RNA–Protein interactions for RNA: ENST00000400214.2

HMGB3P7-201, Transcript of high mobility group box 3 pseudogene 7, humanhuman

BASIC

Gene HMGB3P7, Length 611 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P7-201ENST00000400214 ENDOUP21128 410 aaKnown RBP5.35□□□□□ -1.55
HMGB3P7-201ENST00000400214 AHCYP23526 432 aa5.35□□□□□ -1.55
HMGB3P7-201ENST00000400214 TACR1P25103 407 aa5.35□□□□□ -1.55
HMGB3P7-201ENST00000400214 RPL10P27635 214 aaKnown RBP5.35□□□□□ -1.55
HMGB3P7-201ENST00000400214 CASP1P29466 404 aa5.35□□□□□ -1.55
HMGB3P7-201ENST00000400214 CHRNA3P32297 505 aa5.35□□□□□ -1.55
HMGB3P7-201ENST00000400214 GLUD2P49448 558 aa5.35□□□□□ -1.55
HMGB3P7-201ENST00000400214 CLCN4P51793 760 aa5.35□□□□□ -1.55
HMGB3P7-201ENST00000400214 CLCNKBP51801 687 aa5.35□□□□□ -1.55
HMGB3P7-201ENST00000400214 ZNF135P52742 658 aaPredicted RBP5.35□□□□□ -1.55
HMGB3P7-201ENST00000400214 METAP1P53582 386 aa5.35□□□□□ -1.55
HMGB3P7-201ENST00000400214 OSTNP61366 133 aa5.35□□□□□ -1.55
HMGB3P7-201ENST00000400214 TFF2Q03403 129 aa5.35□□□□□ -1.55
HMGB3P7-201ENST00000400214 DLX2Q07687 328 aaPredicted RBP5.35□□□□□ -1.55
HMGB3P7-201ENST00000400214 ZBTB17Q13105 803 aa5.35□□□□□ -1.55
HMGB3P7-201ENST00000400214 THOC5Q13769 683 aaKnown RBP5.35□□□□□ -1.55
HMGB3P7-201ENST00000400214 CBFBQ13951 182 aa5.35□□□□□ -1.55
HMGB3P7-201ENST00000400214 KNOP1Q1ED39 458 aaKnown RBP5.35□□□□□ -1.55
HMGB3P7-201ENST00000400214 C19orf54Q5BKX5 351 aa5.35□□□□□ -1.55
HMGB3P7-201ENST00000400214 ZNF667Q5HYK9 610 aa5.35□□□□□ -1.55
HMGB3P7-201ENST00000400214 ARHGAP40Q5TG30 622 aa5.35□□□□□ -1.55
HMGB3P7-201ENST00000400214 PLPP4Q5VZY2 271 aa5.35□□□□□ -1.55
HMGB3P7-201ENST00000400214 SEZ6L2Q6UXD5 910 aa5.35□□□□□ -1.55
HMGB3P7-201ENST00000400214 SLCO4C1Q6ZQN7 724 aa5.35□□□□□ -1.55
HMGB3P7-201ENST00000400214 C22orf34Q6ZV56 151 aa5.35□□□□□ -1.55
HMGB3P7-201ENST00000400214 TAS1R1Q7RTX1 841 aa5.35□□□□□ -1.55
HMGB3P7-201ENST00000400214 GPRIN1Q7Z2K8 1008 aa5.35□□□□□ -1.55
HMGB3P7-201ENST00000400214 CEP57Q86XR8 500 aa5.35□□□□□ -1.55
HMGB3P7-201ENST00000400214 DHX40Q8IX18 779 aaKnown RBP5.35□□□□□ -1.55
HMGB3P7-201ENST00000400214 MMP21Q8N119 569 aa5.35□□□□□ -1.55
HMGB3P7-201ENST00000400214 MFSD4AQ8N468 514 aa5.35□□□□□ -1.55
HMGB3P7-201ENST00000400214 SMRP1Q8NCR6 262 aa5.35□□□□□ -1.55
HMGB3P7-201ENST00000400214 FAM46DQ8NEK8 389 aa5.35□□□□□ -1.55
HMGB3P7-201ENST00000400214 LPCAT1Q8NF37 534 aa5.35□□□□□ -1.55
HMGB3P7-201ENST00000400214 CADM4Q8NFZ8 388 aa5.35□□□□□ -1.55
HMGB3P7-201ENST00000400214 PSMA8Q8TAA3 256 aa5.35□□□□□ -1.55
HMGB3P7-201ENST00000400214 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.35□□□□□ -1.55
HMGB3P7-201ENST00000400214 ZNF417Q8TAU3 575 aa5.35□□□□□ -1.55
HMGB3P7-201ENST00000400214 SLC2A12Q8TD20 617 aa5.35□□□□□ -1.55
HMGB3P7-201ENST00000400214 HDAC7Q8WUI4 952 aa5.35□□□□□ -1.55
HMGB3P7-201ENST00000400214 SCFD1Q8WVM8 642 aa5.35□□□□□ -1.55
HMGB3P7-201ENST00000400214 PTERQ96BW5 349 aa5.35□□□□□ -1.55
HMGB3P7-201ENST00000400214 FCRL2Q96LA5 508 aaPredicted RBP5.35□□□□□ -1.55
HMGB3P7-201ENST00000400214 CNOT6LQ96LI5 555 aaKnown RBP5.35□□□□□ -1.55
HMGB3P7-201ENST00000400214 C5orf34Q96MH7 638 aa5.35□□□□□ -1.55
HMGB3P7-201ENST00000400214 KLHL5Q96PQ7 755 aa5.35□□□□□ -1.55
HMGB3P7-201ENST00000400214 ZNF587Q96SQ5 575 aaPredicted RBP5.35□□□□□ -1.55
HMGB3P7-201ENST00000400214 MYOCQ99972 504 aa5.35□□□□□ -1.55
HMGB3P7-201ENST00000400214 MSTO1Q9BUK6 570 aa5.35□□□□□ -1.55
HMGB3P7-201ENST00000400214 SLC46A2Q9BY10 475 aa5.35□□□□□ -1.55
HMGB3P7-201ENST00000400214 TINAGL1Q9GZM7 467 aaPredicted RBP5.35□□□□□ -1.55
HMGB3P7-201ENST00000400214 CTDSP1Q9GZU7 261 aa5.35□□□□□ -1.55
HMGB3P7-201ENST00000400214 RNF32Q9H0A6 362 aa5.35□□□□□ -1.55
HMGB3P7-201ENST00000400214 S1PR5Q9H228 398 aa5.35□□□□□ -1.55
HMGB3P7-201ENST00000400214 BLZF1Q9H2G9 400 aa5.35□□□□□ -1.55
HMGB3P7-201ENST00000400214 IKZF4Q9H2S9 585 aa5.35□□□□□ -1.55
HMGB3P7-201ENST00000400214 EPB41L4BQ9H329 900 aa5.35□□□□□ -1.55
HMGB3P7-201ENST00000400214 SYNPO2LQ9H987 977 aa5.35□□□□□ -1.55
HMGB3P7-201ENST00000400214 RPF1Q9H9Y2 349 aaKnown RBP5.35□□□□□ -1.55
HMGB3P7-201ENST00000400214 FBRSL1Q9HCM7 1045 aaKnown RBP5.35□□□□□ -1.55
HMGB3P7-201ENST00000400214 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP5.35□□□□□ -1.55
HMGB3P7-201ENST00000400214 MRPL17Q9NRX2 175 aaKnown RBP5.35□□□□□ -1.55
HMGB3P7-201ENST00000400214 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.35□□□□□ -1.55
HMGB3P7-201ENST00000400214 TBC1D7Q9P0N9 293 aa5.35□□□□□ -1.55
HMGB3P7-201ENST00000400214 UBQLN1Q9UMX0 589 aaKnown RBP5.35□□□□□ -1.55
HMGB3P7-201ENST00000400214 PRG3Q9Y2Y8 225 aaPredicted RBP5.35□□□□□ -1.55
HMGB3P7-201ENST00000400214 ANAPC1Q9H1A4 1944 aa5.35□□□□□ -1.55
HMGB3P7-201ENST00000400214 ZDBF2Q9HCK1 2354 aa5.34□□□□□ -1.55
HMGB3P7-201ENST00000400214 GOLGA6L4A6NEF3 574 aa5.34□□□□□ -1.55
HMGB3P7-201ENST00000400214 CASTOR2A6NHX0 329 aa5.34□□□□□ -1.55
HMGB3P7-201ENST00000400214 L7N2F9 121 aa5.34□□□□□ -1.55
HMGB3P7-201ENST00000400214 M0QZQ0 153 aa5.34□□□□□ -1.55
HMGB3P7-201ENST00000400214 PIRO00625 290 aa5.34□□□□□ -1.55
HMGB3P7-201ENST00000400214 PDXKO00764 312 aa5.34□□□□□ -1.55
HMGB3P7-201ENST00000400214 SOCS6O14544 535 aa5.34□□□□□ -1.55
HMGB3P7-201ENST00000400214 PER2O15055 1255 aa5.34□□□□□ -1.55
HMGB3P7-201ENST00000400214 ANGPT2O15123 496 aa5.34□□□□□ -1.55
HMGB3P7-201ENST00000400214 TEX28O15482 410 aa5.34□□□□□ -1.55
HMGB3P7-201ENST00000400214 EXTL3O43909 919 aa5.34□□□□□ -1.55
HMGB3P7-201ENST00000400214 GMFGO60234 142 aa5.34□□□□□ -1.55
HMGB3P7-201ENST00000400214 SLC43A1O75387 559 aa5.34□□□□□ -1.55
HMGB3P7-201ENST00000400214 ERLIN1O75477 346 aa5.34□□□□□ -1.55
HMGB3P7-201ENST00000400214 MTRF1O75570 445 aaKnown RBP5.34□□□□□ -1.55
HMGB3P7-201ENST00000400214 B3GAT3O94766 335 aa5.34□□□□□ -1.55
HMGB3P7-201ENST00000400214 PRSS23O95084 383 aa5.34□□□□□ -1.55
HMGB3P7-201ENST00000400214 PLGP00747 810 aaPredicted RBP5.34□□□□□ -1.55
HMGB3P7-201ENST00000400214 EPORP19235 508 aa5.34□□□□□ -1.55
HMGB3P7-201ENST00000400214 CDH3P22223 829 aa5.34□□□□□ -1.55
HMGB3P7-201ENST00000400214 IGFBP6P24592 240 aaPredicted RBP5.34□□□□□ -1.55
HMGB3P7-201ENST00000400214 SLC6A4P31645 630 aa5.34□□□□□ -1.55
HMGB3P7-201ENST00000400214 CPOXP36551 454 aa5.34□□□□□ -1.55
HMGB3P7-201ENST00000400214 ALDH1A3P47895 512 aa5.34□□□□□ -1.55
HMGB3P7-201ENST00000400214 ACOT2P49753 483 aa5.34□□□□□ -1.55
HMGB3P7-201ENST00000400214 KCNQ1P51787 676 aa5.34□□□□□ -1.55
HMGB3P7-201ENST00000400214 EFNB1P98172 346 aa5.34□□□□□ -1.55
HMGB3P7-201ENST00000400214 CYP4F8P98187 520 aa5.34□□□□□ -1.55
HMGB3P7-201ENST00000400214 ITIH3Q06033 890 aa5.34□□□□□ -1.55
HMGB3P7-201ENST00000400214 GFPT1Q06210 699 aaPredicted RBP5.34□□□□□ -1.55
HMGB3P7-201ENST00000400214 NIPAL4Q0D2K0 466 aa5.34□□□□□ -1.55
HMGB3P7-201ENST00000400214 P3H1Q32P28 736 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms