RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 TRAF6Q9Y4K3 522 aa25.21■■□□□ 1.63
CPNE1-205ENST00000401607 PIAS3Q9Y6X2 628 aa25.21■■□□□ 1.63
CPNE1-205ENST00000401607 OR2AG2A6NM03 316 aa25.2■■□□□ 1.62
CPNE1-205ENST00000401607 RAD51BO15315 384 aa25.2■■□□□ 1.62
CPNE1-205ENST00000401607 FFAR2O15552 330 aa25.2■■□□□ 1.62
CPNE1-205ENST00000401607 MBTPS2O43462 519 aa25.2■■□□□ 1.62
CPNE1-205ENST00000401607 RNASEH1O60930 286 aaKnown RBP25.2■■□□□ 1.62
CPNE1-205ENST00000401607 C5AR1P21730 350 aa25.2■■□□□ 1.62
CPNE1-205ENST00000401607 NTSR1P30989 418 aa25.2■■□□□ 1.62
CPNE1-205ENST00000401607 CTSCP53634 463 aa25.2■■□□□ 1.62
CPNE1-205ENST00000401607 PHKG1Q16816 387 aa25.2■■□□□ 1.62
CPNE1-205ENST00000401607 RALGPS2Q86X27 583 aaPredicted RBP25.2■■□□□ 1.62
CPNE1-205ENST00000401607 PHYKPLQ8IUZ5 450 aa25.2■■□□□ 1.62
CPNE1-205ENST00000401607 SLC44A3Q8N4M1 653 aa25.2■■□□□ 1.62
CPNE1-205ENST00000401607 ESAMQ96AP7 390 aa25.2■■□□□ 1.62
CPNE1-205ENST00000401607 MAELQ96JY0 434 aaKnown RBP25.2■■□□□ 1.62
CPNE1-205ENST00000401607 ZBTB26Q9HCK0 441 aa25.2■■□□□ 1.62
CPNE1-205ENST00000401607 LIMD1Q9UGP4 676 aa25.2■■□□□ 1.62
CPNE1-205ENST00000401607 PRR5-ARHGAP8B1AHC4 643 aa25.19■■□□□ 1.62
CPNE1-205ENST00000401607 E9PBE3 544 aa25.19■■□□□ 1.62
CPNE1-205ENST00000401607 NUAK1O60285 661 aa25.19■■□□□ 1.62
CPNE1-205ENST00000401607 KLHL41O60662 606 aa25.19■■□□□ 1.62
CPNE1-205ENST00000401607 RPS14P62263 151 aaKnown RBP25.19■■□□□ 1.62
CPNE1-205ENST00000401607 ARHGAP8P85298 464 aa25.19■■□□□ 1.62
CPNE1-205ENST00000401607 BTKQ06187 659 aa25.19■■□□□ 1.62
CPNE1-205ENST00000401607 HSPA14Q0VDF9 509 aa25.19■■□□□ 1.62
CPNE1-205ENST00000401607 TMEM115Q12893 351 aaPredicted RBP25.19■■□□□ 1.62
CPNE1-205ENST00000401607 SMAD4Q13485 552 aaKnown RBP25.19■■□□□ 1.62
CPNE1-205ENST00000401607 LSM12Q3MHD2 195 aaKnown RBP25.19■■□□□ 1.62
CPNE1-205ENST00000401607 PLEKHS1Q5SXH7 462 aa25.19■■□□□ 1.62
CPNE1-205ENST00000401607 CLEC6AQ6EIG7 209 aa25.19■■□□□ 1.62
CPNE1-205ENST00000401607 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP25.19■■□□□ 1.62
CPNE1-205ENST00000401607 NLRP8Q86W28 1048 aa25.19■■□□□ 1.62
CPNE1-205ENST00000401607 VRK3Q8IV63 474 aa25.19■■□□□ 1.62
CPNE1-205ENST00000401607 IL17RCQ8NAC3 791 aa25.19■■□□□ 1.62
CPNE1-205ENST00000401607 OR2T3Q8NH03 318 aa25.19■■□□□ 1.62
CPNE1-205ENST00000401607 KLHL29Q96CT2 875 aa25.19■■□□□ 1.62
CPNE1-205ENST00000401607 NSL1Q96IY1 281 aa25.19■■□□□ 1.62
CPNE1-205ENST00000401607 GAS2L1Q99501 681 aaPredicted RBP25.19■■□□□ 1.62
CPNE1-205ENST00000401607 MID1IP1Q9NPA3 183 aa25.19■■□□□ 1.62
CPNE1-205ENST00000401607 EIF2B4Q9UI10 523 aaKnown RBP25.19■■□□□ 1.62
CPNE1-205ENST00000401607 CDYLQ9Y232 598 aa25.19■■□□□ 1.62
CPNE1-205ENST00000401607 UNC80Q8N2C7 3258 aa25.19■■□□□ 1.62
CPNE1-205ENST00000401607 SDHDO14521 159 aa25.18■■□□□ 1.62
CPNE1-205ENST00000401607 AP1G1O43747 822 aa25.18■■□□□ 1.62
CPNE1-205ENST00000401607 ADAM23O75077 832 aa25.18■■□□□ 1.62
CPNE1-205ENST00000401607 SKAP2O75563 359 aaPredicted RBP25.18■■□□□ 1.62
CPNE1-205ENST00000401607 FTH1P02794 183 aa25.18■■□□□ 1.62
CPNE1-205ENST00000401607 GPR1P46091 355 aa25.18■■□□□ 1.62
CPNE1-205ENST00000401607 NAA20P61599 178 aa25.18■■□□□ 1.62
CPNE1-205ENST00000401607 LCP2Q13094 533 aa25.18■■□□□ 1.62
CPNE1-205ENST00000401607 BOP1Q14137 746 aaKnown RBP25.18■■□□□ 1.62
CPNE1-205ENST00000401607 C18orf21Q32NC0 220 aaPredicted RBP25.18■■□□□ 1.62
CPNE1-205ENST00000401607 IER5LQ5T953 404 aa25.18■■□□□ 1.62
CPNE1-205ENST00000401607 METTL21CQ5VZV1 264 aa25.18■■□□□ 1.62
CPNE1-205ENST00000401607 ZNF776Q68DI1 518 aaPredicted RBP25.18■■□□□ 1.62
CPNE1-205ENST00000401607 RAET1GQ6H3X3 334 aa25.18■■□□□ 1.62
CPNE1-205ENST00000401607 KIRREL3Q8IZU9 778 aa25.18■■□□□ 1.62
CPNE1-205ENST00000401607 KIF2BQ8N4N8 673 aa25.18■■□□□ 1.62
CPNE1-205ENST00000401607 HDDC3Q8N4P3 179 aa25.18■■□□□ 1.62
CPNE1-205ENST00000401607 AFAP1L2Q8N4X5 818 aa25.18■■□□□ 1.62
CPNE1-205ENST00000401607 AGAP11Q8TF27 550 aa25.18■■□□□ 1.62
CPNE1-205ENST00000401607 TUBB6Q9BUF5 446 aa25.18■■□□□ 1.62
CPNE1-205ENST00000401607 CCDC28BQ9BUN5 200 aa25.18■■□□□ 1.62
CPNE1-205ENST00000401607 SEMA4BQ9NPR2 832 aaPredicted RBP25.18■■□□□ 1.62
CPNE1-205ENST00000401607 LNPEPQ9UIQ6 1025 aa25.18■■□□□ 1.62
CPNE1-205ENST00000401607 COLQQ9Y215 455 aaPredicted RBP25.18■■□□□ 1.62
CPNE1-205ENST00000401607 A0A1B0GTL3 188 aa25.18■■□□□ 1.62
CPNE1-205ENST00000401607 TRPC5OSA6NMA1 111 aa25.18■■□□□ 1.62
CPNE1-205ENST00000401607 QSOX1O00391 747 aa25.18■■□□□ 1.62
CPNE1-205ENST00000401607 SOX1O00570 391 aaPredicted RBP25.18■■□□□ 1.62
CPNE1-205ENST00000401607 E2F3O00716 465 aa25.18■■□□□ 1.62
CPNE1-205ENST00000401607 FGF4P08620 206 aa25.18■■□□□ 1.62
CPNE1-205ENST00000401607 PRLHRP49683 370 aa25.18■■□□□ 1.62
CPNE1-205ENST00000401607 ACAD11Q709F0 780 aa25.18■■□□□ 1.62
CPNE1-205ENST00000401607 ELMO1Q92556 727 aa25.18■■□□□ 1.62
CPNE1-205ENST00000401607 LRMDAQ9H2I8 198 aa25.18■■□□□ 1.62
CPNE1-205ENST00000401607 UBE2ZQ9H832 354 aaPredicted RBP25.18■■□□□ 1.62
CPNE1-205ENST00000401607 A0A1W2PP55 124 aa25.17■■□□□ 1.62
CPNE1-205ENST00000401607 KPNA5O15131 536 aa25.17■■□□□ 1.62
CPNE1-205ENST00000401607 MPC1LP0DKB6 136 aa25.17■■□□□ 1.62
CPNE1-205ENST00000401607 INHBCP55103 352 aa25.17■■□□□ 1.62
CPNE1-205ENST00000401607 KCNJ2P63252 427 aa25.17■■□□□ 1.62
CPNE1-205ENST00000401607 PCBP2Q15366 365 aaKnown RBP eCLIP25.17■■□□□ 1.626e-8■■□□□ 12.8
CPNE1-205ENST00000401607 TBCCQ15814 346 aa25.17■■□□□ 1.62
CPNE1-205ENST00000401607 UGT3A2Q3SY77 523 aa25.17■■□□□ 1.62
CPNE1-205ENST00000401607 TRIM74Q86UV6 250 aa25.17■■□□□ 1.62
CPNE1-205ENST00000401607 CLYBLQ8N0X4 340 aa25.17■■□□□ 1.62
CPNE1-205ENST00000401607 DNASE1L2Q92874 299 aa25.17■■□□□ 1.62
CPNE1-205ENST00000401607 MKRN2Q9H000 416 aaKnown RBP25.17■■□□□ 1.62
CPNE1-205ENST00000401607 C8orf33Q9H7E9 229 aaPredicted RBP25.17■■□□□ 1.62
CPNE1-205ENST00000401607 MEAF6Q9HAF1 191 aa25.17■■□□□ 1.62
CPNE1-205ENST00000401607 RDH14Q9HBH5 336 aa25.17■■□□□ 1.62
CPNE1-205ENST00000401607 ARHGEF3Q9NR81 526 aa25.17■■□□□ 1.62
CPNE1-205ENST00000401607 PTBP2Q9UKA9 531 aaKnown RBP25.17■■□□□ 1.62
CPNE1-205ENST00000401607 TMEM202A6NGA9 273 aa25.16■■□□□ 1.62
CPNE1-205ENST00000401607 TAPBPO15533 448 aa25.16■■□□□ 1.62
CPNE1-205ENST00000401607 TSPAN6O43657 245 aa25.16■■□□□ 1.62
CPNE1-205ENST00000401607 GPC4O75487 556 aa25.16■■□□□ 1.62
CPNE1-205ENST00000401607 GUCA1CO95843 209 aa25.16■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms