RNA–Protein interactions for RNA: ENST00000409025.5

USP39-202, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5 BASIC

Gene USP39, Length 1,946 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-202ENST00000409025 FBXL19Q6PCT2 694 aa18.65■□□□□ 0.58
USP39-202ENST00000409025 NET1Q7Z628 596 aaPredicted RBP18.65■□□□□ 0.58
USP39-202ENST00000409025 DDHD1Q8NEL9 900 aa18.65■□□□□ 0.58
USP39-202ENST00000409025 PPP1R16AQ96I34 528 aa18.65■□□□□ 0.58
USP39-202ENST00000409025 CLPTM1LQ96KA5 538 aa18.65■□□□□ 0.58
USP39-202ENST00000409025 PLA2G2FQ9BZM2 168 aa18.65■□□□□ 0.58
USP39-202ENST00000409025 TMEM245Q9H330 911 aa18.65■□□□□ 0.58
USP39-202ENST00000409025 AKTIPQ9H8T0 292 aa18.65■□□□□ 0.58
USP39-202ENST00000409025 RDH14Q9HBH5 336 aa18.65■□□□□ 0.58
USP39-202ENST00000409025 CD248Q9HCU0 757 aa18.65■□□□□ 0.58
USP39-202ENST00000409025 PFDN4Q9NQP4 134 aa18.65■□□□□ 0.58
USP39-202ENST00000409025 PTBP2Q9UKA9 531 aaKnown RBP18.65■□□□□ 0.58
USP39-202ENST00000409025 A0A088AWK7 358 aa18.64■□□□□ 0.58
USP39-202ENST00000409025 AIM2O14862 343 aa18.64■□□□□ 0.58
USP39-202ENST00000409025 KPNA5O15131 536 aa18.64■□□□□ 0.58
USP39-202ENST00000409025 ATP4BP51164 291 aa18.64■□□□□ 0.58
USP39-202ENST00000409025 ELP6Q0PNE2 266 aa18.64■□□□□ 0.58
USP39-202ENST00000409025 MAPRE2Q15555 327 aa18.64■□□□□ 0.58
USP39-202ENST00000409025 SULT1C3Q6IMI6 304 aa18.64■□□□□ 0.58
USP39-202ENST00000409025 SFTPA1Q8IWL2 248 aa18.64■□□□□ 0.58
USP39-202ENST00000409025 DEFB107AQ8IZN7 70 aa18.64■□□□□ 0.58
USP39-202ENST00000409025 SUSD6Q92537 303 aa18.64■□□□□ 0.58
USP39-202ENST00000409025 ARRDC3Q96B67 414 aa18.64■□□□□ 0.58
USP39-202ENST00000409025 MYADMQ96S97 322 aa18.64■□□□□ 0.58
USP39-202ENST00000409025 TUBB1Q9H4B7 451 aa18.64■□□□□ 0.58
USP39-202ENST00000409025 RNPEPL1Q9HAU8 725 aa18.64■□□□□ 0.58
USP39-202ENST00000409025 ITM2BQ9Y287 266 aa18.64■□□□□ 0.58
USP39-202ENST00000409025 COL4A3Q01955 1670 aa18.64■□□□□ 0.57
USP39-202ENST00000409025 FADS2P1A8MWK0 482 aa18.64■□□□□ 0.57
USP39-202ENST00000409025 H0Y858 1186 aa18.64■□□□□ 0.57
USP39-202ENST00000409025 WNT9AO14904 365 aa18.64■□□□□ 0.57
USP39-202ENST00000409025 MTX2O75431 263 aa18.64■□□□□ 0.57
USP39-202ENST00000409025 CD1EP15812 388 aa18.64■□□□□ 0.57
USP39-202ENST00000409025 PSMC3P17980 439 aa18.64■□□□□ 0.57
USP39-202ENST00000409025 PRDX3P30048 256 aaKnown RBP18.64■□□□□ 0.57
USP39-202ENST00000409025 NUDT2P50583 147 aa18.64■□□□□ 0.57
USP39-202ENST00000409025 GTF2H2Q13888 395 aa18.64■□□□□ 0.57
USP39-202ENST00000409025 PHKG1Q16816 387 aa18.64■□□□□ 0.57
USP39-202ENST00000409025 C18orf21Q32NC0 220 aaPredicted RBP18.64■□□□□ 0.57
USP39-202ENST00000409025 LDLRAP1Q5SW96 308 aa18.64■□□□□ 0.57
USP39-202ENST00000409025 PLEKHS1Q5SXH7 462 aa18.64■□□□□ 0.57
USP39-202ENST00000409025 NAIF1Q69YI7 327 aaPredicted RBP18.64■□□□□ 0.57
USP39-202ENST00000409025 CES5AQ6NT32 575 aa18.64■□□□□ 0.57
USP39-202ENST00000409025 GTF2H2CQ6P1K8 395 aa18.64■□□□□ 0.57
USP39-202ENST00000409025 C16orf89Q6UX73 402 aa18.64■□□□□ 0.57
USP39-202ENST00000409025 GOLGA7Q7Z5G4 137 aa18.64■□□□□ 0.57
USP39-202ENST00000409025 RAVER1Q8IY67 606 aaKnown RBP18.64■□□□□ 0.57
USP39-202ENST00000409025 KYQ8NBH2 561 aa18.64■□□□□ 0.57
USP39-202ENST00000409025 WDR60Q8WVS4 1066 aa18.64■□□□□ 0.57
USP39-202ENST00000409025 BTN2A2Q8WVV5 523 aa18.64■□□□□ 0.57
USP39-202ENST00000409025 AP2M1Q96CW1 435 aa18.64■□□□□ 0.57
USP39-202ENST00000409025 VPS35Q96QK1 796 aa18.64■□□□□ 0.57
USP39-202ENST00000409025 GDF15Q99988 308 aa18.64■□□□□ 0.57
USP39-202ENST00000409025 WRAP53Q9BUR4 548 aaKnown RBP18.64■□□□□ 0.57
USP39-202ENST00000409025 NOL11Q9H8H0 719 aaKnown RBP18.64■□□□□ 0.57
USP39-202ENST00000409025 WWOXQ9NZC7 414 aa18.64■□□□□ 0.57
USP39-202ENST00000409025 SLC7A8Q9UHI5 535 aa18.64■□□□□ 0.57
USP39-202ENST00000409025 BTRCQ9Y297 605 aa18.64■□□□□ 0.57
USP39-202ENST00000409025 TIMM22Q9Y584 194 aa18.64■□□□□ 0.57
USP39-202ENST00000409025 PSMD12O00232 456 aaPredicted RBP18.63■□□□□ 0.57
USP39-202ENST00000409025 QSOX1O00391 747 aa18.63■□□□□ 0.57
USP39-202ENST00000409025 LINC00032P0C843 101 aa18.63■□□□□ 0.57
USP39-202ENST00000409025 METAP1P53582 386 aa18.63■□□□□ 0.57
USP39-202ENST00000409025 STX1BP61266 288 aa18.63■□□□□ 0.57
USP39-202ENST00000409025 HSPA14Q0VDF9 509 aa18.63■□□□□ 0.57
USP39-202ENST00000409025 FASTKQ14296 549 aaKnown RBP18.63■□□□□ 0.57
USP39-202ENST00000409025 TRMT5Q32P41 509 aaKnown RBP18.63■□□□□ 0.57
USP39-202ENST00000409025 PREPLQ4J6C6 727 aaPredicted RBP18.63■□□□□ 0.57
USP39-202ENST00000409025 COL13A1Q5TAT6 717 aaPredicted RBP18.63■□□□□ 0.57
USP39-202ENST00000409025 DSG4Q86SJ6 1040 aa18.63■□□□□ 0.57
USP39-202ENST00000409025 DLG3Q92796 817 aa18.63■□□□□ 0.57
USP39-202ENST00000409025 ELSPBP1Q96BH3 223 aa18.63■□□□□ 0.57
USP39-202ENST00000409025 TUBGCP3Q96CW5 907 aa18.63■□□□□ 0.57
USP39-202ENST00000409025 FAM129BQ96TA1 746 aa18.63■□□□□ 0.57
USP39-202ENST00000409025 KXD1Q9BQD3 176 aa18.63■□□□□ 0.57
USP39-202ENST00000409025 EFCAB1Q9HAE3 211 aa18.63■□□□□ 0.57
USP39-202ENST00000409025 DYRK4Q9NR20 520 aa18.63■□□□□ 0.57
USP39-202ENST00000409025 NDE1Q9NXR1 346 aa18.63■□□□□ 0.57
USP39-202ENST00000409025 SUN2Q9UH99 717 aa18.63■□□□□ 0.57
USP39-202ENST00000409025 MBD1Q9UIS9 605 aaPredicted RBP18.63■□□□□ 0.57
USP39-202ENST00000409025 ZNF225Q9UK10 706 aa18.63■□□□□ 0.57
USP39-202ENST00000409025 PTGDR2Q9Y5Y4 395 aa18.63■□□□□ 0.57
USP39-202ENST00000409025 TCF20Q9UGU0 1960 aaKnown RBP18.63■□□□□ 0.57
USP39-202ENST00000409025 TAPBPO15533 448 aa18.62■□□□□ 0.57
USP39-202ENST00000409025 NUAK1O60285 661 aa18.62■□□□□ 0.57
USP39-202ENST00000409025 OR4F21O95013 312 aa18.62■□□□□ 0.57
USP39-202ENST00000409025 FTH1P02794 183 aa18.62■□□□□ 0.57
USP39-202ENST00000409025 MPC1LP0DKB6 136 aa18.62■□□□□ 0.57
USP39-202ENST00000409025 LBPP18428 481 aa18.62■□□□□ 0.57
USP39-202ENST00000409025 ARL1P40616 181 aaPredicted RBP18.62■□□□□ 0.57
USP39-202ENST00000409025 EIF2DP41214 584 aaKnown RBP18.62■□□□□ 0.57
USP39-202ENST00000409025 HSPA7P48741 367 aa18.62■□□□□ 0.57
USP39-202ENST00000409025 TBL3Q12788 808 aaKnown RBP18.62■□□□□ 0.57
USP39-202ENST00000409025 GBX1Q14549 363 aa18.62■□□□□ 0.57
USP39-202ENST00000409025 KHDC1Q4VXA5 237 aaKnown RBP18.62■□□□□ 0.57
USP39-202ENST00000409025 GLYATL1Q969I3 302 aa18.62■□□□□ 0.57
USP39-202ENST00000409025 ATP6V1E2Q96A05 226 aa18.62■□□□□ 0.57
USP39-202ENST00000409025 RHBDF1Q96CC6 855 aa18.62■□□□□ 0.57
USP39-202ENST00000409025 RCN3Q96D15 328 aa18.62■□□□□ 0.57
USP39-202ENST00000409025 COQ10AQ96MF6 247 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms