RNA–Protein interactions for RNA: ENST00000409836.3

GYPC-203, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GYPC, Length 932 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-203ENST00000409836 IGHV1OR21-1A0A087WYE8 117 aa13.72□□□□□ -0.21
GYPC-203ENST00000409836 EFCAB8A8MWE9 144 aa13.72□□□□□ -0.21
GYPC-203ENST00000409836 PRMT5O14744 637 aaPredicted RBP13.72□□□□□ -0.21
GYPC-203ENST00000409836 LIN7AO14910 233 aaPredicted RBP13.72□□□□□ -0.21
GYPC-203ENST00000409836 ZW10O43264 779 aa13.72□□□□□ -0.21
GYPC-203ENST00000409836 VAPBO95292 243 aa13.72□□□□□ -0.21
GYPC-203ENST00000409836 FTH1P02794 183 aa13.72□□□□□ -0.21
GYPC-203ENST00000409836 CAPNS1P04632 268 aa13.72□□□□□ -0.21
GYPC-203ENST00000409836 CD151P48509 253 aa13.72□□□□□ -0.21
GYPC-203ENST00000409836 ITGA8P53708 1063 aa13.72□□□□□ -0.21
GYPC-203ENST00000409836 DRG2P55039 364 aaKnown RBP13.72□□□□□ -0.21
GYPC-203ENST00000409836 CRYMQ14894 314 aa13.72□□□□□ -0.21
GYPC-203ENST00000409836 HIF1AQ16665 826 aa13.72□□□□□ -0.21
GYPC-203ENST00000409836 ISXQ2M1V0 245 aa13.72□□□□□ -0.21
GYPC-203ENST00000409836 MSS51Q4VC12 460 aa13.72□□□□□ -0.21
GYPC-203ENST00000409836 CAPRIN2Q6IMN6 1127 aaKnown RBP13.72□□□□□ -0.21
GYPC-203ENST00000409836 MRNIPQ6NTE8 343 aa13.72□□□□□ -0.21
GYPC-203ENST00000409836 RBM44Q6ZP01 1051 aaKnown RBP13.72□□□□□ -0.21
GYPC-203ENST00000409836 DET1Q7L5Y6 550 aa13.72□□□□□ -0.21
GYPC-203ENST00000409836 TAS2R42Q7RTR8 314 aa13.72□□□□□ -0.21
GYPC-203ENST00000409836 GALNT7Q86SF2 657 aa13.72□□□□□ -0.21
GYPC-203ENST00000409836 SLC9B2Q86UD5 537 aa13.72□□□□□ -0.21
GYPC-203ENST00000409836 CILP2Q8IUL8 1156 aa13.72□□□□□ -0.21
GYPC-203ENST00000409836 SLITRK4Q8IW52 837 aa13.72□□□□□ -0.21
GYPC-203ENST00000409836 CNTN4Q8IWV2 1026 aa13.72□□□□□ -0.21
GYPC-203ENST00000409836 PDIK1LQ8N165 341 aa13.72□□□□□ -0.21
GYPC-203ENST00000409836 CLDN19Q8N6F1 224 aa13.72□□□□□ -0.21
GYPC-203ENST00000409836 ZFPM2Q8WW38 1151 aa13.72□□□□□ -0.21
GYPC-203ENST00000409836 LPGAT1Q92604 370 aa13.72□□□□□ -0.21
GYPC-203ENST00000409836 LIN37Q96GY3 246 aaPredicted RBP13.72□□□□□ -0.21
GYPC-203ENST00000409836 EBNA1BP2Q99848 306 aaKnown RBP13.72□□□□□ -0.21
GYPC-203ENST00000409836 DPYSL5Q9BPU6 564 aa13.72□□□□□ -0.21
GYPC-203ENST00000409836 CCM2Q9BSQ5 444 aa13.72□□□□□ -0.21
GYPC-203ENST00000409836 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.72□□□□□ -0.21
GYPC-203ENST00000409836 OR52A5Q9H2C5 316 aa13.72□□□□□ -0.21
GYPC-203ENST00000409836 LRRN3Q9H3W5 708 aa13.72□□□□□ -0.21
GYPC-203ENST00000409836 OSGEPL1Q9H4B0 414 aa13.72□□□□□ -0.21
GYPC-203ENST00000409836 STN1Q9H668 368 aaKnown RBP13.72□□□□□ -0.21
GYPC-203ENST00000409836 COG4Q9H9E3 785 aa13.72□□□□□ -0.21
GYPC-203ENST00000409836 SLC40A1Q9NP59 571 aa13.72□□□□□ -0.21
GYPC-203ENST00000409836 GRHL1Q9NZI5 618 aa13.72□□□□□ -0.21
GYPC-203ENST00000409836 WDR37Q9Y2I8 494 aa13.72□□□□□ -0.21
GYPC-203ENST00000409836 TEX264Q9Y6I9 313 aa13.72□□□□□ -0.21
GYPC-203ENST00000409836 RPS6KL1Q9Y6S9 549 aa13.72□□□□□ -0.21
GYPC-203ENST00000409836 FAM169AQ9Y6X4 670 aa13.72□□□□□ -0.21
GYPC-203ENST00000409836 ANKRD11Q6UB99 2663 aaPredicted RBP13.71□□□□□ -0.21
GYPC-203ENST00000409836 MN1Q10571 1320 aaPredicted RBP13.71□□□□□ -0.21
GYPC-203ENST00000409836 RHPN2P1A8MT19 583 aa13.71□□□□□ -0.21
GYPC-203ENST00000409836 PDZK1P1A8MUH7 402 aa13.71□□□□□ -0.21
GYPC-203ENST00000409836 B4GAT1O43505 415 aa13.71□□□□□ -0.21
GYPC-203ENST00000409836 OR1I1O60431 355 aa13.71□□□□□ -0.21
GYPC-203ENST00000409836 CPNE6O95741 557 aa13.71□□□□□ -0.21
GYPC-203ENST00000409836 MT-CO3P00414 261 aa13.71□□□□□ -0.21
GYPC-203ENST00000409836 RPLP0P05388 317 aaKnown RBP13.71□□□□□ -0.21
GYPC-203ENST00000409836 POLBP06746 335 aa13.71□□□□□ -0.21
GYPC-203ENST00000409836 MTHFD1P11586 935 aaKnown RBP13.71□□□□□ -0.21
GYPC-203ENST00000409836 SLC19A1P41440 591 aa13.71□□□□□ -0.21
GYPC-203ENST00000409836 PLOD1Q02809 727 aaPredicted RBP13.71□□□□□ -0.21
GYPC-203ENST00000409836 ZFP36L1Q07352 338 aaKnown RBP13.71□□□□□ -0.21
GYPC-203ENST00000409836 DHX9Q08211 1270 aaKnown RBP13.71□□□□□ -0.21
GYPC-203ENST00000409836 SPIDRQ14159 915 aa13.71□□□□□ -0.21
GYPC-203ENST00000409836 CLCA4Q14CN2 919 aa13.71□□□□□ -0.21
GYPC-203ENST00000409836 RTP5Q14D33 572 aa13.71□□□□□ -0.21
GYPC-203ENST00000409836 LONRF1Q17RB8 773 aa13.71□□□□□ -0.21
GYPC-203ENST00000409836 CASC4Q6P4E1 433 aa13.71□□□□□ -0.21
GYPC-203ENST00000409836 KIF18AQ8NI77 898 aa13.71□□□□□ -0.21
GYPC-203ENST00000409836 ZNF669Q96BR6 464 aaPredicted RBP13.71□□□□□ -0.21
GYPC-203ENST00000409836 RMDN2Q96LZ7 410 aa13.71□□□□□ -0.21
GYPC-203ENST00000409836 BIRC8Q96P09 236 aa13.71□□□□□ -0.21
GYPC-203ENST00000409836 TRIM56Q9BRZ2 755 aaKnown RBP13.71□□□□□ -0.21
GYPC-203ENST00000409836 CARD6Q9BX69 1037 aa13.71□□□□□ -0.21
GYPC-203ENST00000409836 NRSN2Q9GZP1 204 aa13.71□□□□□ -0.21
GYPC-203ENST00000409836 TWSG1Q9GZX9 223 aa13.71□□□□□ -0.21
GYPC-203ENST00000409836 RAB17Q9H0T7 212 aa13.71□□□□□ -0.21
GYPC-203ENST00000409836 EPB41L5Q9HCM4 733 aa13.71□□□□□ -0.21
GYPC-203ENST00000409836 INTS10Q9NVR2 710 aaKnown RBP13.71□□□□□ -0.21
GYPC-203ENST00000409836 PDP2Q9P2J9 529 aa13.71□□□□□ -0.21
GYPC-203ENST00000409836 VPS9D1Q9Y2B5 631 aa13.71□□□□□ -0.21
GYPC-203ENST00000409836 DNAJC16Q9Y2G8 782 aa13.71□□□□□ -0.21
GYPC-203ENST00000409836 PRSS21Q9Y6M0 314 aa13.71□□□□□ -0.21
GYPC-203ENST00000409836 SLC5A10A0PJK1 596 aa13.7□□□□□ -0.22
GYPC-203ENST00000409836 TMEM8BA6NDV4 472 aa13.7□□□□□ -0.22
GYPC-203ENST00000409836 EIF3HO15372 352 aaKnown RBP eCLIP13.7□□□□□ -0.22
GYPC-203ENST00000409836 DXOO77932 396 aaKnown RBP13.7□□□□□ -0.22
GYPC-203ENST00000409836 URI1O94763 535 aaPredicted RBP13.7□□□□□ -0.22
GYPC-203ENST00000409836 ESR1P03372 595 aa13.7□□□□□ -0.22
GYPC-203ENST00000409836 SLC35G4P0C7Q5 338 aa13.7□□□□□ -0.22
GYPC-203ENST00000409836 OR56A5P0C7T3 313 aa13.7□□□□□ -0.22
GYPC-203ENST00000409836 CD1CP29017 333 aa13.7□□□□□ -0.22
GYPC-203ENST00000409836 CSF2RBP32927 897 aa13.7□□□□□ -0.22
GYPC-203ENST00000409836 HALP42357 657 aa13.7□□□□□ -0.22
GYPC-203ENST00000409836 MLLT3P42568 568 aaPredicted RBP13.7□□□□□ -0.22
GYPC-203ENST00000409836 ARL4CP56559 192 aa13.7□□□□□ -0.22
GYPC-203ENST00000409836 CCL7P80098 99 aa13.7□□□□□ -0.22
GYPC-203ENST00000409836 GBX1Q14549 363 aa13.7□□□□□ -0.22
GYPC-203ENST00000409836 RPE65Q16518 533 aa13.7□□□□□ -0.22
GYPC-203ENST00000409836 SPANXN3Q5MJ09 141 aa13.7□□□□□ -0.22
GYPC-203ENST00000409836 NEPROQ6NW34 567 aa13.7□□□□□ -0.22
GYPC-203ENST00000409836 WDR74Q6RFH5 385 aaPredicted RBP13.7□□□□□ -0.22
GYPC-203ENST00000409836 CES3Q6UWW8 571 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms