RNA–Protein interactions for RNA: ENST00000409627.6

SUMO1-208, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 3

Gene SUMO1, Length 722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-208ENST00000409627 TPP1O14773 563 aa16.32■□□□□ 0.2
SUMO1-208ENST00000409627 LIN7AO14910 233 aaPredicted RBP16.32■□□□□ 0.2
SUMO1-208ENST00000409627 KPNA5O15131 536 aa16.32■□□□□ 0.2
SUMO1-208ENST00000409627 TRIM16O95361 564 aa16.32■□□□□ 0.2
SUMO1-208ENST00000409627 ANXA6P08133 673 aa16.32■□□□□ 0.2
SUMO1-208ENST00000409627 GIMD1P0DJR0 217 aa16.32■□□□□ 0.2
SUMO1-208ENST00000409627 CD9P21926 228 aa16.32■□□□□ 0.2
SUMO1-208ENST00000409627 SPRP35270 261 aaPredicted RBP16.32■□□□□ 0.2
SUMO1-208ENST00000409627 ABCG1P45844 678 aa16.32■□□□□ 0.2
SUMO1-208ENST00000409627 LIMK2P53671 638 aa16.32■□□□□ 0.2
SUMO1-208ENST00000409627 NFE2L1Q14494 772 aa16.32■□□□□ 0.2
SUMO1-208ENST00000409627 SUZ12Q15022 739 aaKnown RBP16.32■□□□□ 0.2
SUMO1-208ENST00000409627 TCEA2Q15560 299 aa16.32■□□□□ 0.2
SUMO1-208ENST00000409627 RBM20Q5T481 1227 aaKnown RBP16.32■□□□□ 0.2
SUMO1-208ENST00000409627 FAM45BPQ6NSW5 357 aa16.32■□□□□ 0.2
SUMO1-208ENST00000409627 SLC30A9Q6PML9 568 aa16.32■□□□□ 0.2
SUMO1-208ENST00000409627 XKR5Q6UX68 686 aa16.32■□□□□ 0.2
SUMO1-208ENST00000409627 FAM83HQ6ZRV2 1179 aaPredicted RBP16.32■□□□□ 0.2
SUMO1-208ENST00000409627 GATAD2AQ86YP4 633 aa16.32■□□□□ 0.2
SUMO1-208ENST00000409627 FAM45AQ8TCE6 357 aa16.32■□□□□ 0.2
SUMO1-208ENST00000409627 SLC44A1Q8WWI5 657 aa16.32■□□□□ 0.2
SUMO1-208ENST00000409627 ELMO1Q92556 727 aa16.32■□□□□ 0.2
SUMO1-208ENST00000409627 VPS39Q96JC1 886 aa16.32■□□□□ 0.2
SUMO1-208ENST00000409627 PAFAH2Q99487 392 aa16.32■□□□□ 0.2
SUMO1-208ENST00000409627 NDNQ99608 321 aa16.32■□□□□ 0.2
SUMO1-208ENST00000409627 OSGEPL1Q9H4B0 414 aa16.32■□□□□ 0.2
SUMO1-208ENST00000409627 COG4Q9H9E3 785 aa16.32■□□□□ 0.2
SUMO1-208ENST00000409627 LATS2Q9NRM7 1088 aa16.32■□□□□ 0.2
SUMO1-208ENST00000409627 SPATS2LQ9NUQ6 558 aaKnown RBP16.32■□□□□ 0.2
SUMO1-208ENST00000409627 TAAR2Q9P1P5 351 aa16.32■□□□□ 0.2
SUMO1-208ENST00000409627 DOLKQ9UPQ8 538 aa16.32■□□□□ 0.2
SUMO1-208ENST00000409627 DNAJC16Q9Y2G8 782 aa16.32■□□□□ 0.2
SUMO1-208ENST00000409627 MED16Q9Y2X0 877 aa16.32■□□□□ 0.2
SUMO1-208ENST00000409627 COL5A1P20908 1838 aaPredicted RBP16.31■□□□□ 0.2
SUMO1-208ENST00000409627 FAM95CA0A1B0GW59 222 aa16.31■□□□□ 0.2
SUMO1-208ENST00000409627 E5RI56 91 aa16.31■□□□□ 0.2
SUMO1-208ENST00000409627 YY2O15391 372 aa16.31■□□□□ 0.2
SUMO1-208ENST00000409627 VPS26AO75436 327 aa16.31■□□□□ 0.2
SUMO1-208ENST00000409627 NUDT17P0C025 328 aa16.31■□□□□ 0.2
SUMO1-208ENST00000409627 ITGB6P18564 788 aa16.31■□□□□ 0.2
SUMO1-208ENST00000409627 CHRM3P20309 590 aa16.31■□□□□ 0.2
SUMO1-208ENST00000409627 IDSP22304 550 aa16.31■□□□□ 0.2
SUMO1-208ENST00000409627 AOAHP28039 575 aa16.31■□□□□ 0.2
SUMO1-208ENST00000409627 CCR7P32248 378 aa16.31■□□□□ 0.2
SUMO1-208ENST00000409627 PLOD1Q02809 727 aaPredicted RBP16.31■□□□□ 0.2
SUMO1-208ENST00000409627 RPA4Q13156 261 aa16.31■□□□□ 0.2
SUMO1-208ENST00000409627 INAVAQ3KP66 663 aa16.31■□□□□ 0.2
SUMO1-208ENST00000409627 HECTD2Q5U5R9 776 aa16.31■□□□□ 0.2
SUMO1-208ENST00000409627 METRNLQ641Q3 311 aa16.31■□□□□ 0.2
SUMO1-208ENST00000409627 DBX2Q6ZNG2 339 aa16.31■□□□□ 0.2
SUMO1-208ENST00000409627 GPATCH11Q8N954 259 aa16.31■□□□□ 0.2
SUMO1-208ENST00000409627 HNRNPLLQ8WVV9 542 aaKnown RBP16.31■□□□□ 0.2
SUMO1-208ENST00000409627 ATXN7L3BQ96GX2 97 aa16.31■□□□□ 0.2
SUMO1-208ENST00000409627 GPR22Q99680 433 aa16.31■□□□□ 0.2
SUMO1-208ENST00000409627 CCDC77Q9BR77 488 aa16.31■□□□□ 0.2
SUMO1-208ENST00000409627 DHRS4Q9BTZ2 278 aa16.31■□□□□ 0.2
SUMO1-208ENST00000409627 DUSP23Q9BVJ7 150 aa16.31■□□□□ 0.2
SUMO1-208ENST00000409627 TAS2R13Q9NYV9 303 aa16.31■□□□□ 0.2
SUMO1-208ENST00000409627 NLGN3Q9NZ94 848 aa16.31■□□□□ 0.2
SUMO1-208ENST00000409627 KLHL42Q9P2K6 505 aa16.31■□□□□ 0.2
SUMO1-208ENST00000409627 ZNF180Q9UJW8 692 aa16.31■□□□□ 0.2
SUMO1-208ENST00000409627 PCOLCE2Q9UKZ9 415 aa16.31■□□□□ 0.2
SUMO1-208ENST00000409627 ACSL5Q9ULC5 683 aa16.31■□□□□ 0.2
SUMO1-208ENST00000409627 ARHGEF17Q96PE2 2063 aaPredicted RBP16.3■□□□□ 0.2
SUMO1-208ENST00000409627 SLC5A10A0PJK1 596 aa16.3■□□□□ 0.2
SUMO1-208ENST00000409627 A6NCN8 305 aa16.3■□□□□ 0.2
SUMO1-208ENST00000409627 POC1B-GALNT4F8VUJ3 575 aa16.3■□□□□ 0.2
SUMO1-208ENST00000409627 FLRT2O43155 660 aa16.3■□□□□ 0.2
SUMO1-208ENST00000409627 FAM155BO75949 473 aa16.3■□□□□ 0.2
SUMO1-208ENST00000409627 APOA4P06727 396 aa16.3■□□□□ 0.2
SUMO1-208ENST00000409627 INHBAP08476 426 aa16.3■□□□□ 0.2
SUMO1-208ENST00000409627 ALPPL2P10696 532 aa16.3■□□□□ 0.2
SUMO1-208ENST00000409627 FDXRP22570 491 aa16.3■□□□□ 0.2
SUMO1-208ENST00000409627 MSH2P43246 934 aa16.3■□□□□ 0.2
SUMO1-208ENST00000409627 CLCN7P51798 805 aa16.3■□□□□ 0.2
SUMO1-208ENST00000409627 BOP1Q14137 746 aaKnown RBP16.3■□□□□ 0.2
SUMO1-208ENST00000409627 TMED2Q15363 201 aa16.3■□□□□ 0.2
SUMO1-208ENST00000409627 DEFB133Q30KQ1 61 aa16.3■□□□□ 0.2
SUMO1-208ENST00000409627 SYTL3Q4VX76 610 aa16.3■□□□□ 0.2
SUMO1-208ENST00000409627 PLEKHS1Q5SXH7 462 aa16.3■□□□□ 0.2
SUMO1-208ENST00000409627 C6orf132Q5T0Z8 1188 aa16.3■□□□□ 0.2
SUMO1-208ENST00000409627 AGAP9Q5VTM2 703 aa16.3■□□□□ 0.2
SUMO1-208ENST00000409627 UGT3A1Q6NUS8 523 aa16.3■□□□□ 0.2
SUMO1-208ENST00000409627 WASH2PQ6VEQ5 465 aa16.3■□□□□ 0.2
SUMO1-208ENST00000409627 OTOAQ7RTW8 1153 aa16.3■□□□□ 0.2
SUMO1-208ENST00000409627 CFAP206Q8IYR0 622 aa16.3■□□□□ 0.2
SUMO1-208ENST00000409627 OR4C6Q8NH72 309 aa16.3■□□□□ 0.2
SUMO1-208ENST00000409627 ASZ1Q8WWH4 475 aa16.3■□□□□ 0.2
SUMO1-208ENST00000409627 ELMO2Q96JJ3 720 aa16.3■□□□□ 0.2
SUMO1-208ENST00000409627 PPCSQ9HAB8 311 aa16.3■□□□□ 0.2
SUMO1-208ENST00000409627 WASH6PQ9NQA3 447 aa16.3■□□□□ 0.2
SUMO1-208ENST00000409627 TBC1D29Q9UFV1 150 aa16.3■□□□□ 0.2
SUMO1-208ENST00000409627 VWA7Q9Y334 891 aa16.3■□□□□ 0.2
SUMO1-208ENST00000409627 IKBKGQ9Y6K9 419 aa16.3■□□□□ 0.2
SUMO1-208ENST00000409627 CABIN1Q9Y6J0 2220 aa16.3■□□□□ 0.2
SUMO1-208ENST00000409627 FRYLO94915 3013 aa16.29■□□□□ 0.2
SUMO1-208ENST00000409627 LAMA1P25391 3075 aa16.29■□□□□ 0.2
SUMO1-208ENST00000409627 FFAR2O15552 330 aa16.29■□□□□ 0.2
SUMO1-208ENST00000409627 GDF9O60383 454 aa16.29■□□□□ 0.2
SUMO1-208ENST00000409627 GPC4O75487 556 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms