RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 PRKAA1Q13131 559 aa8.9□□□□□ -0.98
SNORD88A-201ENST00000408314 KLF1Q13351 362 aaPredicted RBP8.9□□□□□ -0.98
SNORD88A-201ENST00000408314 GPR18Q14330 331 aa8.9□□□□□ -0.98
SNORD88A-201ENST00000408314 KRT33BQ14525 404 aa8.9□□□□□ -0.98
SNORD88A-201ENST00000408314 TGIF1Q15583 401 aa8.9□□□□□ -0.98
SNORD88A-201ENST00000408314 RPE65Q16518 533 aa8.9□□□□□ -0.98
SNORD88A-201ENST00000408314 CACHD1Q5VU97 1274 aa8.9□□□□□ -0.98
SNORD88A-201ENST00000408314 METRNLQ641Q3 311 aa8.9□□□□□ -0.98
SNORD88A-201ENST00000408314 IRGCQ6NXR0 463 aa8.9□□□□□ -0.98
SNORD88A-201ENST00000408314 NXPE1Q8N323 547 aa8.9□□□□□ -0.98
SNORD88A-201ENST00000408314 BMPERQ8N8U9 685 aa8.9□□□□□ -0.98
SNORD88A-201ENST00000408314 FAM71DQ8N9W8 422 aa8.9□□□□□ -0.98
SNORD88A-201ENST00000408314 SLC35B2Q8TB61 432 aa8.9□□□□□ -0.98
SNORD88A-201ENST00000408314 HM13Q8TCT9 377 aa8.9□□□□□ -0.98
SNORD88A-201ENST00000408314 STYXQ8WUJ0 223 aa8.9□□□□□ -0.98
SNORD88A-201ENST00000408314 RTP4Q96DX8 246 aa8.9□□□□□ -0.98
SNORD88A-201ENST00000408314 FCRL4Q96PJ5 515 aa8.9□□□□□ -0.98
SNORD88A-201ENST00000408314 FAM118BQ9BPY3 351 aa8.9□□□□□ -0.98
SNORD88A-201ENST00000408314 APOL2Q9BQE5 337 aa8.9□□□□□ -0.98
SNORD88A-201ENST00000408314 DESI2Q9BSY9 194 aa8.9□□□□□ -0.98
SNORD88A-201ENST00000408314 C10orf88Q9H8K7 445 aa8.9□□□□□ -0.98
SNORD88A-201ENST00000408314 GPN2Q9H9Y4 310 aaPredicted RBP8.9□□□□□ -0.98
SNORD88A-201ENST00000408314 UGT1A7Q9HAW7 530 aa8.9□□□□□ -0.98
SNORD88A-201ENST00000408314 UGT1A10Q9HAW8 530 aa8.9□□□□□ -0.98
SNORD88A-201ENST00000408314 UGT1A8Q9HAW9 530 aa8.9□□□□□ -0.98
SNORD88A-201ENST00000408314 PDE7BQ9NP56 450 aa8.9□□□□□ -0.98
SNORD88A-201ENST00000408314 IMP3Q9NV31 184 aaKnown RBP8.9□□□□□ -0.98
SNORD88A-201ENST00000408314 OCIAD1Q9NX40 245 aa8.9□□□□□ -0.98
SNORD88A-201ENST00000408314 SCHIP1Q9P0W5 487 aaPredicted RBP8.9□□□□□ -0.98
SNORD88A-201ENST00000408314 TMEM184BQ9Y519 407 aaPredicted RBP8.9□□□□□ -0.98
SNORD88A-201ENST00000408314 TLCD2A6NGC4 264 aa8.89□□□□□ -0.99
SNORD88A-201ENST00000408314 AP3B1O00203 1094 aa8.89□□□□□ -0.99
SNORD88A-201ENST00000408314 GAPDHSO14556 408 aaPredicted RBP8.89□□□□□ -0.99
SNORD88A-201ENST00000408314 DDX3YO15523 660 aaKnown RBP8.89□□□□□ -0.99
SNORD88A-201ENST00000408314 KDM1AO60341 852 aa8.89□□□□□ -0.99
SNORD88A-201ENST00000408314 STK17BO94768 372 aa8.89□□□□□ -0.99
SNORD88A-201ENST00000408314 AP2A2O94973 939 aa8.89□□□□□ -0.99
SNORD88A-201ENST00000408314 CCDC175P0C221 793 aa8.89□□□□□ -0.99
SNORD88A-201ENST00000408314 ATP1B2P14415 290 aaPredicted RBP8.89□□□□□ -0.99
SNORD88A-201ENST00000408314 BRAFP15056 766 aa8.89□□□□□ -0.99
SNORD88A-201ENST00000408314 TYRP1P17643 537 aa8.89□□□□□ -0.99
SNORD88A-201ENST00000408314 MC4RP32245 332 aa8.89□□□□□ -0.99
SNORD88A-201ENST00000408314 PPARGP37231 505 aaPredicted RBP8.89□□□□□ -0.99
SNORD88A-201ENST00000408314 FDFT1P37268 417 aa8.89□□□□□ -0.99
SNORD88A-201ENST00000408314 CD151P48509 253 aa8.89□□□□□ -0.99
SNORD88A-201ENST00000408314 CTSCP53634 463 aa8.89□□□□□ -0.99
SNORD88A-201ENST00000408314 GFERP55789 205 aa8.89□□□□□ -0.99
SNORD88A-201ENST00000408314 PLOD1Q02809 727 aaPredicted RBP8.89□□□□□ -0.99
SNORD88A-201ENST00000408314 ACY1Q03154 408 aa8.89□□□□□ -0.99
SNORD88A-201ENST00000408314 CACNG1Q06432 222 aa8.89□□□□□ -0.99
SNORD88A-201ENST00000408314 FOXM1Q08050 763 aa8.89□□□□□ -0.99
SNORD88A-201ENST00000408314 CDH17Q12864 832 aa8.89□□□□□ -0.99
SNORD88A-201ENST00000408314 RPA4Q13156 261 aa8.89□□□□□ -0.99
SNORD88A-201ENST00000408314 SEPT6Q14141 434 aa8.89□□□□□ -0.99
SNORD88A-201ENST00000408314 NFE2L1Q14494 772 aa8.89□□□□□ -0.99
SNORD88A-201ENST00000408314 GSE1Q14687 1217 aa8.89□□□□□ -0.99
SNORD88A-201ENST00000408314 RPS6KA1Q15418 735 aa8.89□□□□□ -0.99
SNORD88A-201ENST00000408314 SKIDA1Q1XH10 827 aa8.89□□□□□ -0.99
SNORD88A-201ENST00000408314 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.89□□□□□ -0.99
SNORD88A-201ENST00000408314 TMTC4Q5T4D3 741 aa8.89□□□□□ -0.99
SNORD88A-201ENST00000408314 LYPLAL1Q5VWZ2 237 aa8.89□□□□□ -0.99
SNORD88A-201ENST00000408314 KIAA1614Q5VZ46 1190 aa8.89□□□□□ -0.99
SNORD88A-201ENST00000408314 C4orf22Q6V702 233 aa8.89□□□□□ -0.99
SNORD88A-201ENST00000408314 PPP1R21Q6ZMI0 780 aa8.89□□□□□ -0.99
SNORD88A-201ENST00000408314 DET1Q7L5Y6 550 aa8.89□□□□□ -0.99
SNORD88A-201ENST00000408314 NLRP9Q7RTR0 991 aa8.89□□□□□ -0.99
SNORD88A-201ENST00000408314 ZNF605Q86T29 641 aa8.89□□□□□ -0.99
SNORD88A-201ENST00000408314 VASH2Q86V25 355 aa8.89□□□□□ -0.99
SNORD88A-201ENST00000408314 PPP1R3BQ86XI6 285 aa8.89□□□□□ -0.99
SNORD88A-201ENST00000408314 GAS2L3Q86XJ1 694 aa8.89□□□□□ -0.99
SNORD88A-201ENST00000408314 CCDC89Q8N998 374 aa8.89□□□□□ -0.99
SNORD88A-201ENST00000408314 DNAAF3Q8N9W5 541 aa8.89□□□□□ -0.99
SNORD88A-201ENST00000408314 SIDT2Q8NBJ9 832 aaKnown RBP8.89□□□□□ -0.99
SNORD88A-201ENST00000408314 SEC14L1Q92503 715 aa8.89□□□□□ -0.99
SNORD88A-201ENST00000408314 SLC45A3Q96JT2 553 aa8.89□□□□□ -0.99
SNORD88A-201ENST00000408314 C12orf66Q96MD2 445 aa8.89□□□□□ -0.99
SNORD88A-201ENST00000408314 GORASP1Q9BQQ3 440 aa8.89□□□□□ -0.99
SNORD88A-201ENST00000408314 TSSK1BQ9BXA7 367 aa8.89□□□□□ -0.99
SNORD88A-201ENST00000408314 ADNPQ9H2P0 1102 aa8.89□□□□□ -0.99
SNORD88A-201ENST00000408314 NLE1Q9NVX2 485 aaPredicted RBP8.89□□□□□ -0.99
SNORD88A-201ENST00000408314 SIDT1Q9NXL6 827 aaKnown RBP8.89□□□□□ -0.99
SNORD88A-201ENST00000408314 ZDHHC3Q9NYG2 299 aa8.89□□□□□ -0.99
SNORD88A-201ENST00000408314 TRIM10Q9UDY6 481 aa8.89□□□□□ -0.99
SNORD88A-201ENST00000408314 PILRAQ9UKJ1 303 aa8.89□□□□□ -0.99
SNORD88A-201ENST00000408314 RARRES3Q9UL19 164 aa8.89□□□□□ -0.99
SNORD88A-201ENST00000408314 PACSIN2Q9UNF0 486 aaPredicted RBP8.89□□□□□ -0.99
SNORD88A-201ENST00000408314 ZNF148Q9UQR1 794 aa8.89□□□□□ -0.99
SNORD88A-201ENST00000408314 ZKSCAN5Q9Y2L8 839 aa8.89□□□□□ -0.99
SNORD88A-201ENST00000408314 HEMK1Q9Y5R4 338 aaPredicted RBP8.89□□□□□ -0.99
SNORD88A-201ENST00000408314 CAPN6Q9Y6Q1 641 aa8.89□□□□□ -0.99
SNORD88A-201ENST00000408314 COL6A6A6NMZ7 2263 aa8.89□□□□□ -0.99
SNORD88A-201ENST00000408314 BAHCC1Q9P281 2608 aa8.89□□□□□ -0.99
SNORD88A-201ENST00000408314 LOC400499M0QZD8 3231 aa8.89□□□□□ -0.99
SNORD88A-201ENST00000408314 KALRNO60229 2985 aa8.88□□□□□ -0.99
SNORD88A-201ENST00000408314 UBA6A0AVT1 1052 aaPredicted RBP8.88□□□□□ -0.99
SNORD88A-201ENST00000408314 HEATR9A2RTY3 570 aa8.88□□□□□ -0.99
SNORD88A-201ENST00000408314 OR5K3A6NET4 321 aa8.88□□□□□ -0.99
SNORD88A-201ENST00000408314 GPR39O43194 453 aa8.88□□□□□ -0.99
SNORD88A-201ENST00000408314 LDB2O43679 373 aa8.88□□□□□ -0.99
SNORD88A-201ENST00000408314 FTH1P02794 183 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms