RNA–Protein interactions for RNA: ENST00000398510.7

CHD9-202, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best) BASIC

Gene CHD9, Length 11,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-202ENST00000398510 TBC1D3CQ6IPX1 549 aa2.7□□□□□ -1.98
CHD9-202ENST00000398510 ZNF852Q6ZMS4 543 aa2.7□□□□□ -1.98
CHD9-202ENST00000398510 GPR141Q7Z602 305 aa2.7□□□□□ -1.98
CHD9-202ENST00000398510 CTU1Q7Z7A3 348 aaKnown RBP2.7□□□□□ -1.98
CHD9-202ENST00000398510 RALGPS2Q86X27 583 aaPredicted RBP2.7□□□□□ -1.98
CHD9-202ENST00000398510 RELL1Q8IUW5 271 aa2.7□□□□□ -1.98
CHD9-202ENST00000398510 SCUBE3Q8IX30 993 aa2.7□□□□□ -1.98
CHD9-202ENST00000398510 MICU2Q8IYU8 434 aa2.7□□□□□ -1.98
CHD9-202ENST00000398510 TBC1D3Q8IZP1 549 aaPredicted RBP2.7□□□□□ -1.98
CHD9-202ENST00000398510 SLC35F6Q8N357 371 aa2.7□□□□□ -1.98
CHD9-202ENST00000398510 ATAD1Q8NBU5 361 aa2.7□□□□□ -1.98
CHD9-202ENST00000398510 DOCK8Q8NF50 2099 aa2.7□□□□□ -1.98
CHD9-202ENST00000398510 GIPC3Q8TF64 312 aa2.7□□□□□ -1.98
CHD9-202ENST00000398510 DYNLL2Q96FJ2 89 aa2.7□□□□□ -1.98
CHD9-202ENST00000398510 C16orf58Q96GQ5 468 aa2.7□□□□□ -1.98
CHD9-202ENST00000398510 TBL1XR1Q9BZK7 514 aa2.7□□□□□ -1.98
CHD9-202ENST00000398510 ZCWPW1Q9H0M4 648 aa2.7□□□□□ -1.98
CHD9-202ENST00000398510 KCNK4Q9NYG8 393 aa2.7□□□□□ -1.98
CHD9-202ENST00000398510 TAS2R9Q9NYW1 312 aa2.7□□□□□ -1.98
CHD9-202ENST00000398510 TTC26A0AVF1 554 aa2.7□□□□□ -1.98
CHD9-202ENST00000398510 NDST3O95803 873 aa2.7□□□□□ -1.98
CHD9-202ENST00000398510 PLEKP08567 350 aaPredicted RBP2.7□□□□□ -1.98
CHD9-202ENST00000398510 JMJD7P0C870 316 aa2.7□□□□□ -1.98
CHD9-202ENST00000398510 PTPN1P18031 435 aaKnown RBP2.7□□□□□ -1.98
CHD9-202ENST00000398510 HDCP19113 662 aa2.7□□□□□ -1.98
CHD9-202ENST00000398510 DRD4P21917 467 aa2.7□□□□□ -1.98
CHD9-202ENST00000398510 S100A3P33764 101 aa2.7□□□□□ -1.98
CHD9-202ENST00000398510 PTGER3P43115 390 aa2.7□□□□□ -1.98
CHD9-202ENST00000398510 ARSFP54793 590 aa2.7□□□□□ -1.98
CHD9-202ENST00000398510 RAB15P59190 212 aa2.7□□□□□ -1.98
CHD9-202ENST00000398510 TRAP1Q12931 704 aaKnown RBP2.7□□□□□ -1.98
CHD9-202ENST00000398510 ITGA7Q13683 1181 aa2.7□□□□□ -1.98
CHD9-202ENST00000398510 VGLL4Q14135 290 aa2.7□□□□□ -1.98
CHD9-202ENST00000398510 C20orf194Q5TEA3 1177 aa2.7□□□□□ -1.98
CHD9-202ENST00000398510 METTL2BQ6P1Q9 378 aaKnown RBP2.7□□□□□ -1.98
CHD9-202ENST00000398510 UNC5DQ6UXZ4 953 aa2.7□□□□□ -1.98
CHD9-202ENST00000398510 OR56A1Q8NGH5 318 aa2.7□□□□□ -1.98
CHD9-202ENST00000398510 ELP5Q8TE02 316 aa2.7□□□□□ -1.98
CHD9-202ENST00000398510 ZNF669Q96BR6 464 aaPredicted RBP2.7□□□□□ -1.98
CHD9-202ENST00000398510 NXPE2Q96DL1 559 aa2.7□□□□□ -1.98
CHD9-202ENST00000398510 MFSD14AQ96MC6 490 aa2.7□□□□□ -1.98
CHD9-202ENST00000398510 UNC93B1Q9H1C4 597 aa2.7□□□□□ -1.98
CHD9-202ENST00000398510 ETNK1Q9HBU6 452 aa2.7□□□□□ -1.98
CHD9-202ENST00000398510 PRODH2Q9UF12 536 aa2.7□□□□□ -1.98
CHD9-202ENST00000398510 RBM7Q9Y580 266 aaKnown RBP2.7□□□□□ -1.98
CHD9-202ENST00000398510 PCDHGB6Q9Y5F9 930 aa2.7□□□□□ -1.98
CHD9-202ENST00000398510 NUP210Q8TEM1 1887 aaPredicted RBP2.7□□□□□ -1.98
CHD9-202ENST00000398510 TANC1Q9C0D5 1861 aa2.7□□□□□ -1.98
CHD9-202ENST00000398510 KNTC1P50748 2209 aa2.7□□□□□ -1.98
CHD9-202ENST00000398510 NPIPA5A0A0B4J1W7 369 aa2.7□□□□□ -1.98
CHD9-202ENST00000398510 SLC12A8A0AV02 714 aa2.7□□□□□ -1.98
CHD9-202ENST00000398510 EFCAB10A6NFE3 127 aa2.7□□□□□ -1.98
CHD9-202ENST00000398510 GSG1L2A8MUP6 293 aa2.7□□□□□ -1.98
CHD9-202ENST00000398510 LSM1O15116 133 aaKnown RBP2.7□□□□□ -1.98
CHD9-202ENST00000398510 ALOX15BO15296 676 aa2.7□□□□□ -1.98
CHD9-202ENST00000398510 CSDE1O75534 798 aaKnown RBP2.7□□□□□ -1.98
CHD9-202ENST00000398510 CSPG5O95196 566 aa2.7□□□□□ -1.98
CHD9-202ENST00000398510 FCGR2AP12318 317 aa2.7□□□□□ -1.98
CHD9-202ENST00000398510 PEPDP12955 493 aa2.7□□□□□ -1.98
CHD9-202ENST00000398510 ZNF23P17027 643 aa2.7□□□□□ -1.98
CHD9-202ENST00000398510 DGKEP52429 567 aa2.7□□□□□ -1.98
CHD9-202ENST00000398510 HSD11B2P80365 405 aa2.7□□□□□ -1.98
CHD9-202ENST00000398510 RHAGQ02094 409 aa2.7□□□□□ -1.98
CHD9-202ENST00000398510 FMR1Q06787 632 aaKnown RBP eCLIP2.7□□□□□ -1.98
CHD9-202ENST00000398510 C2orf80Q0P641 193 aa2.7□□□□□ -1.98
CHD9-202ENST00000398510 RIPK1Q13546 671 aa2.7□□□□□ -1.98
CHD9-202ENST00000398510 FAM214AQ32MH5 1076 aa2.7□□□□□ -1.98
CHD9-202ENST00000398510 TCTE1Q5JU00 501 aa2.7□□□□□ -1.98
CHD9-202ENST00000398510 WDR59Q6PJI9 974 aa2.7□□□□□ -1.98
CHD9-202ENST00000398510 ILDR1Q86SU0 546 aaPredicted RBP2.7□□□□□ -1.98
CHD9-202ENST00000398510 STK32AQ8WU08 396 aa2.7□□□□□ -1.98
CHD9-202ENST00000398510 SLC9A6Q92581 669 aa2.7□□□□□ -1.98
CHD9-202ENST00000398510 DGCR14Q96DF8 476 aaKnown RBP2.7□□□□□ -1.98
CHD9-202ENST00000398510 ZNF578Q96N58 590 aaPredicted RBP2.7□□□□□ -1.98
CHD9-202ENST00000398510 ZNF347Q96SE7 839 aa2.7□□□□□ -1.98
CHD9-202ENST00000398510 TRPV4Q9HBA0 871 aa2.7□□□□□ -1.98
CHD9-202ENST00000398510 TMEM5Q9Y2B1 443 aa2.7□□□□□ -1.98
CHD9-202ENST00000398510 PLXNA3P51805 1871 aa2.7□□□□□ -1.98
CHD9-202ENST00000398510 MYO7BQ6PIF6 2116 aa2.7□□□□□ -1.98
CHD9-202ENST00000398510 SIGLEC16A6NMB1 481 aa2.7□□□□□ -1.98
CHD9-202ENST00000398510 MAFO75444 373 aaPredicted RBP2.7□□□□□ -1.98
CHD9-202ENST00000398510 LGR5O75473 907 aa2.7□□□□□ -1.98
CHD9-202ENST00000398510 RENP00797 406 aa2.7□□□□□ -1.98
CHD9-202ENST00000398510 RARGP13631 454 aa2.7□□□□□ -1.98
CHD9-202ENST00000398510 HOXC13P31276 330 aa2.7□□□□□ -1.98
CHD9-202ENST00000398510 TNK2Q07912 1038 aa2.7□□□□□ -1.98
CHD9-202ENST00000398510 SLC9A5Q14940 896 aa2.7□□□□□ -1.98
CHD9-202ENST00000398510 TAF1AQ15573 450 aaPredicted RBP2.7□□□□□ -1.98
CHD9-202ENST00000398510 QPCTQ16769 361 aa2.7□□□□□ -1.98
CHD9-202ENST00000398510 DGUOKQ16854 277 aa2.7□□□□□ -1.98
CHD9-202ENST00000398510 C5orf46Q6UWT4 87 aa2.7□□□□□ -1.98
CHD9-202ENST00000398510 MFSD7Q6UXD7 560 aa2.7□□□□□ -1.98
CHD9-202ENST00000398510 USP51Q70EK9 711 aa2.7□□□□□ -1.98
CHD9-202ENST00000398510 INO80EQ8NBZ0 244 aaPredicted RBP2.7□□□□□ -1.98
CHD9-202ENST00000398510 OR5T3Q8NGG3 340 aa2.7□□□□□ -1.98
CHD9-202ENST00000398510 OR9A4Q8NGU2 314 aa2.7□□□□□ -1.98
CHD9-202ENST00000398510 SLC22A8Q8TCC7 542 aa2.7□□□□□ -1.98
CHD9-202ENST00000398510 RBM4BQ9BQ04 359 aaKnown RBP2.7□□□□□ -1.98
CHD9-202ENST00000398510 RBM4Q9BWF3 364 aaKnown RBP2.7□□□□□ -1.98
CHD9-202ENST00000398510 CADM1Q9BY67 442 aaKnown RBP2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms