RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 ACVR1CQ8NER5 493 aa12.19□□□□□ -0.46
HLA-DQB1-203ENST00000399082 GIMAP7Q8NHV1 300 aa12.19□□□□□ -0.46
HLA-DQB1-203ENST00000399082 NETO1Q8TDF5 533 aa12.19□□□□□ -0.46
HLA-DQB1-203ENST00000399082 TTC1Q99614 292 aa12.19□□□□□ -0.46
HLA-DQB1-203ENST00000399082 PARD6BQ9BYG5 372 aa12.19□□□□□ -0.46
HLA-DQB1-203ENST00000399082 GSDMCQ9BYG8 508 aa12.19□□□□□ -0.46
HLA-DQB1-203ENST00000399082 TSPYL1Q9H0U9 437 aa12.19□□□□□ -0.46
HLA-DQB1-203ENST00000399082 VPS37BQ9H9H4 285 aa12.19□□□□□ -0.46
HLA-DQB1-203ENST00000399082 SCHIP1Q9P0W5 487 aaPredicted RBP12.19□□□□□ -0.46
HLA-DQB1-203ENST00000399082 GALPQ9UBC7 116 aa12.19□□□□□ -0.46
HLA-DQB1-203ENST00000399082 RABGEF1Q9UJ41 708 aa12.19□□□□□ -0.46
HLA-DQB1-203ENST00000399082 PCOLCE2Q9UKZ9 415 aa12.19□□□□□ -0.46
HLA-DQB1-203ENST00000399082 RAB21Q9UL25 225 aa12.19□□□□□ -0.46
HLA-DQB1-203ENST00000399082 WDR37Q9Y2I8 494 aa12.19□□□□□ -0.46
HLA-DQB1-203ENST00000399082 DNMT3AQ9Y6K1 912 aaPredicted RBP12.19□□□□□ -0.46
HLA-DQB1-203ENST00000399082 C17orf113A0A1B0GUU1 675 aa12.18□□□□□ -0.46
HLA-DQB1-203ENST00000399082 SLC30A4O14863 429 aa12.18□□□□□ -0.46
HLA-DQB1-203ENST00000399082 SIGLEC6O43699 453 aa12.18□□□□□ -0.46
HLA-DQB1-203ENST00000399082 SPAG6O75602 509 aa12.18□□□□□ -0.46
HLA-DQB1-203ENST00000399082 ACSL3O95573 720 aa12.18□□□□□ -0.46
HLA-DQB1-203ENST00000399082 ESR1P03372 595 aa12.18□□□□□ -0.46
HLA-DQB1-203ENST00000399082 ANXA6P08133 673 aa12.18□□□□□ -0.46
HLA-DQB1-203ENST00000399082 PYGBP11216 843 aa12.18□□□□□ -0.46
HLA-DQB1-203ENST00000399082 PKMP14618 531 aaKnown RBP12.18□□□□□ -0.46
HLA-DQB1-203ENST00000399082 ITGB6P18564 788 aa12.18□□□□□ -0.46
HLA-DQB1-203ENST00000399082 GRK6P43250 576 aa12.18□□□□□ -0.46
HLA-DQB1-203ENST00000399082 PGGT1BP53609 377 aa12.18□□□□□ -0.46
HLA-DQB1-203ENST00000399082 UAP1Q16222 522 aaPredicted RBP12.18□□□□□ -0.46
HLA-DQB1-203ENST00000399082 C6orf132Q5T0Z8 1188 aa12.18□□□□□ -0.46
HLA-DQB1-203ENST00000399082 METRNLQ641Q3 311 aa12.18□□□□□ -0.46
HLA-DQB1-203ENST00000399082 OGFOD3Q6PK18 319 aa12.18□□□□□ -0.46
HLA-DQB1-203ENST00000399082 LVRNQ6Q4G3 990 aa12.18□□□□□ -0.46
HLA-DQB1-203ENST00000399082 CEP128Q6ZU80 1094 aa12.18□□□□□ -0.46
HLA-DQB1-203ENST00000399082 SLC26A11Q86WA9 606 aa12.18□□□□□ -0.46
HLA-DQB1-203ENST00000399082 ZC3HC1Q86WB0 502 aaKnown RBP12.18□□□□□ -0.46
HLA-DQB1-203ENST00000399082 GKN2Q86XP6 184 aa12.18□□□□□ -0.46
HLA-DQB1-203ENST00000399082 NAGSQ8N159 534 aa12.18□□□□□ -0.46
HLA-DQB1-203ENST00000399082 SDR16C5Q8N3Y7 309 aa12.18□□□□□ -0.46
HLA-DQB1-203ENST00000399082 KYQ8NBH2 561 aa12.18□□□□□ -0.46
HLA-DQB1-203ENST00000399082 FAM46DQ8NEK8 389 aa12.18□□□□□ -0.46
HLA-DQB1-203ENST00000399082 GPR156Q8NFN8 814 aa12.18□□□□□ -0.46
HLA-DQB1-203ENST00000399082 UHMK1Q8TAS1 419 aaKnown RBP12.18□□□□□ -0.46
HLA-DQB1-203ENST00000399082 HM13Q8TCT9 377 aa12.18□□□□□ -0.46
HLA-DQB1-203ENST00000399082 AENQ8WTP8 325 aaKnown RBP12.18□□□□□ -0.46
HLA-DQB1-203ENST00000399082 SLC30A3Q99726 388 aa12.18□□□□□ -0.46
HLA-DQB1-203ENST00000399082 CCM2Q9BSQ5 444 aa12.18□□□□□ -0.46
HLA-DQB1-203ENST00000399082 AARSD1Q9BTE6 412 aaKnown RBP12.18□□□□□ -0.46
HLA-DQB1-203ENST00000399082 COG4Q9H9E3 785 aa12.18□□□□□ -0.46
HLA-DQB1-203ENST00000399082 PPANQ9NQ55 473 aaKnown RBP12.18□□□□□ -0.46
HLA-DQB1-203ENST00000399082 PRDM8Q9NQV8 689 aa12.18□□□□□ -0.46
HLA-DQB1-203ENST00000399082 ZFATQ9P243 1243 aa12.18□□□□□ -0.46
HLA-DQB1-203ENST00000399082 FAM8A1Q9UBU6 413 aa12.18□□□□□ -0.46
HLA-DQB1-203ENST00000399082 GNPTGQ9UJJ9 305 aa12.18□□□□□ -0.46
HLA-DQB1-203ENST00000399082 CDYLQ9Y232 598 aa12.18□□□□□ -0.46
HLA-DQB1-203ENST00000399082 PCDHB1Q9Y5F3 818 aa12.18□□□□□ -0.46
HLA-DQB1-203ENST00000399082 SLC5A10A0PJK1 596 aa12.17□□□□□ -0.46
HLA-DQB1-203ENST00000399082 NEMP2A6NFY4 417 aa12.17□□□□□ -0.46
HLA-DQB1-203ENST00000399082 B4DGG1 531 aa12.17□□□□□ -0.46
HLA-DQB1-203ENST00000399082 RIPK2O43353 540 aa12.17□□□□□ -0.46
HLA-DQB1-203ENST00000399082 FAM155BO75949 473 aa12.17□□□□□ -0.46
HLA-DQB1-203ENST00000399082 FTH1P02794 183 aa12.17□□□□□ -0.46
HLA-DQB1-203ENST00000399082 OR56A5P0C7T3 313 aa12.17□□□□□ -0.46
HLA-DQB1-203ENST00000399082 AOAHP28039 575 aa12.17□□□□□ -0.46
HLA-DQB1-203ENST00000399082 PDHA2P29803 388 aa12.17□□□□□ -0.46
HLA-DQB1-203ENST00000399082 STX2P32856 288 aa12.17□□□□□ -0.46
HLA-DQB1-203ENST00000399082 PPARGP37231 505 aaPredicted RBP12.17□□□□□ -0.46
HLA-DQB1-203ENST00000399082 PREPP48147 710 aa12.17□□□□□ -0.46
HLA-DQB1-203ENST00000399082 CD151P48509 253 aa12.17□□□□□ -0.46
HLA-DQB1-203ENST00000399082 PMS2P54278 862 aa12.17□□□□□ -0.46
HLA-DQB1-203ENST00000399082 MAZP56270 477 aaKnown RBP12.17□□□□□ -0.46
HLA-DQB1-203ENST00000399082 GBX1Q14549 363 aa12.17□□□□□ -0.46
HLA-DQB1-203ENST00000399082 SLMAPQ14BN4 828 aa12.17□□□□□ -0.46
HLA-DQB1-203ENST00000399082 PTRHD1Q6GMV3 140 aaKnown RBP12.17□□□□□ -0.46
HLA-DQB1-203ENST00000399082 ABRAXAS1Q6UWZ7 409 aa12.17□□□□□ -0.46
HLA-DQB1-203ENST00000399082 WASH2PQ6VEQ5 465 aa12.17□□□□□ -0.46
HLA-DQB1-203ENST00000399082 STRA8Q7Z7C7 330 aa12.17□□□□□ -0.46
HLA-DQB1-203ENST00000399082 VRK3Q8IV63 474 aa12.17□□□□□ -0.46
HLA-DQB1-203ENST00000399082 FAM181AQ8N9Y4 354 aa12.17□□□□□ -0.46
HLA-DQB1-203ENST00000399082 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.17□□□□□ -0.46
HLA-DQB1-203ENST00000399082 FAM136AQ96C01 138 aa12.17□□□□□ -0.46
HLA-DQB1-203ENST00000399082 APOLD1Q96LR9 279 aa12.17□□□□□ -0.46
HLA-DQB1-203ENST00000399082 RMDN2Q96LZ7 410 aa12.17□□□□□ -0.46
HLA-DQB1-203ENST00000399082 NDNQ99608 321 aa12.17□□□□□ -0.46
HLA-DQB1-203ENST00000399082 OSGEPL1Q9H4B0 414 aa12.17□□□□□ -0.46
HLA-DQB1-203ENST00000399082 OCEL1Q9H607 264 aa12.17□□□□□ -0.46
HLA-DQB1-203ENST00000399082 ACSS3Q9H6R3 686 aa12.17□□□□□ -0.46
HLA-DQB1-203ENST00000399082 WASH6PQ9NQA3 447 aa12.17□□□□□ -0.46
HLA-DQB1-203ENST00000399082 SIRPGQ9P1W8 387 aa12.17□□□□□ -0.46
HLA-DQB1-203ENST00000399082 GOLGA4Q13439 2230 aaKnown RBP12.17□□□□□ -0.46
HLA-DQB1-203ENST00000399082 PCNX2A6NKB5 2137 aa12.16□□□□□ -0.46
HLA-DQB1-203ENST00000399082 PRAMEF33A0A0G2JMD5 474 aa12.16□□□□□ -0.46
HLA-DQB1-203ENST00000399082 QSOX1O00391 747 aa12.16□□□□□ -0.46
HLA-DQB1-203ENST00000399082 CASC3O15234 703 aaKnown RBP12.16□□□□□ -0.46
HLA-DQB1-203ENST00000399082 SNX2O60749 519 aa12.16□□□□□ -0.46
HLA-DQB1-203ENST00000399082 KCNJ13O60928 360 aa12.16□□□□□ -0.46
HLA-DQB1-203ENST00000399082 GPC4O75487 556 aa12.16□□□□□ -0.46
HLA-DQB1-203ENST00000399082 TRIM16O95361 564 aa12.16□□□□□ -0.46
HLA-DQB1-203ENST00000399082 ABHD2P08910 425 aa12.16□□□□□ -0.46
HLA-DQB1-203ENST00000399082 F3P13726 295 aa12.16□□□□□ -0.46
HLA-DQB1-203ENST00000399082 RPL10P27635 214 aaKnown RBP12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms