RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 FMO4P31512 558 aa13.07□□□□□ -0.32
SEC13-209ENST00000397117 EIF2S3P41091 472 aaKnown RBP13.07□□□□□ -0.32
SEC13-209ENST00000397117 C21orf59P57076 290 aa13.07□□□□□ -0.32
SEC13-209ENST00000397117 RPS21P63220 83 aaKnown RBP13.07□□□□□ -0.32
SEC13-209ENST00000397117 C19orf57Q0VDD7 668 aa13.07□□□□□ -0.32
SEC13-209ENST00000397117 DBN1Q16643 649 aa13.07□□□□□ -0.32
SEC13-209ENST00000397117 HENMT1Q5T8I9 393 aaKnown RBP13.07□□□□□ -0.32
SEC13-209ENST00000397117 FAM45BPQ6NSW5 357 aa13.07□□□□□ -0.32
SEC13-209ENST00000397117 ZNF765Q7L2R6 523 aa13.07□□□□□ -0.32
SEC13-209ENST00000397117 RBFAQ8N0V3 343 aa13.07□□□□□ -0.32
SEC13-209ENST00000397117 GDAP1Q8TB36 358 aa13.07□□□□□ -0.32
SEC13-209ENST00000397117 FAM45AQ8TCE6 357 aa13.07□□□□□ -0.32
SEC13-209ENST00000397117 SAP25Q8TEE9 199 aa13.07□□□□□ -0.32
SEC13-209ENST00000397117 TSPAN17Q96FV3 270 aa13.07□□□□□ -0.32
SEC13-209ENST00000397117 CABS1Q96KC9 395 aa13.07□□□□□ -0.32
SEC13-209ENST00000397117 SLC6A18Q96N87 628 aa13.07□□□□□ -0.32
SEC13-209ENST00000397117 ELF4Q99607 663 aaPredicted RBP13.07□□□□□ -0.32
SEC13-209ENST00000397117 NDNQ99608 321 aa13.07□□□□□ -0.32
SEC13-209ENST00000397117 CLPBQ9H078 707 aa13.07□□□□□ -0.32
SEC13-209ENST00000397117 IQCGQ9H095 443 aaKnown RBP13.07□□□□□ -0.32
SEC13-209ENST00000397117 CNOT10Q9H9A5 744 aaKnown RBP13.07□□□□□ -0.32
SEC13-209ENST00000397117 CAB39LQ9H9S4 337 aa13.07□□□□□ -0.32
SEC13-209ENST00000397117 SSU72Q9NP77 194 aaKnown RBP13.07□□□□□ -0.32
SEC13-209ENST00000397117 PCMTD2Q9NV79 361 aa13.07□□□□□ -0.32
SEC13-209ENST00000397117 TLK1Q9UKI8 766 aa13.07□□□□□ -0.32
SEC13-209ENST00000397117 VWA7Q9Y334 891 aa13.07□□□□□ -0.32
SEC13-209ENST00000397117 TBC1D3DA0A087WVF3 549 aa13.06□□□□□ -0.32
SEC13-209ENST00000397117 TBC1D3IA0A087WXS9 549 aa13.06□□□□□ -0.32
SEC13-209ENST00000397117 TBC1D3EA0A087X179 549 aa13.06□□□□□ -0.32
SEC13-209ENST00000397117 TBC1D3KA0A087X1G2 549 aa13.06□□□□□ -0.32
SEC13-209ENST00000397117 TBC1D3FA6NER0 549 aaPredicted RBP13.06□□□□□ -0.32
SEC13-209ENST00000397117 TBC1D3LB9A6J9 549 aa13.06□□□□□ -0.32
SEC13-209ENST00000397117 COPEO14579 308 aa13.06□□□□□ -0.32
SEC13-209ENST00000397117 PRMT5O14744 637 aaPredicted RBP13.06□□□□□ -0.32
SEC13-209ENST00000397117 ATXN7O15265 892 aaPredicted RBP13.06□□□□□ -0.32
SEC13-209ENST00000397117 OR1I1O60431 355 aa13.06□□□□□ -0.32
SEC13-209ENST00000397117 LDOC1O95751 146 aaPredicted RBP13.06□□□□□ -0.32
SEC13-209ENST00000397117 TBC1D3HP0C7X1 549 aa13.06□□□□□ -0.32
SEC13-209ENST00000397117 CDK4P11802 303 aa13.06□□□□□ -0.32
SEC13-209ENST00000397117 CREB1P16220 341 aa13.06□□□□□ -0.32
SEC13-209ENST00000397117 GM2AP17900 193 aa13.06□□□□□ -0.32
SEC13-209ENST00000397117 CRABP2P29373 138 aa13.06□□□□□ -0.32
SEC13-209ENST00000397117 CCT5P48643 541 aa13.06□□□□□ -0.32
SEC13-209ENST00000397117 ADPRHP54922 357 aa13.06□□□□□ -0.32
SEC13-209ENST00000397117 CLDN6P56747 220 aa13.06□□□□□ -0.32
SEC13-209ENST00000397117 SGCGQ13326 291 aa13.06□□□□□ -0.32
SEC13-209ENST00000397117 SEPT7Q16181 437 aaKnown RBP13.06□□□□□ -0.32
SEC13-209ENST00000397117 TAF1BQ53T94 588 aaPredicted RBP13.06□□□□□ -0.32
SEC13-209ENST00000397117 RBM20Q5T481 1227 aaKnown RBP13.06□□□□□ -0.32
SEC13-209ENST00000397117 HECTD2Q5U5R9 776 aa13.06□□□□□ -0.32
SEC13-209ENST00000397117 TBC1D3GQ6DHY5 549 aa13.06□□□□□ -0.32
SEC13-209ENST00000397117 TBC1D3CQ6IPX1 549 aa13.06□□□□□ -0.32
SEC13-209ENST00000397117 KIAA1161Q6NSJ0 714 aa13.06□□□□□ -0.32
SEC13-209ENST00000397117 CMC1Q7Z7K0 106 aa13.06□□□□□ -0.32
SEC13-209ENST00000397117 TBC1D3Q8IZP1 549 aaPredicted RBP13.06□□□□□ -0.32
SEC13-209ENST00000397117 SLC39A7Q92504 469 aa13.06□□□□□ -0.32
SEC13-209ENST00000397117 ISL2Q96A47 359 aa13.06□□□□□ -0.32
SEC13-209ENST00000397117 FAM131CQ96AQ9 280 aa13.06□□□□□ -0.32
SEC13-209ENST00000397117 NXPE2Q96DL1 559 aa13.06□□□□□ -0.32
SEC13-209ENST00000397117 CNDP2Q96KP4 475 aaKnown RBP13.06□□□□□ -0.32
SEC13-209ENST00000397117 COPS8Q99627 209 aa13.06□□□□□ -0.32
SEC13-209ENST00000397117 SLC13A1Q9BZW2 595 aa13.06□□□□□ -0.32
SEC13-209ENST00000397117 VPS11Q9H270 941 aa13.06□□□□□ -0.32
SEC13-209ENST00000397117 PREBQ9HCU5 417 aa13.06□□□□□ -0.32
SEC13-209ENST00000397117 ZDHHC3Q9NYG2 299 aa13.06□□□□□ -0.32
SEC13-209ENST00000397117 NKIRAS1Q9NYS0 192 aa13.06□□□□□ -0.32
SEC13-209ENST00000397117 COMMD10Q9Y6G5 202 aa13.06□□□□□ -0.32
SEC13-209ENST00000397117 A0A096LPK6 155 aa13.06□□□□□ -0.32
SEC13-209ENST00000397117 A0A1W2PR77 199 aa13.06□□□□□ -0.32
SEC13-209ENST00000397117 TMEM120BA0PK00 339 aa13.06□□□□□ -0.32
SEC13-209ENST00000397117 FAM47DPA6NHR8 397 aa13.06□□□□□ -0.32
SEC13-209ENST00000397117 AGAP14A8MT82 685 aa13.06□□□□□ -0.32
SEC13-209ENST00000397117 PRPF4O43172 522 aaKnown RBP eCLIP13.06□□□□□ -0.32
SEC13-209ENST00000397117 RFPL3O75679 317 aa13.06□□□□□ -0.32
SEC13-209ENST00000397117 ESR1P03372 595 aa13.06□□□□□ -0.32
SEC13-209ENST00000397117 ACADVLP49748 655 aa13.06□□□□□ -0.32
SEC13-209ENST00000397117 ATP1A2P50993 1020 aa13.06□□□□□ -0.32
SEC13-209ENST00000397117 ADARP55265 1226 aaKnown RBP13.06□□□□□ -0.32
SEC13-209ENST00000397117 TAS2R39P59534 338 aa13.06□□□□□ -0.32
SEC13-209ENST00000397117 RAB10P61026 200 aa13.06□□□□□ -0.32
SEC13-209ENST00000397117 SLC18A2Q05940 514 aa13.06□□□□□ -0.32
SEC13-209ENST00000397117 ITIH4Q14624 930 aa13.06□□□□□ -0.32
SEC13-209ENST00000397117 RTP5Q14D33 572 aa13.06□□□□□ -0.32
SEC13-209ENST00000397117 RAET1GQ6H3X3 334 aa13.06□□□□□ -0.32
SEC13-209ENST00000397117 KDM7AQ6ZMT4 941 aa13.06□□□□□ -0.32
SEC13-209ENST00000397117 BANPQ8N9N5 519 aa13.06□□□□□ -0.32
SEC13-209ENST00000397117 LSM14AQ8ND56 463 aaKnown RBP13.06□□□□□ -0.32
SEC13-209ENST00000397117 ACVR1CQ8NER5 493 aa13.06□□□□□ -0.32
SEC13-209ENST00000397117 COL26A1Q96A83 441 aa13.06□□□□□ -0.32
SEC13-209ENST00000397117 DCUN1D1Q96GG9 259 aa13.06□□□□□ -0.32
SEC13-209ENST00000397117 APOPT1Q96IL0 206 aa13.06□□□□□ -0.32
SEC13-209ENST00000397117 TSNARE1Q96NA8 513 aa13.06□□□□□ -0.32
SEC13-209ENST00000397117 AARSD1Q9BTE6 412 aaKnown RBP13.06□□□□□ -0.32
SEC13-209ENST00000397117 KDM4CQ9H3R0 1056 aa13.06□□□□□ -0.32
SEC13-209ENST00000397117 SMOXQ9NWM0 555 aa13.06□□□□□ -0.32
SEC13-209ENST00000397117 GNPTGQ9UJJ9 305 aa13.06□□□□□ -0.32
SEC13-209ENST00000397117 PCDHB1Q9Y5F3 818 aa13.06□□□□□ -0.32
SEC13-209ENST00000397117 SCN8AQ9UQD0 1980 aa13.05□□□□□ -0.32
SEC13-209ENST00000397117 A0A1W2PQU0 124 aa13.05□□□□□ -0.32
SEC13-209ENST00000397117 LRRC72A6NJI9 287 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms