RNA–Protein interactions for RNA: ENST00000399438.7

TRAPPC13-202, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TRAPPC13, Length 3,221 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-202ENST00000399438 CSTAP01040 98 aa6.16□□□□□ -1.42
TRAPPC13-202ENST00000399438 ITGB3P05106 788 aa6.16□□□□□ -1.42
TRAPPC13-202ENST00000399438 KRT8P05787 483 aa6.16□□□□□ -1.42
TRAPPC13-202ENST00000399438 EPORP19235 508 aa6.16□□□□□ -1.42
TRAPPC13-202ENST00000399438 IGFBP6P24592 240 aaPredicted RBP6.16□□□□□ -1.42
TRAPPC13-202ENST00000399438 NAGLUP54802 743 aa6.16□□□□□ -1.42
TRAPPC13-202ENST00000399438 YBX1P67809 324 aaKnown RBP6.16□□□□□ -1.42
TRAPPC13-202ENST00000399438 ASPHQ12797 758 aa6.16□□□□□ -1.42
TRAPPC13-202ENST00000399438 OVGP1Q12889 678 aa6.16□□□□□ -1.42
TRAPPC13-202ENST00000399438 ALCAMQ13740 583 aa6.16□□□□□ -1.42
TRAPPC13-202ENST00000399438 LPIN1Q14693 890 aa6.16□□□□□ -1.42
TRAPPC13-202ENST00000399438 NFIL3Q16649 462 aa6.16□□□□□ -1.42
TRAPPC13-202ENST00000399438 SGSM1Q2NKQ1 1148 aa6.16□□□□□ -1.42
TRAPPC13-202ENST00000399438 PTPN20Q4JDL3 420 aa6.16□□□□□ -1.42
TRAPPC13-202ENST00000399438 KLHL35Q6PF15 583 aa6.16□□□□□ -1.42
TRAPPC13-202ENST00000399438 VN1R5Q7Z5H4 357 aa6.16□□□□□ -1.42
TRAPPC13-202ENST00000399438 SPATA19Q7Z5L4 167 aa6.16□□□□□ -1.42
TRAPPC13-202ENST00000399438 ABRAQ8N0Z2 381 aa6.16□□□□□ -1.42
TRAPPC13-202ENST00000399438 KDM8Q8N371 416 aa6.16□□□□□ -1.42
TRAPPC13-202ENST00000399438 ARFGAP2Q8N6H7 521 aa6.16□□□□□ -1.42
TRAPPC13-202ENST00000399438 CHMP6Q96FZ7 201 aa6.16□□□□□ -1.42
TRAPPC13-202ENST00000399438 RAX2Q96IS3 184 aa6.16□□□□□ -1.42
TRAPPC13-202ENST00000399438 MCMBPQ9BTE3 642 aa6.16□□□□□ -1.42
TRAPPC13-202ENST00000399438 BTBD2Q9BX70 525 aa6.16□□□□□ -1.42
TRAPPC13-202ENST00000399438 DPH1Q9BZG8 443 aa6.16□□□□□ -1.42
TRAPPC13-202ENST00000399438 IMPG2Q9BZV3 1241 aa6.16□□□□□ -1.42
TRAPPC13-202ENST00000399438 MIS12Q9H081 205 aa6.16□□□□□ -1.42
TRAPPC13-202ENST00000399438 SDCBP2Q9H190 292 aa6.16□□□□□ -1.42
TRAPPC13-202ENST00000399438 LRRC19Q9H756 370 aa6.16□□□□□ -1.42
TRAPPC13-202ENST00000399438 TBC1D13Q9NVG8 400 aa6.16□□□□□ -1.42
TRAPPC13-202ENST00000399438 PNPOQ9NVS9 261 aa6.16□□□□□ -1.42
TRAPPC13-202ENST00000399438 WSB2Q9NYS7 404 aaPredicted RBP6.16□□□□□ -1.42
TRAPPC13-202ENST00000399438 SLC25A10Q9UBX3 287 aaPredicted RBP6.16□□□□□ -1.42
TRAPPC13-202ENST00000399438 STRAPQ9Y3F4 350 aaKnown RBP6.16□□□□□ -1.42
TRAPPC13-202ENST00000399438 CDH23Q9H251 3354 aa6.15□□□□□ -1.42
TRAPPC13-202ENST00000399438 GOLGA8OA6NCC3 632 aa6.15□□□□□ -1.42
TRAPPC13-202ENST00000399438 FAM90A20PA6NIJ5 464 aa6.15□□□□□ -1.42
TRAPPC13-202ENST00000399438 GOLGA8NF8WBI6 632 aa6.15□□□□□ -1.42
TRAPPC13-202ENST00000399438 GPR25O00155 361 aa6.15□□□□□ -1.42
TRAPPC13-202ENST00000399438 PROSCO94903 275 aa6.15□□□□□ -1.42
TRAPPC13-202ENST00000399438 UPP2O95045 317 aa6.15□□□□□ -1.42
TRAPPC13-202ENST00000399438 LYPLA2O95372 231 aa6.15□□□□□ -1.42
TRAPPC13-202ENST00000399438 RETP07949 1114 aa6.15□□□□□ -1.42
TRAPPC13-202ENST00000399438 ACAA1P09110 424 aaPredicted RBP6.15□□□□□ -1.42
TRAPPC13-202ENST00000399438 PABPC4LP0CB38 370 aaKnown RBP6.15□□□□□ -1.42
TRAPPC13-202ENST00000399438 HOXB1P14653 301 aaPredicted RBP6.15□□□□□ -1.42
TRAPPC13-202ENST00000399438 PSMA2P25787 234 aa6.15□□□□□ -1.42
TRAPPC13-202ENST00000399438 MC5RP33032 325 aa6.15□□□□□ -1.42
TRAPPC13-202ENST00000399438 IRX4P78413 519 aa6.15□□□□□ -1.42
TRAPPC13-202ENST00000399438 MALLQ13021 153 aa6.15□□□□□ -1.42
TRAPPC13-202ENST00000399438 AIMP2Q13155 320 aaKnown RBP6.15□□□□□ -1.42
TRAPPC13-202ENST00000399438 MAPRE2Q15555 327 aa6.15□□□□□ -1.42
TRAPPC13-202ENST00000399438 PRAMEF19Q5SWL8 479 aa6.15□□□□□ -1.42
TRAPPC13-202ENST00000399438 THEMIS2Q5TEJ8 643 aa6.15□□□□□ -1.42
TRAPPC13-202ENST00000399438 GKAP1Q5VSY0 366 aaPredicted RBP6.15□□□□□ -1.42
TRAPPC13-202ENST00000399438 BSPRYQ5W0U4 402 aa6.15□□□□□ -1.42
TRAPPC13-202ENST00000399438 EFCAB12Q6NXP0 572 aa6.15□□□□□ -1.42
TRAPPC13-202ENST00000399438 ACTRT2Q8TDY3 377 aa6.15□□□□□ -1.42
TRAPPC13-202ENST00000399438 DNAJA4Q8WW22 397 aaPredicted RBP6.15□□□□□ -1.42
TRAPPC13-202ENST00000399438 SNX27Q96L92 541 aa6.15□□□□□ -1.42
TRAPPC13-202ENST00000399438 CPXM1Q96SM3 734 aa6.15□□□□□ -1.42
TRAPPC13-202ENST00000399438 ZIC5Q96T25 663 aa6.15□□□□□ -1.42
TRAPPC13-202ENST00000399438 ZBTB18Q99592 522 aa6.15□□□□□ -1.42
TRAPPC13-202ENST00000399438 MKRN2Q9H000 416 aaKnown RBP6.15□□□□□ -1.42
TRAPPC13-202ENST00000399438 SPATC1LQ9H0A9 340 aa6.15□□□□□ -1.42
TRAPPC13-202ENST00000399438 DNAJC11Q9NVH1 559 aa6.15□□□□□ -1.42
TRAPPC13-202ENST00000399438 SARDHQ9UL12 918 aa6.15□□□□□ -1.42
TRAPPC13-202ENST00000399438 CDH7Q9ULB5 785 aa6.15□□□□□ -1.42
TRAPPC13-202ENST00000399438 AP4E1Q9UPM8 1137 aa6.15□□□□□ -1.42
TRAPPC13-202ENST00000399438 CSADQ9Y600 493 aa6.15□□□□□ -1.42
TRAPPC13-202ENST00000399438 CNTNAP2Q9UHC6 1331 aa6.15□□□□□ -1.42
TRAPPC13-202ENST00000399438 MCM3APO60318 1980 aa6.15□□□□□ -1.43
TRAPPC13-202ENST00000399438 SLC15A5A6NIM6 579 aa6.15□□□□□ -1.43
TRAPPC13-202ENST00000399438 E9PI62 339 aa6.15□□□□□ -1.43
TRAPPC13-202ENST00000399438 FKTNO75072 461 aa6.15□□□□□ -1.43
TRAPPC13-202ENST00000399438 RASAL1O95294 804 aa6.15□□□□□ -1.43
TRAPPC13-202ENST00000399438 OPN1LWP04000 364 aa6.15□□□□□ -1.43
TRAPPC13-202ENST00000399438 CSF2P04141 144 aa6.15□□□□□ -1.43
TRAPPC13-202ENST00000399438 FHP07954 510 aa6.15□□□□□ -1.43
TRAPPC13-202ENST00000399438 PRPS2P11908 318 aa6.15□□□□□ -1.43
TRAPPC13-202ENST00000399438 KRT15P19012 456 aa6.15□□□□□ -1.43
TRAPPC13-202ENST00000399438 IVDP26440 423 aa6.15□□□□□ -1.43
TRAPPC13-202ENST00000399438 GABRB2P47870 512 aa6.15□□□□□ -1.43
TRAPPC13-202ENST00000399438 KCNJ2P63252 427 aa6.15□□□□□ -1.43
TRAPPC13-202ENST00000399438 FKBP1BP68106 108 aa6.15□□□□□ -1.43
TRAPPC13-202ENST00000399438 SPIBQ01892 262 aa6.15□□□□□ -1.43
TRAPPC13-202ENST00000399438 ZNF273Q14593 569 aa6.15□□□□□ -1.43
TRAPPC13-202ENST00000399438 KIZQ2M2Z5 673 aa6.15□□□□□ -1.43
TRAPPC13-202ENST00000399438 BTBD16Q32M84 506 aa6.15□□□□□ -1.43
TRAPPC13-202ENST00000399438 LRRC23Q53EV4 343 aaPredicted RBP6.15□□□□□ -1.43
TRAPPC13-202ENST00000399438 PPP6R3Q5H9R7 873 aaPredicted RBP6.15□□□□□ -1.43
TRAPPC13-202ENST00000399438 CEP78Q5JTW2 689 aa6.15□□□□□ -1.43
TRAPPC13-202ENST00000399438 CST9LP1Q5W188 147 aa6.15□□□□□ -1.43
TRAPPC13-202ENST00000399438 SYVN1Q86TM6 617 aa6.15□□□□□ -1.43
TRAPPC13-202ENST00000399438 DCBLD1Q8N8Z6 715 aa6.15□□□□□ -1.43
TRAPPC13-202ENST00000399438 SLC17A8Q8NDX2 589 aa6.15□□□□□ -1.43
TRAPPC13-202ENST00000399438 BHLHE23Q8NDY6 225 aa6.15□□□□□ -1.43
TRAPPC13-202ENST00000399438 STEAP2Q8NFT2 490 aa6.15□□□□□ -1.43
TRAPPC13-202ENST00000399438 LRRC8CQ8TDW0 803 aa6.15□□□□□ -1.43
TRAPPC13-202ENST00000399438 ART4Q93070 314 aa6.15□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms