RNA–Protein interactions for RNA: ENST00000407977.6

RNF43-201, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RNF43, Length 5,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-201ENST00000407977 MCMBPQ9BTE3 642 aa12.82□□□□□ -0.36
RNF43-201ENST00000407977 C1orf109Q9NX04 203 aa12.82□□□□□ -0.36
RNF43-201ENST00000407977 NOCTQ9UK39 431 aaKnown RBP12.82□□□□□ -0.36
RNF43-201ENST00000407977 TSPOAP1O95153 1857 aa12.82□□□□□ -0.36
RNF43-201ENST00000407977 COL1A2P08123 1366 aa12.82□□□□□ -0.36
RNF43-201ENST00000407977 PIP5K1BO14986 540 aa12.82□□□□□ -0.36
RNF43-201ENST00000407977 DNTTP04053 509 aa12.82□□□□□ -0.36
RNF43-201ENST00000407977 SAGP10523 405 aaPredicted RBP12.82□□□□□ -0.36
RNF43-201ENST00000407977 CDH12P55289 794 aa12.82□□□□□ -0.36
RNF43-201ENST00000407977 RGS8P57771 180 aaPredicted RBP12.82□□□□□ -0.36
RNF43-201ENST00000407977 EML3Q32P44 896 aa12.82□□□□□ -0.36
RNF43-201ENST00000407977 IQCCQ4KMZ1 466 aa12.82□□□□□ -0.36
RNF43-201ENST00000407977 CRTC2Q53ET0 693 aaPredicted RBP12.82□□□□□ -0.36
RNF43-201ENST00000407977 FAM46CQ5VWP2 391 aa12.82□□□□□ -0.36
RNF43-201ENST00000407977 CATSPERGQ6ZRH7 1159 aa12.82□□□□□ -0.36
RNF43-201ENST00000407977 OR8H3Q8N146 312 aa12.82□□□□□ -0.36
RNF43-201ENST00000407977 CLCC1Q96S66 551 aa12.82□□□□□ -0.36
RNF43-201ENST00000407977 CST11Q9H112 138 aa12.82□□□□□ -0.36
RNF43-201ENST00000407977 IKZF2Q9UKS7 526 aa12.82□□□□□ -0.36
RNF43-201ENST00000407977 MATN3O15232 486 aa12.82□□□□□ -0.36
RNF43-201ENST00000407977 MID1O15344 667 aa12.82□□□□□ -0.36
RNF43-201ENST00000407977 ESR1P03372 595 aa12.82□□□□□ -0.36
RNF43-201ENST00000407977 AOC1P19801 751 aa12.82□□□□□ -0.36
RNF43-201ENST00000407977 CRYBB1P53674 252 aaPredicted RBP12.82□□□□□ -0.36
RNF43-201ENST00000407977 C9orf57Q5W0N0 161 aa12.82□□□□□ -0.36
RNF43-201ENST00000407977 ZNF420Q8TAQ5 688 aaPredicted RBP12.82□□□□□ -0.36
RNF43-201ENST00000407977 MFSD3Q96ES6 412 aa12.82□□□□□ -0.36
RNF43-201ENST00000407977 C12orf66Q96MD2 445 aa12.82□□□□□ -0.36
RNF43-201ENST00000407977 TUBA1CQ9BQE3 449 aa12.82□□□□□ -0.36
RNF43-201ENST00000407977 RSPH9Q9H1X1 276 aaPredicted RBP12.82□□□□□ -0.36
RNF43-201ENST00000407977 ARHGEF4Q9NR80 690 aa12.82□□□□□ -0.36
RNF43-201ENST00000407977 PDHXO00330 501 aa12.82□□□□□ -0.36
RNF43-201ENST00000407977 PLOD2O00469 737 aa12.82□□□□□ -0.36
RNF43-201ENST00000407977 NME6O75414 186 aaPredicted RBP12.82□□□□□ -0.36
RNF43-201ENST00000407977 CD247P20963 164 aa12.82□□□□□ -0.36
RNF43-201ENST00000407977 CLCN2P51788 898 aa12.82□□□□□ -0.36
RNF43-201ENST00000407977 MRPS6P82932 125 aaKnown RBP12.82□□□□□ -0.36
RNF43-201ENST00000407977 C2orf80Q0P641 193 aa12.82□□□□□ -0.36
RNF43-201ENST00000407977 PEX6Q13608 980 aa12.82□□□□□ -0.36
RNF43-201ENST00000407977 ZNF567Q8N184 647 aa12.82□□□□□ -0.36
RNF43-201ENST00000407977 XAGE5Q8WWM1 108 aa12.82□□□□□ -0.36
RNF43-201ENST00000407977 MRPL45Q9BRJ2 306 aaKnown RBP12.82□□□□□ -0.36
RNF43-201ENST00000407977 H0Y858 1186 aa12.81□□□□□ -0.36
RNF43-201ENST00000407977 ACOX3O15254 700 aa12.81□□□□□ -0.36
RNF43-201ENST00000407977 TLR5O60602 858 aa12.81□□□□□ -0.36
RNF43-201ENST00000407977 ZNF432O94892 652 aa12.81□□□□□ -0.36
RNF43-201ENST00000407977 TOP3BO95985 862 aaKnown RBP12.81□□□□□ -0.36
RNF43-201ENST00000407977 MT-ND1P03886 318 aa12.81□□□□□ -0.36
RNF43-201ENST00000407977 DCDC1P59894 354 aa12.81□□□□□ -0.36
RNF43-201ENST00000407977 ERVK-8P63133 956 aa12.81□□□□□ -0.36
RNF43-201ENST00000407977 EEF1DP3Q658K8 133 aa12.81□□□□□ -0.36
RNF43-201ENST00000407977 QSOX2Q6ZRP7 698 aa12.81□□□□□ -0.36
RNF43-201ENST00000407977 CRYBG2Q8N1P7 616 aa12.81□□□□□ -0.36
RNF43-201ENST00000407977 LRRN4Q8WUT4 740 aa12.81□□□□□ -0.36
RNF43-201ENST00000407977 RC3H2Q9HBD1 1191 aaKnown RBP12.81□□□□□ -0.36
RNF43-201ENST00000407977 ZNF282Q9UDV7 671 aaPredicted RBP12.81□□□□□ -0.36
RNF43-201ENST00000407977 RBM7Q9Y580 266 aaKnown RBP12.81□□□□□ -0.36
RNF43-201ENST00000407977 IQCMA0A1B0GVH7 501 aa12.81□□□□□ -0.36
RNF43-201ENST00000407977 C22orf31O95567 290 aa12.81□□□□□ -0.36
RNF43-201ENST00000407977 ACSL1P33121 698 aa12.81□□□□□ -0.36
RNF43-201ENST00000407977 SPAM1P38567 509 aa12.81□□□□□ -0.36
RNF43-201ENST00000407977 ADCYAP1R1P41586 468 aa12.81□□□□□ -0.36
RNF43-201ENST00000407977 RBM34P42696 430 aaKnown RBP12.81□□□□□ -0.36
RNF43-201ENST00000407977 RHBDF2Q6PJF5 856 aa12.81□□□□□ -0.36
RNF43-201ENST00000407977 RAVER1Q8IY67 606 aaKnown RBP12.81□□□□□ -0.36
RNF43-201ENST00000407977 CPNE9Q8IYJ1 553 aa12.81□□□□□ -0.36
RNF43-201ENST00000407977 RUVBL1Q9Y265 456 aaKnown RBP12.81□□□□□ -0.36
RNF43-201ENST00000407977 DIP2BQ9P265 1576 aa12.81□□□□□ -0.36
RNF43-201ENST00000407977 ATG13O75143 517 aa12.81□□□□□ -0.36
RNF43-201ENST00000407977 GADD45GO95257 159 aa12.81□□□□□ -0.36
RNF43-201ENST00000407977 CTPS1P17812 591 aa12.81□□□□□ -0.36
RNF43-201ENST00000407977 HOXA10P31260 410 aaPredicted RBP12.81□□□□□ -0.36
RNF43-201ENST00000407977 PBX3P40426 434 aa12.81□□□□□ -0.36
RNF43-201ENST00000407977 SYCE2Q6PIF2 218 aa12.81□□□□□ -0.36
RNF43-201ENST00000407977 OTOP3Q7RTS5 596 aa12.81□□□□□ -0.36
RNF43-201ENST00000407977 HID1Q8IV36 788 aa12.81□□□□□ -0.36
RNF43-201ENST00000407977 NIPA2Q8N8Q9 360 aa12.81□□□□□ -0.36
RNF43-201ENST00000407977 RNF31Q96EP0 1072 aa12.81□□□□□ -0.36
RNF43-201ENST00000407977 ZNF570Q96NI8 536 aa12.81□□□□□ -0.36
RNF43-201ENST00000407977 KLHL5Q96PQ7 755 aa12.81□□□□□ -0.36
RNF43-201ENST00000407977 SLC4A9Q96Q91 983 aa12.81□□□□□ -0.36
RNF43-201ENST00000407977 ABCG8Q9H221 673 aa12.81□□□□□ -0.36
RNF43-201ENST00000407977 KIAA1522Q9P206 1035 aaPredicted RBP12.81□□□□□ -0.36
RNF43-201ENST00000407977 XKRYO14609 159 aa12.81□□□□□ -0.36
RNF43-201ENST00000407977 CTSEP14091 401 aa12.81□□□□□ -0.36
RNF43-201ENST00000407977 RBBP4Q09028 425 aa12.81□□□□□ -0.36
RNF43-201ENST00000407977 CBX2Q14781 532 aaPredicted RBP12.81□□□□□ -0.36
RNF43-201ENST00000407977 MED27Q6P2C8 311 aa12.81□□□□□ -0.36
RNF43-201ENST00000407977 ZNF613Q6PF04 617 aa12.81□□□□□ -0.36
RNF43-201ENST00000407977 ULK3Q6PHR2 472 aa12.81□□□□□ -0.36
RNF43-201ENST00000407977 PLCZ1Q86YW0 608 aa12.81□□□□□ -0.36
RNF43-201ENST00000407977 KCNS3Q9BQ31 491 aa12.81□□□□□ -0.36
RNF43-201ENST00000407977 FTHL17Q9BXU8 183 aa12.81□□□□□ -0.36
RNF43-201ENST00000407977 BHLHE41Q9C0J9 482 aaPredicted RBP12.81□□□□□ -0.36
RNF43-201ENST00000407977 POLR2J2Q9GZM3 115 aaKnown RBP12.81□□□□□ -0.36
RNF43-201ENST00000407977 TFB2MQ9H5Q4 396 aaKnown RBP12.81□□□□□ -0.36
RNF43-201ENST00000407977 PRELID1Q9Y255 219 aa12.81□□□□□ -0.36
RNF43-201ENST00000407977 MEMO1Q9Y316 297 aa12.81□□□□□ -0.36
RNF43-201ENST00000407977 WNT10BO00744 389 aa12.81□□□□□ -0.36
RNF43-201ENST00000407977 GABRDO14764 452 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms