RNA–Protein interactions for RNA: ENST00000409214.5

GTDC1-206, Transcript of glycosyltransferase like domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTDC1, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTDC1-206ENST00000409214 DUSP15Q9H1R2 295 aaPredicted RBP4.3□□□□□ -1.72
GTDC1-206ENST00000409214 BARX1Q9HBU1 254 aaPredicted RBP4.3□□□□□ -1.72
GTDC1-206ENST00000409214 TRPC7Q9HCX4 862 aa4.3□□□□□ -1.72
GTDC1-206ENST00000409214 PIGVQ9NUD9 493 aa4.3□□□□□ -1.72
GTDC1-206ENST00000409214 KCMF1Q9P0J7 381 aa4.3□□□□□ -1.72
GTDC1-206ENST00000409214 FZD10Q9ULW2 581 aa4.3□□□□□ -1.72
GTDC1-206ENST00000409214 CTNND2Q9UQB3 1225 aa4.3□□□□□ -1.72
GTDC1-206ENST00000409214 DTX4Q9Y2E6 619 aa4.3□□□□□ -1.72
GTDC1-206ENST00000409214 GMEB1Q9Y692 573 aa4.3□□□□□ -1.72
GTDC1-206ENST00000409214 U3KQV3 271 aa4.3□□□□□ -1.72
GTDC1-206ENST00000409214 SALL1Q9NSC2 1324 aa4.3□□□□□ -1.72
GTDC1-206ENST00000409214 PIK3C2AO00443 1686 aa4.3□□□□□ -1.72
GTDC1-206ENST00000409214 XRN1Q8IZH2 1706 aaKnown RBP4.3□□□□□ -1.72
GTDC1-206ENST00000409214 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.29□□□□□ -1.72
GTDC1-206ENST00000409214 A0A1B0GTQ1 180 aa4.29□□□□□ -1.72
GTDC1-206ENST00000409214 SAC3D1A6NKF1 404 aa4.29□□□□□ -1.72
GTDC1-206ENST00000409214 TLX3O43711 291 aaPredicted RBP4.29□□□□□ -1.72
GTDC1-206ENST00000409214 EXTL3O43909 919 aa4.29□□□□□ -1.72
GTDC1-206ENST00000409214 KLK8O60259 260 aa4.29□□□□□ -1.72
GTDC1-206ENST00000409214 GFRA3O60609 400 aa4.29□□□□□ -1.72
GTDC1-206ENST00000409214 N4BP1O75113 896 aaKnown RBP4.29□□□□□ -1.72
GTDC1-206ENST00000409214 TGM6O95932 706 aa4.29□□□□□ -1.72
GTDC1-206ENST00000409214 OTCP00480 354 aa4.29□□□□□ -1.72
GTDC1-206ENST00000409214 UBTFL6P0CB48 400 aaPredicted RBP4.29□□□□□ -1.72
GTDC1-206ENST00000409214 RPA2P15927 270 aa4.29□□□□□ -1.72
GTDC1-206ENST00000409214 HOXA13P31271 388 aaPredicted RBP4.29□□□□□ -1.72
GTDC1-206ENST00000409214 CASP14P31944 242 aa4.29□□□□□ -1.72
GTDC1-206ENST00000409214 PPP1R2P41236 205 aa4.29□□□□□ -1.72
GTDC1-206ENST00000409214 POU3F4P49335 361 aa4.29□□□□□ -1.72
GTDC1-206ENST00000409214 MVDP53602 400 aa4.29□□□□□ -1.72
GTDC1-206ENST00000409214 SNU13P55769 128 aaKnown RBP4.29□□□□□ -1.72
GTDC1-206ENST00000409214 RPL15P61313 204 aaKnown RBP4.29□□□□□ -1.72
GTDC1-206ENST00000409214 CAP1Q01518 475 aa4.29□□□□□ -1.72
GTDC1-206ENST00000409214 SPIBQ01892 262 aa4.29□□□□□ -1.72
GTDC1-206ENST00000409214 ITGB3BPQ13352 177 aaPredicted RBP4.29□□□□□ -1.72
GTDC1-206ENST00000409214 FGFBP1Q14512 234 aa4.29□□□□□ -1.72
GTDC1-206ENST00000409214 AANATQ16613 207 aa4.29□□□□□ -1.72
GTDC1-206ENST00000409214 KLHL26Q53HC5 615 aa4.29□□□□□ -1.72
GTDC1-206ENST00000409214 PPP1R2P3Q6NXS1 205 aa4.29□□□□□ -1.72
GTDC1-206ENST00000409214 TRIM65Q6PJ69 517 aa4.29□□□□□ -1.72
GTDC1-206ENST00000409214 EFL1Q7Z2Z2 1120 aaKnown RBP4.29□□□□□ -1.72
GTDC1-206ENST00000409214 ADIPOR2Q86V24 386 aa4.29□□□□□ -1.72
GTDC1-206ENST00000409214 CEP57Q86XR8 500 aa4.29□□□□□ -1.72
GTDC1-206ENST00000409214 PLXDC1Q8IUK5 500 aa4.29□□□□□ -1.72
GTDC1-206ENST00000409214 NELFCDQ8IXH7 590 aa4.29□□□□□ -1.72
GTDC1-206ENST00000409214 EFCAB13Q8IY85 973 aa4.29□□□□□ -1.72
GTDC1-206ENST00000409214 SLC22A8Q8TCC7 542 aa4.29□□□□□ -1.72
GTDC1-206ENST00000409214 IGDCC4Q8TDY8 1250 aa4.29□□□□□ -1.72
GTDC1-206ENST00000409214 WFDC12Q8WWY7 111 aa4.29□□□□□ -1.72
GTDC1-206ENST00000409214 PRR11Q96HE9 360 aaPredicted RBP4.29□□□□□ -1.72
GTDC1-206ENST00000409214 HIST1H2AHQ96KK5 128 aa4.29□□□□□ -1.72
GTDC1-206ENST00000409214 NSMCE2Q96MF7 247 aa4.29□□□□□ -1.72
GTDC1-206ENST00000409214 MDFIQ99750 246 aa4.29□□□□□ -1.72
GTDC1-206ENST00000409214 HIST1H2AJQ99878 128 aa4.29□□□□□ -1.72
GTDC1-206ENST00000409214 RNF208Q9H0X6 261 aa4.29□□□□□ -1.72
GTDC1-206ENST00000409214 ASCC2Q9H1I8 757 aaPredicted RBP4.29□□□□□ -1.72
GTDC1-206ENST00000409214 CALHM2Q9HA72 323 aa4.29□□□□□ -1.72
GTDC1-206ENST00000409214 KIF9Q9HAQ2 790 aa4.29□□□□□ -1.72
GTDC1-206ENST00000409214 YAE1D1Q9NRH1 226 aa4.29□□□□□ -1.72
GTDC1-206ENST00000409214 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.29□□□□□ -1.72
GTDC1-206ENST00000409214 VSX1Q9NZR4 365 aaPredicted RBP4.29□□□□□ -1.72
GTDC1-206ENST00000409214 LMCD1Q9NZU5 365 aa4.29□□□□□ -1.72
GTDC1-206ENST00000409214 VPS18Q9P253 973 aa4.29□□□□□ -1.72
GTDC1-206ENST00000409214 ABI3Q9P2A4 366 aa4.29□□□□□ -1.72
GTDC1-206ENST00000409214 IMPACTQ9P2X3 320 aa4.29□□□□□ -1.72
GTDC1-206ENST00000409214 TRIM10Q9UDY6 481 aa4.29□□□□□ -1.72
GTDC1-206ENST00000409214 GUCA1BQ9UMX6 200 aa4.29□□□□□ -1.72
GTDC1-206ENST00000409214 NIP7Q9Y221 180 aaKnown RBP eCLIP4.29□□□□□ -1.72
GTDC1-206ENST00000409214 ZMYM6O95789 1325 aa4.29□□□□□ -1.72
GTDC1-206ENST00000409214 MEGF6O75095 1541 aa4.29□□□□□ -1.72
GTDC1-206ENST00000409214 HEG1Q9ULI3 1381 aa4.29□□□□□ -1.72
GTDC1-206ENST00000409214 E7ENQ6 273 aa4.29□□□□□ -1.72
GTDC1-206ENST00000409214 K7EQM0 130 aa4.29□□□□□ -1.72
GTDC1-206ENST00000409214 FOXE1O00358 373 aaPredicted RBP4.29□□□□□ -1.72
GTDC1-206ENST00000409214 CAPN5O15484 640 aaPredicted RBP4.29□□□□□ -1.72
GTDC1-206ENST00000409214 DFNA5O60443 496 aa4.29□□□□□ -1.72
GTDC1-206ENST00000409214 TOMM70O94826 608 aa4.29□□□□□ -1.72
GTDC1-206ENST00000409214 PLEKHA8P1O95397 391 aa4.29□□□□□ -1.72
GTDC1-206ENST00000409214 RLN1P04808 185 aa4.29□□□□□ -1.72
GTDC1-206ENST00000409214 ACAA1P09110 424 aaPredicted RBP4.29□□□□□ -1.72
GTDC1-206ENST00000409214 CLTAP09496 248 aa4.29□□□□□ -1.72
GTDC1-206ENST00000409214 UMPSP11172 480 aa4.29□□□□□ -1.72
GTDC1-206ENST00000409214 RALBP11234 206 aa4.29□□□□□ -1.72
GTDC1-206ENST00000409214 CYP4B1P13584 511 aa4.29□□□□□ -1.72
GTDC1-206ENST00000409214 MMP8P22894 467 aa4.29□□□□□ -1.72
GTDC1-206ENST00000409214 LCN1P31025 176 aa4.29□□□□□ -1.72
GTDC1-206ENST00000409214 LEPRP48357 1165 aaKnown RBP4.29□□□□□ -1.72
GTDC1-206ENST00000409214 ZNF134P52741 427 aa4.29□□□□□ -1.72
GTDC1-206ENST00000409214 CRYBB1P53674 252 aaPredicted RBP4.29□□□□□ -1.72
GTDC1-206ENST00000409214 FOXL2P58012 376 aa4.29□□□□□ -1.72
GTDC1-206ENST00000409214 LILRA4P59901 499 aa4.29□□□□□ -1.72
GTDC1-206ENST00000409214 RPP38P78345 283 aaKnown RBP4.29□□□□□ -1.72
GTDC1-206ENST00000409214 CSHL1Q14406 222 aa4.29□□□□□ -1.72
GTDC1-206ENST00000409214 ALKBH6Q3KRA9 238 aa4.29□□□□□ -1.72
GTDC1-206ENST00000409214 LRIF1Q5T3J3 769 aa4.29□□□□□ -1.72
GTDC1-206ENST00000409214 RESP18Q5W5W9 173 aa4.29□□□□□ -1.72
GTDC1-206ENST00000409214 SPECC1LQ69YQ0 1117 aa4.29□□□□□ -1.72
GTDC1-206ENST00000409214 ERICH5Q6P6B1 374 aa4.29□□□□□ -1.72
GTDC1-206ENST00000409214 PSRC1Q6PGN9 363 aaPredicted RBP4.29□□□□□ -1.72
GTDC1-206ENST00000409214 ZNF852Q6ZMS4 543 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms