RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 ZIM3Q96PE6 472 aa23.19■■□□□ 1.3
TSPAN4-203ENST00000397397 GPR21Q99679 349 aa23.19■■□□□ 1.3
TSPAN4-203ENST00000397397 OLFM1Q99784 485 aa23.19■■□□□ 1.3
TSPAN4-203ENST00000397397 LRRC61Q9BV99 259 aa23.19■■□□□ 1.3
TSPAN4-203ENST00000397397 GTPBP2Q9BX10 602 aaKnown RBP23.19■■□□□ 1.3
TSPAN4-203ENST00000397397 ROPN1BQ9BZX4 212 aaPredicted RBP23.19■■□□□ 1.3
TSPAN4-203ENST00000397397 GAREM1Q9H706 876 aa23.19■■□□□ 1.3
TSPAN4-203ENST00000397397 ROPN1Q9HAT0 212 aaPredicted RBP23.19■■□□□ 1.3
TSPAN4-203ENST00000397397 SPATS2LQ9NUQ6 558 aaKnown RBP23.19■■□□□ 1.3
TSPAN4-203ENST00000397397 TAS2R13Q9NYV9 303 aa23.19■■□□□ 1.3
TSPAN4-203ENST00000397397 GALPQ9UBC7 116 aa23.19■■□□□ 1.3
TSPAN4-203ENST00000397397 SPASTQ9UBP0 616 aa23.19■■□□□ 1.3
TSPAN4-203ENST00000397397 MED16Q9Y2X0 877 aa23.19■■□□□ 1.3
TSPAN4-203ENST00000397397 KNL1Q8NG31 2342 aa23.18■■□□□ 1.3
TSPAN4-203ENST00000397397 C17orf113A0A1B0GUU1 675 aa23.18■■□□□ 1.3
TSPAN4-203ENST00000397397 DFNA5O60443 496 aa23.18■■□□□ 1.3
TSPAN4-203ENST00000397397 KCNJ13O60928 360 aa23.18■■□□□ 1.3
TSPAN4-203ENST00000397397 CER1O95813 267 aa23.18■■□□□ 1.3
TSPAN4-203ENST00000397397 ZNF806P0C7X5 589 aa23.18■■□□□ 1.3
TSPAN4-203ENST00000397397 FDXRP22570 491 aa23.18■■□□□ 1.3
TSPAN4-203ENST00000397397 CNTFP26441 200 aa23.18■■□□□ 1.3
TSPAN4-203ENST00000397397 CCR7P32248 378 aa23.18■■□□□ 1.3
TSPAN4-203ENST00000397397 RXRGP48443 463 aa23.18■■□□□ 1.3
TSPAN4-203ENST00000397397 SLC12A2P55011 1212 aa23.18■■□□□ 1.3
TSPAN4-203ENST00000397397 POU4F1Q01851 419 aa23.18■■□□□ 1.3
TSPAN4-203ENST00000397397 SPEM2Q0P670 501 aa23.18■■□□□ 1.3
TSPAN4-203ENST00000397397 ILF3Q12906 894 aaKnown RBP eCLIP23.18■■□□□ 1.3
TSPAN4-203ENST00000397397 BOP1Q14137 746 aaKnown RBP23.18■■□□□ 1.3
TSPAN4-203ENST00000397397 NFE2L1Q14494 772 aa23.18■■□□□ 1.3
TSPAN4-203ENST00000397397 USP10Q14694 798 aaKnown RBP23.18■■□□□ 1.3
TSPAN4-203ENST00000397397 TDRPQ86YL5 185 aa23.18■■□□□ 1.3
TSPAN4-203ENST00000397397 CFAP206Q8IYR0 622 aa23.18■■□□□ 1.3
TSPAN4-203ENST00000397397 CCL4L1Q8NHW4 92 aa23.18■■□□□ 1.3
TSPAN4-203ENST00000397397 HM13Q8TCT9 377 aa23.18■■□□□ 1.3
TSPAN4-203ENST00000397397 LMX1AQ8TE12 382 aa23.18■■□□□ 1.3
TSPAN4-203ENST00000397397 GSDMCQ9BYG8 508 aa23.18■■□□□ 1.3
TSPAN4-203ENST00000397397 CAB39LQ9H9S4 337 aa23.18■■□□□ 1.3
TSPAN4-203ENST00000397397 CTNNAL1Q9UBT7 734 aa23.18■■□□□ 1.3
TSPAN4-203ENST00000397397 TBK1Q9UHD2 729 aa23.18■■□□□ 1.3
TSPAN4-203ENST00000397397 A0A1B0GTQ1 180 aa23.17■■□□□ 1.3
TSPAN4-203ENST00000397397 HMX2A2RU54 273 aa23.17■■□□□ 1.3
TSPAN4-203ENST00000397397 KLHL33A6NCF5 533 aa23.17■■□□□ 1.3
TSPAN4-203ENST00000397397 KPNA5O15131 536 aa23.17■■□□□ 1.3
TSPAN4-203ENST00000397397 SDC3O75056 442 aa23.17■■□□□ 1.3
TSPAN4-203ENST00000397397 PIAS2O75928 621 aa23.17■■□□□ 1.3
TSPAN4-203ENST00000397397 KRT37O76014 449 aa23.17■■□□□ 1.3
TSPAN4-203ENST00000397397 CELA2BP08218 269 aaPredicted RBP23.17■■□□□ 1.3
TSPAN4-203ENST00000397397 SNRPAP09012 282 aaKnown RBP23.17■■□□□ 1.3
TSPAN4-203ENST00000397397 AK4P27144 223 aaPredicted RBP23.17■■□□□ 1.3
TSPAN4-203ENST00000397397 AOAHP28039 575 aa23.17■■□□□ 1.3
TSPAN4-203ENST00000397397 CLCN7P51798 805 aa23.17■■□□□ 1.3
TSPAN4-203ENST00000397397 TAS2R39P59534 338 aa23.17■■□□□ 1.3
TSPAN4-203ENST00000397397 TIAL1Q01085 375 aaKnown RBP eCLIP23.17■■□□□ 1.3
TSPAN4-203ENST00000397397 SHBQ15464 509 aa23.17■■□□□ 1.3
TSPAN4-203ENST00000397397 SYTL3Q4VX76 610 aa23.17■■□□□ 1.3
TSPAN4-203ENST00000397397 UGT3A1Q6NUS8 523 aa23.17■■□□□ 1.3
TSPAN4-203ENST00000397397 LRIG3Q6UXM1 1119 aa23.17■■□□□ 1.3
TSPAN4-203ENST00000397397 OTOAQ7RTW8 1153 aa23.17■■□□□ 1.3
TSPAN4-203ENST00000397397 HDXQ7Z353 690 aa23.17■■□□□ 1.3
TSPAN4-203ENST00000397397 PIM3Q86V86 326 aa23.17■■□□□ 1.3
TSPAN4-203ENST00000397397 FSTL5Q8N475 847 aaPredicted RBP23.17■■□□□ 1.3
TSPAN4-203ENST00000397397 SIDT2Q8NBJ9 832 aaKnown RBP23.17■■□□□ 1.3
TSPAN4-203ENST00000397397 GPBAR1Q8TDU6 330 aa23.17■■□□□ 1.3
TSPAN4-203ENST00000397397 TSPAN17Q96FV3 270 aa23.17■■□□□ 1.3
TSPAN4-203ENST00000397397 OSGEPL1Q9H4B0 414 aa23.17■■□□□ 1.3
TSPAN4-203ENST00000397397 IL21RQ9HBE5 538 aa23.17■■□□□ 1.3
TSPAN4-203ENST00000397397 GULP1Q9UBP9 304 aa23.17■■□□□ 1.3
TSPAN4-203ENST00000397397 TRMT6Q9UJA5 497 aaKnown RBP23.17■■□□□ 1.3
TSPAN4-203ENST00000397397 ST14Q9Y5Y6 855 aa23.17■■□□□ 1.3
TSPAN4-203ENST00000397397 ZFC3H1O60293 1989 aaKnown RBP23.17■■□□□ 1.3
TSPAN4-203ENST00000397397 IQANK1A0A1B0GTG1 560 aa23.16■■□□□ 1.3
TSPAN4-203ENST00000397397 CDH16O75309 829 aa23.16■■□□□ 1.3
TSPAN4-203ENST00000397397 ACTR1BP42025 376 aa23.16■■□□□ 1.3
TSPAN4-203ENST00000397397 ATXN3P54252 364 aaPredicted RBP23.16■■□□□ 1.3
TSPAN4-203ENST00000397397 ACTR1AP61163 376 aa23.16■■□□□ 1.3
TSPAN4-203ENST00000397397 IL9RQ01113 521 aa23.16■■□□□ 1.3
TSPAN4-203ENST00000397397 ZNF844Q08AG5 666 aa23.16■■□□□ 1.3
TSPAN4-203ENST00000397397 DMPKQ09013 629 aa23.16■■□□□ 1.3
TSPAN4-203ENST00000397397 BNIP3Q12983 259 aa23.16■■□□□ 1.3
TSPAN4-203ENST00000397397 PDAP1Q13442 181 aaKnown RBP23.16■■□□□ 1.3
TSPAN4-203ENST00000397397 TMED2Q15363 201 aa23.16■■□□□ 1.3
TSPAN4-203ENST00000397397 ELOCQ15369 112 aa23.16■■□□□ 1.3
TSPAN4-203ENST00000397397 SF3A2Q15428 464 aaKnown RBP23.16■■□□□ 1.3
TSPAN4-203ENST00000397397 FAM83HQ6ZRV2 1179 aaPredicted RBP23.16■■□□□ 1.3
TSPAN4-203ENST00000397397 TAF8Q7Z7C8 310 aa23.16■■□□□ 1.3
TSPAN4-203ENST00000397397 NRROSQ86YC3 692 aa23.16■■□□□ 1.3
TSPAN4-203ENST00000397397 ZBTB2Q8N680 514 aa23.16■■□□□ 1.3
TSPAN4-203ENST00000397397 ZNF548Q8NEK5 533 aaPredicted RBP23.16■■□□□ 1.3
TSPAN4-203ENST00000397397 OR2I1PQ8NGU4 316 aa23.16■■□□□ 1.3
TSPAN4-203ENST00000397397 INPP5DQ92835 1189 aa23.16■■□□□ 1.3
TSPAN4-203ENST00000397397 SLC30A3Q99726 388 aa23.16■■□□□ 1.3
TSPAN4-203ENST00000397397 TMEM109Q9BVC6 243 aa23.16■■□□□ 1.3
TSPAN4-203ENST00000397397 COG4Q9H9E3 785 aa23.16■■□□□ 1.3
TSPAN4-203ENST00000397397 LATS2Q9NRM7 1088 aa23.16■■□□□ 1.3
TSPAN4-203ENST00000397397 DHRS7Q9Y394 339 aa23.16■■□□□ 1.3
TSPAN4-203ENST00000397397 TRIM49D1C9J1S8 452 aa23.16■■□□□ 1.3
TSPAN4-203ENST00000397397 LIN7AO14910 233 aaPredicted RBP23.16■■□□□ 1.3
TSPAN4-203ENST00000397397 YKT6O15498 198 aa23.16■■□□□ 1.3
TSPAN4-203ENST00000397397 AQP9O43315 295 aa23.16■■□□□ 1.3
TSPAN4-203ENST00000397397 APOA4P06727 396 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms