RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 HLA-FP30511 346 aa17.44■□□□□ 0.38
HLA-DQB1-204ENST00000399084 CA8P35219 290 aa17.44■□□□□ 0.38
HLA-DQB1-204ENST00000399084 AQP4P55087 323 aa17.44■□□□□ 0.38
HLA-DQB1-204ENST00000399084 EEFSECP57772 596 aaKnown RBP17.44■□□□□ 0.38
HLA-DQB1-204ENST00000399084 ECT2LQ008S8 904 aa17.44■□□□□ 0.38
HLA-DQB1-204ENST00000399084 FOLH1Q04609 750 aa17.44■□□□□ 0.38
HLA-DQB1-204ENST00000399084 GRM2Q14416 872 aa17.44■□□□□ 0.38
HLA-DQB1-204ENST00000399084 PTPRRQ15256 657 aa17.44■□□□□ 0.38
HLA-DQB1-204ENST00000399084 LRRC36Q1X8D7 754 aa17.44■□□□□ 0.38
HLA-DQB1-204ENST00000399084 VPS26BQ4G0F5 336 aa17.44■□□□□ 0.38
HLA-DQB1-204ENST00000399084 OR52E8Q6IFG1 317 aa17.44■□□□□ 0.38
HLA-DQB1-204ENST00000399084 MILR1Q7Z6M3 343 aa17.44■□□□□ 0.38
HLA-DQB1-204ENST00000399084 SPNS2Q8IVW8 549 aa17.44■□□□□ 0.38
HLA-DQB1-204ENST00000399084 SLC15A3Q8IY34 581 aa17.44■□□□□ 0.38
HLA-DQB1-204ENST00000399084 FAM9CQ8IZT9 166 aa17.44■□□□□ 0.38
HLA-DQB1-204ENST00000399084 DPP10Q8N608 796 aa17.44■□□□□ 0.38
HLA-DQB1-204ENST00000399084 BHMTQ93088 406 aa17.44■□□□□ 0.38
HLA-DQB1-204ENST00000399084 KLHL32Q96NJ5 620 aa17.44■□□□□ 0.38
HLA-DQB1-204ENST00000399084 RWDD3Q9Y3V2 267 aa17.44■□□□□ 0.38
HLA-DQB1-204ENST00000399084 CCDC154A6NI56 674 aa17.44■□□□□ 0.38
HLA-DQB1-204ENST00000399084 IQCF5A8MTL0 148 aa17.44■□□□□ 0.38
HLA-DQB1-204ENST00000399084 SLC9A3R1O14745 358 aaPredicted RBP17.44■□□□□ 0.38
HLA-DQB1-204ENST00000399084 SCAMP3O14828 347 aaKnown RBP17.44■□□□□ 0.38
HLA-DQB1-204ENST00000399084 SYNCRIPO60506 623 aaKnown RBP17.44■□□□□ 0.38
HLA-DQB1-204ENST00000399084 TRIM16O95361 564 aa17.44■□□□□ 0.38
HLA-DQB1-204ENST00000399084 SLC34A2O95436 690 aa17.44■□□□□ 0.38
HLA-DQB1-204ENST00000399084 HNRNPA1P09651 372 aaKnown RBP eCLIP17.44■□□□□ 0.38
HLA-DQB1-204ENST00000399084 EBLN1P0CF75 366 aa17.44■□□□□ 0.38
HLA-DQB1-204ENST00000399084 PABPC1P11940 636 aaKnown RBP17.44■□□□□ 0.38
HLA-DQB1-204ENST00000399084 TCN1P20061 433 aaPredicted RBP17.44■□□□□ 0.38
HLA-DQB1-204ENST00000399084 RECQLP46063 649 aaPredicted RBP17.44■□□□□ 0.38
HLA-DQB1-204ENST00000399084 POLR2JP52435 117 aaKnown RBP17.44■□□□□ 0.38
HLA-DQB1-204ENST00000399084 UBE3AQ05086 875 aa17.44■□□□□ 0.38
HLA-DQB1-204ENST00000399084 INPP5AQ14642 412 aa17.44■□□□□ 0.38
HLA-DQB1-204ENST00000399084 LCN8Q6JVE9 175 aa17.44■□□□□ 0.38
HLA-DQB1-204ENST00000399084 KIAA0907Q7Z7F0 614 aaPredicted RBP17.44■□□□□ 0.38
HLA-DQB1-204ENST00000399084 RAVER1Q8IY67 606 aaKnown RBP17.44■□□□□ 0.38
HLA-DQB1-204ENST00000399084 ST13P4Q8IZP2 240 aaPredicted RBP17.44■□□□□ 0.38
HLA-DQB1-204ENST00000399084 CDYL2Q8N8U2 506 aa17.44■□□□□ 0.38
HLA-DQB1-204ENST00000399084 OR6K2Q8NGY2 324 aa17.44■□□□□ 0.38
HLA-DQB1-204ENST00000399084 IRF7Q92985 503 aa17.44■□□□□ 0.38
HLA-DQB1-204ENST00000399084 ARMC5Q96C12 935 aa17.44■□□□□ 0.38
HLA-DQB1-204ENST00000399084 LRIG1Q96JA1 1093 aa17.44■□□□□ 0.38
HLA-DQB1-204ENST00000399084 TRAPPC9Q96Q05 1148 aa17.44■□□□□ 0.38
HLA-DQB1-204ENST00000399084 C17orf80Q9BSJ5 609 aa17.44■□□□□ 0.38
HLA-DQB1-204ENST00000399084 SLC29A3Q9BZD2 475 aa17.44■□□□□ 0.38
HLA-DQB1-204ENST00000399084 TNKS2Q9H2K2 1166 aa17.44■□□□□ 0.38
HLA-DQB1-204ENST00000399084 IPPKQ9H8X2 491 aa17.44■□□□□ 0.38
HLA-DQB1-204ENST00000399084 COPS7BQ9H9Q2 264 aaPredicted RBP17.44■□□□□ 0.38
HLA-DQB1-204ENST00000399084 TDP1Q9NUW8 608 aa17.44■□□□□ 0.38
HLA-DQB1-204ENST00000399084 SMOXQ9NWM0 555 aa17.44■□□□□ 0.38
HLA-DQB1-204ENST00000399084 PLK2Q9NYY3 685 aa17.44■□□□□ 0.38
HLA-DQB1-204ENST00000399084 PKD2L2Q9NZM6 624 aa17.44■□□□□ 0.38
HLA-DQB1-204ENST00000399084 NFKBIL1Q9UBC1 381 aaPredicted RBP17.44■□□□□ 0.38
HLA-DQB1-204ENST00000399084 OPTCQ9UBM4 332 aa17.44■□□□□ 0.38
HLA-DQB1-204ENST00000399084 TRPS1Q9UHF7 1281 aa17.44■□□□□ 0.38
HLA-DQB1-204ENST00000399084 CLEC4EQ9ULY5 219 aa17.44■□□□□ 0.38
HLA-DQB1-204ENST00000399084 SLC8A2Q9UPR5 921 aa17.44■□□□□ 0.38
HLA-DQB1-204ENST00000399084 ANGPTL3Q9Y5C1 460 aa17.44■□□□□ 0.38
HLA-DQB1-204ENST00000399084 A0A1B0GTL3 188 aa17.43■□□□□ 0.38
HLA-DQB1-204ENST00000399084 NPIPB15A6NHN6 443 aaPredicted RBP17.43■□□□□ 0.38
HLA-DQB1-204ENST00000399084 K7EPI3 171 aa17.43■□□□□ 0.38
HLA-DQB1-204ENST00000399084 QSOX1O00391 747 aa17.43■□□□□ 0.38
HLA-DQB1-204ENST00000399084 OR7A17O14581 309 aa17.43■□□□□ 0.38
HLA-DQB1-204ENST00000399084 SLC16A5O15375 505 aa17.43■□□□□ 0.38
HLA-DQB1-204ENST00000399084 HNRNPRO43390 633 aaKnown RBP17.43■□□□□ 0.38
HLA-DQB1-204ENST00000399084 RGS14O43566 566 aa17.43■□□□□ 0.38
HLA-DQB1-204ENST00000399084 FGBP02675 491 aa17.43■□□□□ 0.38
HLA-DQB1-204ENST00000399084 C8GP07360 202 aa17.43■□□□□ 0.38
HLA-DQB1-204ENST00000399084 POU2F2P09086 479 aa17.43■□□□□ 0.38
HLA-DQB1-204ENST00000399084 UMPSP11172 480 aa17.43■□□□□ 0.38
HLA-DQB1-204ENST00000399084 CYP2A6P11509 494 aaPredicted RBP17.43■□□□□ 0.38
HLA-DQB1-204ENST00000399084 SLC6A2P23975 617 aa17.43■□□□□ 0.38
HLA-DQB1-204ENST00000399084 ITGB8P26012 769 aa17.43■□□□□ 0.38
HLA-DQB1-204ENST00000399084 PRDX3P30048 256 aaKnown RBP17.43■□□□□ 0.38
HLA-DQB1-204ENST00000399084 HMOX2P30519 316 aa17.43■□□□□ 0.38
HLA-DQB1-204ENST00000399084 GGT5P36269 586 aa17.43■□□□□ 0.38
HLA-DQB1-204ENST00000399084 CCNHP51946 323 aaPredicted RBP17.43■□□□□ 0.38
HLA-DQB1-204ENST00000399084 C6orf10Q5SRN2 563 aa17.43■□□□□ 0.38
HLA-DQB1-204ENST00000399084 Q6ZSR9 355 aa17.43■□□□□ 0.38
HLA-DQB1-204ENST00000399084 NECAB2Q7Z6G3 386 aa17.43■□□□□ 0.38
HLA-DQB1-204ENST00000399084 PTRH1Q86Y79 214 aaKnown RBP17.43■□□□□ 0.38
HLA-DQB1-204ENST00000399084 FNDC5Q8NAU1 212 aa17.43■□□□□ 0.38
HLA-DQB1-204ENST00000399084 RHBDF1Q96CC6 855 aa17.43■□□□□ 0.38
HLA-DQB1-204ENST00000399084 TIFAQ96CG3 184 aa17.43■□□□□ 0.38
HLA-DQB1-204ENST00000399084 PAWRQ96IZ0 340 aaKnown RBP17.43■□□□□ 0.38
HLA-DQB1-204ENST00000399084 CCM2LQ9NUG4 571 aaPredicted RBP17.43■□□□□ 0.38
HLA-DQB1-204ENST00000399084 ASIC5Q9NY37 505 aa17.43■□□□□ 0.38
HLA-DQB1-204ENST00000399084 MARK1Q9P0L2 795 aa17.43■□□□□ 0.38
HLA-DQB1-204ENST00000399084 DPP7Q9UHL4 492 aa17.43■□□□□ 0.38
HLA-DQB1-204ENST00000399084 AP3M1Q9Y2T2 418 aa17.43■□□□□ 0.38
HLA-DQB1-204ENST00000399084 PCDHA9Q9Y5H5 950 aa17.43■□□□□ 0.38
HLA-DQB1-204ENST00000399084 SCN8AQ9UQD0 1980 aa17.43■□□□□ 0.38
HLA-DQB1-204ENST00000399084 HELZP42694 1942 aaKnown RBP17.42■□□□□ 0.38
HLA-DQB1-204ENST00000399084 FXYD1O00168 92 aa17.42■□□□□ 0.38
HLA-DQB1-204ENST00000399084 AP2A2O94973 939 aa17.42■□□□□ 0.38
HLA-DQB1-204ENST00000399084 GPIP06744 558 aa17.42■□□□□ 0.38
HLA-DQB1-204ENST00000399084 CAPN1P07384 714 aa17.42■□□□□ 0.38
HLA-DQB1-204ENST00000399084 ANXA5P08758 320 aa17.42■□□□□ 0.38
HLA-DQB1-204ENST00000399084 MPC1LP0DKB6 136 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms