53H96 274 aa6.79□□□□□ -1.32
UBE2F-204ENST00000409953 KRTCAP3Q53RY4 240 aa6.79□□□□□ -1.32
UBE2F-204ENST00000409953 MARK2Q7KZI7 788 aaKnown RBP6.79□□□□□ -1.32
UBE2F-204ENST00000409953 SNX32Q86XE0 403 aa6.79□□□□□ -1.32
UBE2F-204ENST00000409953 GALNT13Q8IUC8 556 aa6.79□□□□□ -1.32
UBE2F-204ENST00000409953 PLD6Q8N2A8 252 aaKnown RBP6.79□□□□□ -1.32
UBE2F-204ENST00000409953 NKAIN3Q8N8D7 197 aa6.79□□□□□ -1.32
UBE2F-204ENST00000409953 ANKRD42Q8N9B4 389 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms