RNA–Protein interactions for RNA: ENST00000397545.8

CCDC40-204, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS P3 TSL 5 BASIC

Gene CCDC40, Length 4,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-204ENST00000397545 UMPSP11172 480 aa10.64□□□□□ -0.71
CCDC40-204ENST00000397545 FGF3P11487 239 aaPredicted RBP10.64□□□□□ -0.71
CCDC40-204ENST00000397545 MYCLP1P12525 358 aaPredicted RBP10.64□□□□□ -0.71
CCDC40-204ENST00000397545 POLR2EP19388 210 aaKnown RBP10.64□□□□□ -0.71
CCDC40-204ENST00000397545 EDNRBP24530 442 aa10.64□□□□□ -0.71
CCDC40-204ENST00000397545 BUD31P41223 144 aaPredicted RBP10.64□□□□□ -0.71
CCDC40-204ENST00000397545 RPS24P62847 133 aaKnown RBP10.64□□□□□ -0.71
CCDC40-204ENST00000397545 CYP4F8P98187 520 aa10.64□□□□□ -0.71
CCDC40-204ENST00000397545 TRAP1Q12931 704 aaKnown RBP10.64□□□□□ -0.71
CCDC40-204ENST00000397545 CPTPQ5TA50 214 aa10.64□□□□□ -0.71
CCDC40-204ENST00000397545 FBXO27Q8NI29 283 aa10.64□□□□□ -0.71
CCDC40-204ENST00000397545 PTCD2Q8WV60 388 aaKnown RBP10.64□□□□□ -0.71
CCDC40-204ENST00000397545 PYCR2Q96C36 320 aa10.64□□□□□ -0.71
CCDC40-204ENST00000397545 OLFM1Q99784 485 aa10.64□□□□□ -0.71
CCDC40-204ENST00000397545 MYOCQ99972 504 aa10.64□□□□□ -0.71
CCDC40-204ENST00000397545 RBM4BQ9BQ04 359 aaKnown RBP10.64□□□□□ -0.71
CCDC40-204ENST00000397545 RBM4Q9BWF3 364 aaKnown RBP10.64□□□□□ -0.71
CCDC40-204ENST00000397545 OXCT2Q9BYC2 517 aaPredicted RBP10.64□□□□□ -0.71
CCDC40-204ENST00000397545 PTGFRNQ9P2B2 879 aa10.64□□□□□ -0.71
CCDC40-204ENST00000397545 RAPGEFL1Q9UHV5 662 aa10.64□□□□□ -0.71
CCDC40-204ENST00000397545 KIF13BQ9NQT8 1826 aa10.63□□□□□ -0.71
CCDC40-204ENST00000397545 ARL5CA6NH57 179 aa10.63□□□□□ -0.71
CCDC40-204ENST00000397545 OR2AG2A6NM03 316 aa10.63□□□□□ -0.71
CCDC40-204ENST00000397545 CLDN25C9JDP6 229 aa10.63□□□□□ -0.71
CCDC40-204ENST00000397545 TBX1O43435 398 aa10.63□□□□□ -0.71
CCDC40-204ENST00000397545 FOXD2O60548 495 aaPredicted RBP10.63□□□□□ -0.71
CCDC40-204ENST00000397545 PLOD3O60568 738 aa10.63□□□□□ -0.71
CCDC40-204ENST00000397545 IQCF3P0C7M6 154 aa10.63□□□□□ -0.71
CCDC40-204ENST00000397545 CORO1AP31146 461 aaKnown RBP10.63□□□□□ -0.71
CCDC40-204ENST00000397545 ITGA1P56199 1179 aa10.63□□□□□ -0.71
CCDC40-204ENST00000397545 LRRC73Q5JTD7 316 aa10.63□□□□□ -0.71
CCDC40-204ENST00000397545 SPRYD7Q5W111 196 aa10.63□□□□□ -0.71
CCDC40-204ENST00000397545 GPR153Q6NV75 609 aa10.63□□□□□ -0.71
CCDC40-204ENST00000397545 PDSS2Q86YH6 399 aa10.63□□□□□ -0.71
CCDC40-204ENST00000397545 LIX1Q8N485 282 aa10.63□□□□□ -0.71
CCDC40-204ENST00000397545 PIH1D2Q8WWB5 315 aa10.63□□□□□ -0.71
CCDC40-204ENST00000397545 ASZ1Q8WWH4 475 aa10.63□□□□□ -0.71
CCDC40-204ENST00000397545 STARD8Q92502 1023 aa10.63□□□□□ -0.71
CCDC40-204ENST00000397545 KAT2AQ92830 837 aa10.63□□□□□ -0.71
CCDC40-204ENST00000397545 REPS1Q96D71 796 aa10.63□□□□□ -0.71
CCDC40-204ENST00000397545 MAGEB10Q96LZ2 347 aaPredicted RBP10.63□□□□□ -0.71
CCDC40-204ENST00000397545 GPATCH1Q9BRR8 931 aaKnown RBP10.63□□□□□ -0.71
CCDC40-204ENST00000397545 SOX17Q9H6I2 414 aaPredicted RBP10.63□□□□□ -0.71
CCDC40-204ENST00000397545 MRPL39Q9NYK5 338 aaKnown RBP10.63□□□□□ -0.71
CCDC40-204ENST00000397545 RPS6KB2Q9UBS0 482 aa10.63□□□□□ -0.71
CCDC40-204ENST00000397545 ASF1AQ9Y294 204 aa10.63□□□□□ -0.71
CCDC40-204ENST00000397545 RP1L1Q8IWN7 2480 aaPredicted RBP10.63□□□□□ -0.71
CCDC40-204ENST00000397545 A0A1W2PPW3 197 aa10.63□□□□□ -0.71
CCDC40-204ENST00000397545 CCNKO75909 580 aa10.63□□□□□ -0.71
CCDC40-204ENST00000397545 RPL17P18621 184 aaKnown RBP10.63□□□□□ -0.71
CCDC40-204ENST00000397545 CREB5Q02930 508 aa10.63□□□□□ -0.71
CCDC40-204ENST00000397545 RAET1GQ6H3X3 334 aa10.63□□□□□ -0.71
CCDC40-204ENST00000397545 TMPRSS11BQ86T26 416 aa10.63□□□□□ -0.71
CCDC40-204ENST00000397545 CDH24Q86UP0 819 aa10.63□□□□□ -0.71
CCDC40-204ENST00000397545 P2RY8Q86VZ1 359 aa10.63□□□□□ -0.71
CCDC40-204ENST00000397545 LEMD2Q8NC56 503 aa10.63□□□□□ -0.71
CCDC40-204ENST00000397545 ASB9Q96DX5 294 aa10.63□□□□□ -0.71
CCDC40-204ENST00000397545 ART5Q96L15 291 aa10.63□□□□□ -0.71
CCDC40-204ENST00000397545 RPL10LQ96L21 214 aaKnown RBP10.63□□□□□ -0.71
CCDC40-204ENST00000397545 KCNA7Q96RP8 456 aa10.63□□□□□ -0.71
CCDC40-204ENST00000397545 WDR12Q9GZL7 423 aaKnown RBP10.63□□□□□ -0.71
CCDC40-204ENST00000397545 USP29Q9HBJ7 922 aa10.63□□□□□ -0.71
CCDC40-204ENST00000397545 CRNNQ9UBG3 495 aaPredicted RBP10.63□□□□□ -0.71
CCDC40-204ENST00000397545 CYTH4Q9UIA0 394 aa10.63□□□□□ -0.71
CCDC40-204ENST00000397545 SAMD4AQ9UPU9 718 aaKnown RBP10.63□□□□□ -0.71
CCDC40-204ENST00000397545 LOXHD1Q8IVV2 1947 aa10.63□□□□□ -0.71
CCDC40-204ENST00000397545 SGTAO43765 313 aa10.63□□□□□ -0.71
CCDC40-204ENST00000397545 CYP2A6P11509 494 aaPredicted RBP10.63□□□□□ -0.71
CCDC40-204ENST00000397545 UGT1A1P22309 533 aa10.63□□□□□ -0.71
CCDC40-204ENST00000397545 UGT1A4P22310 534 aa10.63□□□□□ -0.71
CCDC40-204ENST00000397545 UGT1A3P35503 534 aa10.63□□□□□ -0.71
CCDC40-204ENST00000397545 UGT1A5P35504 534 aa10.63□□□□□ -0.71
CCDC40-204ENST00000397545 PBX3P40426 434 aa10.63□□□□□ -0.71
CCDC40-204ENST00000397545 CCR4P51679 360 aa10.63□□□□□ -0.71
CCDC40-204ENST00000397545 YBEYP58557 167 aaPredicted RBP10.63□□□□□ -0.71
CCDC40-204ENST00000397545 ZNF252P-AS1Q0IIN9 211 aa10.63□□□□□ -0.71
CCDC40-204ENST00000397545 PPP1R3AQ16821 1122 aa10.63□□□□□ -0.71
CCDC40-204ENST00000397545 GPAT3Q53EU6 434 aa10.63□□□□□ -0.71
CCDC40-204ENST00000397545 CDC73Q6P1J9 531 aa10.63□□□□□ -0.71
CCDC40-204ENST00000397545 CYP20A1Q6UW02 462 aa10.63□□□□□ -0.71
CCDC40-204ENST00000397545 EPGNQ6UW88 154 aa10.63□□□□□ -0.71
CCDC40-204ENST00000397545 AHI1Q8N157 1196 aa10.63□□□□□ -0.71
CCDC40-204ENST00000397545 ENDOVQ8N8Q3 282 aaKnown RBP10.63□□□□□ -0.71
CCDC40-204ENST00000397545 XAGE5Q8WWM1 108 aa10.63□□□□□ -0.71
CCDC40-204ENST00000397545 SOCS4Q8WXH5 440 aa10.63□□□□□ -0.71
CCDC40-204ENST00000397545 ROPN1LQ96C74 230 aa10.63□□□□□ -0.71
CCDC40-204ENST00000397545 MYO19Q96H55 970 aa10.63□□□□□ -0.71
CCDC40-204ENST00000397545 CD84Q9UIB8 345 aa10.63□□□□□ -0.71
CCDC40-204ENST00000397545 ENTPD4Q9Y227 616 aa10.63□□□□□ -0.71
CCDC40-204ENST00000397545 CCDC182A6NF36 153 aa10.62□□□□□ -0.71
CCDC40-204ENST00000397545 J3KR12 359 aa10.62□□□□□ -0.71
CCDC40-204ENST00000397545 EIF2S1P05198 315 aaKnown RBP10.62□□□□□ -0.71
CCDC40-204ENST00000397545 FMO3P31513 532 aa10.62□□□□□ -0.71
CCDC40-204ENST00000397545 TPTEP56180 551 aa10.62□□□□□ -0.71
CCDC40-204ENST00000397545 GTF2H2Q13888 395 aa10.62□□□□□ -0.71
CCDC40-204ENST00000397545 PABPC1LQ4VXU2 614 aaKnown RBP10.62□□□□□ -0.71
CCDC40-204ENST00000397545 ATXN7L2Q5T6C5 722 aaPredicted RBP10.62□□□□□ -0.71
CCDC40-204ENST00000397545 GTF2H2CQ6P1K8 395 aa10.62□□□□□ -0.71
CCDC40-204ENST00000397545 ZDHHC21Q8IVQ6 265 aa10.62□□□□□ -0.71
CCDC40-204ENST00000397545 PNPLA1Q8N8W4 532 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms