RNA–Protein interactions for RNA: ENST00000409886.3

RGPD3-202, Transcript of RANBP2-like and GRIP domain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RGPD3, Length 5,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3-202ENST00000409886 TRAF2Q12933 501 aa3.08□□□□□ -1.92
RGPD3-202ENST00000409886 MTAPQ13126 283 aa3.08□□□□□ -1.92
RGPD3-202ENST00000409886 MELKQ14680 651 aa3.08□□□□□ -1.92
RGPD3-202ENST00000409886 TMEM259Q4ZIN3 620 aa3.08□□□□□ -1.92
RGPD3-202ENST00000409886 ZC3H12BQ5HYM0 836 aaKnown RBP3.08□□□□□ -1.92
RGPD3-202ENST00000409886 DENND5AQ6IQ26 1287 aa3.08□□□□□ -1.92
RGPD3-202ENST00000409886 ARHGAP36Q6ZRI8 547 aa3.08□□□□□ -1.92
RGPD3-202ENST00000409886 BBS12Q6ZW61 710 aa3.08□□□□□ -1.92
RGPD3-202ENST00000409886 SPPL2CQ8IUH8 684 aa3.08□□□□□ -1.92
RGPD3-202ENST00000409886 SLC9A9Q8IVB4 645 aa3.08□□□□□ -1.92
RGPD3-202ENST00000409886 TRIM48Q8IWZ4 208 aa3.08□□□□□ -1.92
RGPD3-202ENST00000409886 SPARTQ8N0X7 666 aa3.08□□□□□ -1.92
RGPD3-202ENST00000409886 SLC34A3Q8N130 599 aa3.08□□□□□ -1.92
RGPD3-202ENST00000409886 STPG2Q8N412 459 aa3.08□□□□□ -1.92
RGPD3-202ENST00000409886 DDI1Q8WTU0 396 aa3.08□□□□□ -1.92
RGPD3-202ENST00000409886 PYROXD1Q8WU10 500 aa3.08□□□□□ -1.92
RGPD3-202ENST00000409886 ELSPBP1Q96BH3 223 aa3.08□□□□□ -1.92
RGPD3-202ENST00000409886 TRIM11Q96F44 468 aa3.08□□□□□ -1.92
RGPD3-202ENST00000409886 MLPHQ9BV36 600 aaPredicted RBP3.08□□□□□ -1.92
RGPD3-202ENST00000409886 DGCR6LQ9BY27 220 aa3.08□□□□□ -1.92
RGPD3-202ENST00000409886 TRIM55Q9BYV6 548 aa3.08□□□□□ -1.92
RGPD3-202ENST00000409886 PARVGQ9HBI0 331 aa3.08□□□□□ -1.92
RGPD3-202ENST00000409886 CYP4F12Q9HCS2 524 aa3.08□□□□□ -1.92
RGPD3-202ENST00000409886 PNMA8BQ9ULN7 279 aaPredicted RBP3.08□□□□□ -1.92
RGPD3-202ENST00000409886 FRMD4BQ9Y2L6 1034 aa3.08□□□□□ -1.92
RGPD3-202ENST00000409886 SSUH2Q9Y2M2 353 aa3.08□□□□□ -1.92
RGPD3-202ENST00000409886 SMIM31A0A1B0GVY4 71 aa3.08□□□□□ -1.92
RGPD3-202ENST00000409886 PABPN1LA6NDY0 278 aaKnown RBP3.08□□□□□ -1.92
RGPD3-202ENST00000409886 SCAMP3O14828 347 aaKnown RBP3.08□□□□□ -1.92
RGPD3-202ENST00000409886 KHNYNO15037 678 aaKnown RBP3.08□□□□□ -1.92
RGPD3-202ENST00000409886 EXTL3O43909 919 aa3.08□□□□□ -1.92
RGPD3-202ENST00000409886 SPAG6O75602 509 aa3.08□□□□□ -1.92
RGPD3-202ENST00000409886 SLC22A3O75751 556 aa3.08□□□□□ -1.92
RGPD3-202ENST00000409886 SRP72O76094 671 aaKnown RBP3.08□□□□□ -1.92
RGPD3-202ENST00000409886 ARIH2O95376 493 aa3.08□□□□□ -1.92
RGPD3-202ENST00000409886 FCER2P06734 321 aa3.08□□□□□ -1.92
RGPD3-202ENST00000409886 HRH2P25021 359 aa3.08□□□□□ -1.92
RGPD3-202ENST00000409886 SSR1P43307 286 aaKnown RBP3.08□□□□□ -1.92
RGPD3-202ENST00000409886 NT5C2P49902 561 aa3.08□□□□□ -1.92
RGPD3-202ENST00000409886 ZNF132P52740 706 aa3.08□□□□□ -1.92
RGPD3-202ENST00000409886 NPTX1Q15818 432 aa3.08□□□□□ -1.92
RGPD3-202ENST00000409886 CNGA3Q16281 694 aa3.08□□□□□ -1.92
RGPD3-202ENST00000409886 DBN1Q16643 649 aa3.08□□□□□ -1.92
RGPD3-202ENST00000409886 HSDL1Q3SXM5 330 aa3.08□□□□□ -1.92
RGPD3-202ENST00000409886 HSP90AA5PQ58FG0 334 aa3.08□□□□□ -1.92
RGPD3-202ENST00000409886 BSPRYQ5W0U4 402 aa3.08□□□□□ -1.92
RGPD3-202ENST00000409886 SLC6A19Q695T7 634 aa3.08□□□□□ -1.92
RGPD3-202ENST00000409886 MCF2L2Q86YR7 1114 aa3.08□□□□□ -1.92
RGPD3-202ENST00000409886 CNIH3Q8TBE1 160 aa3.08□□□□□ -1.92
RGPD3-202ENST00000409886 WASF1Q92558 559 aa3.08□□□□□ -1.92
RGPD3-202ENST00000409886 TMA16Q96EY4 203 aaKnown RBP3.08□□□□□ -1.92
RGPD3-202ENST00000409886 POM121Q96HA1 1249 aa3.08□□□□□ -1.92
RGPD3-202ENST00000409886 TMEM176AQ96HP8 235 aa3.08□□□□□ -1.92
RGPD3-202ENST00000409886 TTYH2Q9BSA4 534 aa3.08□□□□□ -1.92
RGPD3-202ENST00000409886 FAM192AQ9GZU8 254 aa3.08□□□□□ -1.92
RGPD3-202ENST00000409886 ARRDC1-AS1Q9H2J1 176 aa3.08□□□□□ -1.92
RGPD3-202ENST00000409886 LUC7LQ9NQ29 371 aaKnown RBP3.08□□□□□ -1.92
RGPD3-202ENST00000409886 RGS18Q9NS28 235 aa3.08□□□□□ -1.92
RGPD3-202ENST00000409886 HOMER2Q9NSB8 354 aa3.08□□□□□ -1.92
RGPD3-202ENST00000409886 TXLNGQ9NUQ3 528 aa3.08□□□□□ -1.92
RGPD3-202ENST00000409886 MAP3K20Q9NYL2 800 aaKnown RBP3.08□□□□□ -1.92
RGPD3-202ENST00000409886 KLHL3Q9UH77 587 aa3.08□□□□□ -1.92
RGPD3-202ENST00000409886 RUVBL2Q9Y230 463 aaKnown RBP3.08□□□□□ -1.92
RGPD3-202ENST00000409886 ITM2BQ9Y287 266 aa3.08□□□□□ -1.92
RGPD3-202ENST00000409886 RAXQ9Y2V3 346 aa3.08□□□□□ -1.92
RGPD3-202ENST00000409886 GMEB1Q9Y692 573 aa3.08□□□□□ -1.92
RGPD3-202ENST00000409886 PRRC2AP48634 2157 aaKnown RBP3.08□□□□□ -1.92
RGPD3-202ENST00000409886 NOBOXO60393 691 aa3.08□□□□□ -1.92
RGPD3-202ENST00000409886 HLA-DRAP01903 254 aa3.08□□□□□ -1.92
RGPD3-202ENST00000409886 COX4I1P13073 169 aa3.08□□□□□ -1.92
RGPD3-202ENST00000409886 CD19P15391 556 aa3.08□□□□□ -1.92
RGPD3-202ENST00000409886 NCF2P19878 526 aaPredicted RBP3.08□□□□□ -1.92
RGPD3-202ENST00000409886 KDELR1P24390 212 aa3.08□□□□□ -1.92
RGPD3-202ENST00000409886 EIF2S3P41091 472 aaKnown RBP3.08□□□□□ -1.92
RGPD3-202ENST00000409886 SOX3P41225 446 aa3.08□□□□□ -1.92
RGPD3-202ENST00000409886 RGS7P49802 495 aa3.08□□□□□ -1.92
RGPD3-202ENST00000409886 SERPINB8P50452 374 aa3.08□□□□□ -1.92
RGPD3-202ENST00000409886 CLCN4P51793 760 aa3.08□□□□□ -1.92
RGPD3-202ENST00000409886 TAS2R39P59534 338 aa3.08□□□□□ -1.92
RGPD3-202ENST00000409886 ISL1P61371 349 aa3.08□□□□□ -1.92
RGPD3-202ENST00000409886 SNRPNP63162 240 aaKnown RBP3.08□□□□□ -1.92
RGPD3-202ENST00000409886 GTF2BQ00403 316 aa3.08□□□□□ -1.92
RGPD3-202ENST00000409886 CALCOCO2Q13137 446 aa3.08□□□□□ -1.92
RGPD3-202ENST00000409886 DGCR6Q14129 220 aa3.08□□□□□ -1.92
RGPD3-202ENST00000409886 RBMS2Q15434 407 aaKnown RBP3.08□□□□□ -1.92
RGPD3-202ENST00000409886 NFIL3Q16649 462 aa3.08□□□□□ -1.92
RGPD3-202ENST00000409886 PM20D1Q6GTS8 502 aa3.08□□□□□ -1.92
RGPD3-202ENST00000409886 ADNP2Q6IQ32 1131 aa3.08□□□□□ -1.92
RGPD3-202ENST00000409886 BORAQ6PGQ7 559 aa3.08□□□□□ -1.92
RGPD3-202ENST00000409886 PADI6Q6TGC4 694 aa3.08□□□□□ -1.92
RGPD3-202ENST00000409886 TMIGD1Q6UXZ0 262 aa3.08□□□□□ -1.92
RGPD3-202ENST00000409886 R3HCC1LQ7Z5L2 792 aaKnown RBP3.08□□□□□ -1.92
RGPD3-202ENST00000409886 FBXO16Q8IX29 292 aaPredicted RBP3.08□□□□□ -1.92
RGPD3-202ENST00000409886 FBXW8Q8N3Y1 598 aa3.08□□□□□ -1.92
RGPD3-202ENST00000409886 UBA3Q8TBC4 463 aa3.08□□□□□ -1.92
RGPD3-202ENST00000409886 SLC25A28Q96A46 364 aa3.08□□□□□ -1.92
RGPD3-202ENST00000409886 GMCL1Q96IK5 515 aa3.08□□□□□ -1.92
RGPD3-202ENST00000409886 PSMG3-AS1Q96PY0 264 aa3.08□□□□□ -1.92
RGPD3-202ENST00000409886 PPP1R16BQ96T49 567 aa3.08□□□□□ -1.92
RGPD3-202ENST00000409886 OLFM1Q99784 485 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms