RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 KCNAB2Q13303 367 aa13.74□□□□□ -0.21
NUP98-204ENST00000397004 PTGR1Q14914 329 aa13.74□□□□□ -0.21
NUP98-204ENST00000397004 OXA1LQ15070 435 aa13.74□□□□□ -0.21
NUP98-204ENST00000397004 OVOS1Q6IE37 1185 aa13.74□□□□□ -0.21
NUP98-204ENST00000397004 TXNDC11Q6PKC3 985 aa13.74□□□□□ -0.21
NUP98-204ENST00000397004 THAP5Q7Z6K1 395 aa13.74□□□□□ -0.21
NUP98-204ENST00000397004 PARP8Q8N3A8 854 aa13.74□□□□□ -0.21
NUP98-204ENST00000397004 FBXO30Q8TB52 745 aa13.74□□□□□ -0.21
NUP98-204ENST00000397004 EXOC2Q96KP1 924 aa13.74□□□□□ -0.21
NUP98-204ENST00000397004 CGREF1Q99674 301 aa13.74□□□□□ -0.21
NUP98-204ENST00000397004 ZNF408Q9H9D4 720 aa13.74□□□□□ -0.21
NUP98-204ENST00000397004 GNPTGQ9UJJ9 305 aa13.74□□□□□ -0.21
NUP98-204ENST00000397004 USP34Q70CQ2 3546 aa13.74□□□□□ -0.21
NUP98-204ENST00000397004 OR7A17O14581 309 aa13.74□□□□□ -0.21
NUP98-204ENST00000397004 XPNPEP2O43895 674 aa13.74□□□□□ -0.21
NUP98-204ENST00000397004 ABRAXAS2Q15018 415 aa13.74□□□□□ -0.21
NUP98-204ENST00000397004 BROXQ5VW32 411 aa13.74□□□□□ -0.21
NUP98-204ENST00000397004 SCN4BQ8IWT1 228 aa13.74□□□□□ -0.21
NUP98-204ENST00000397004 CFAP52Q8N1V2 620 aa13.74□□□□□ -0.21
NUP98-204ENST00000397004 OR4K2Q8NGD2 314 aa13.74□□□□□ -0.21
NUP98-204ENST00000397004 FATE1Q969F0 183 aa13.74□□□□□ -0.21
NUP98-204ENST00000397004 MUL1Q969V5 352 aa13.74□□□□□ -0.21
NUP98-204ENST00000397004 POPDC3Q9HBV1 291 aa13.74□□□□□ -0.21
NUP98-204ENST00000397004 SACM1LQ9NTJ5 587 aa13.74□□□□□ -0.21
NUP98-204ENST00000397004 CHD5Q8TDI0 1954 aa13.74□□□□□ -0.21
NUP98-204ENST00000397004 TDRD15B5MCY1 1934 aaKnown RBP13.74□□□□□ -0.21
NUP98-204ENST00000397004 TRIM43BA6NCK2 446 aa13.74□□□□□ -0.21
NUP98-204ENST00000397004 HMBSP08397 361 aa13.74□□□□□ -0.21
NUP98-204ENST00000397004 GRIK2Q13002 908 aa13.74□□□□□ -0.21
NUP98-204ENST00000397004 SPATS1Q496A3 300 aa13.74□□□□□ -0.21
NUP98-204ENST00000397004 CLEC4FQ8N1N0 589 aa13.74□□□□□ -0.21
NUP98-204ENST00000397004 PJA1Q8NG27 643 aa13.74□□□□□ -0.21
NUP98-204ENST00000397004 CD200R1Q8TD46 325 aa13.74□□□□□ -0.21
NUP98-204ENST00000397004 OSCP1Q8WVF1 389 aa13.74□□□□□ -0.21
NUP98-204ENST00000397004 PPP1R2P1Q96PQ5 205 aa13.74□□□□□ -0.21
NUP98-204ENST00000397004 MUC13Q9H3R2 512 aa13.74□□□□□ -0.21
NUP98-204ENST00000397004 FARSBQ9NSD9 589 aaKnown RBP13.74□□□□□ -0.21
NUP98-204ENST00000397004 CFAP99D6REC4 459 aa13.73□□□□□ -0.21
NUP98-204ENST00000397004 TSPAN3O60637 253 aa13.73□□□□□ -0.21
NUP98-204ENST00000397004 SNX2O60749 519 aa13.73□□□□□ -0.21
NUP98-204ENST00000397004 CNPP09543 421 aaKnown RBP13.73□□□□□ -0.21
NUP98-204ENST00000397004 ALDH4A1P30038 563 aa13.73□□□□□ -0.21
NUP98-204ENST00000397004 PURAQ00577 322 aaKnown RBP13.73□□□□□ -0.21
NUP98-204ENST00000397004 LAPTM4AQ15012 233 aa13.73□□□□□ -0.21
NUP98-204ENST00000397004 ADPRMQ3LIE5 342 aa13.73□□□□□ -0.21
NUP98-204ENST00000397004 RAB44Q7Z6P3 723 aaPredicted RBP13.73□□□□□ -0.21
NUP98-204ENST00000397004 MIB1Q86YT6 1006 aa13.73□□□□□ -0.21
NUP98-204ENST00000397004 LRRC49Q8IUZ0 686 aa13.73□□□□□ -0.21
NUP98-204ENST00000397004 CADM3Q8N126 398 aa13.73□□□□□ -0.21
NUP98-204ENST00000397004 CNIH3Q8TBE1 160 aa13.73□□□□□ -0.21
NUP98-204ENST00000397004 RAB2BQ8WUD1 216 aa13.73□□□□□ -0.21
NUP98-204ENST00000397004 AKIP1Q9NQ31 210 aa13.73□□□□□ -0.21
NUP98-204ENST00000397004 MITFO75030 526 aaPredicted RBP13.73□□□□□ -0.21
NUP98-204ENST00000397004 RAP2AP10114 183 aa13.73□□□□□ -0.21
NUP98-204ENST00000397004 HPCAL1P37235 193 aa13.73□□□□□ -0.21
NUP98-204ENST00000397004 EFEMP1Q12805 493 aa13.73□□□□□ -0.21
NUP98-204ENST00000397004 GPR162Q16538 588 aa13.73□□□□□ -0.21
NUP98-204ENST00000397004 PTPRNQ16849 979 aa13.73□□□□□ -0.21
NUP98-204ENST00000397004 SLC39A12Q504Y0 691 aa13.73□□□□□ -0.21
NUP98-204ENST00000397004 MRNIPQ6NTE8 343 aa13.73□□□□□ -0.21
NUP98-204ENST00000397004 NIPAL1Q6NVV3 410 aa13.73□□□□□ -0.21
NUP98-204ENST00000397004 CYP20A1Q6UW02 462 aa13.73□□□□□ -0.21
NUP98-204ENST00000397004 ZNF548Q8NEK5 533 aaPredicted RBP13.73□□□□□ -0.21
NUP98-204ENST00000397004 NDNFQ8TB73 568 aa13.73□□□□□ -0.21
NUP98-204ENST00000397004 ITFG1Q8TB96 612 aa13.73□□□□□ -0.21
NUP98-204ENST00000397004 FIG4Q92562 907 aa13.73□□□□□ -0.21
NUP98-204ENST00000397004 C8orf4Q9NR00 106 aa13.73□□□□□ -0.21
NUP98-204ENST00000397004 ZIM2Q9NZV7 527 aa13.73□□□□□ -0.21
NUP98-204ENST00000397004 NAALAD2Q9Y3Q0 740 aa13.73□□□□□ -0.21
NUP98-204ENST00000397004 MRPS6P82932 125 aaKnown RBP13.73□□□□□ -0.21
NUP98-204ENST00000397004 PERM1Q5SV97 790 aa13.73□□□□□ -0.21
NUP98-204ENST00000397004 CRTC3Q6UUV7 619 aa13.73□□□□□ -0.21
NUP98-204ENST00000397004 ZNF551Q7Z340 670 aaPredicted RBP13.73□□□□□ -0.21
NUP98-204ENST00000397004 PROSER1Q86XN7 944 aa13.73□□□□□ -0.21
NUP98-204ENST00000397004 PHACTR4Q8IZ21 702 aa13.73□□□□□ -0.21
NUP98-204ENST00000397004 OR10A6Q8NH74 314 aa13.73□□□□□ -0.21
NUP98-204ENST00000397004 PNPT1Q8TCS8 783 aaKnown RBP13.73□□□□□ -0.21
NUP98-204ENST00000397004 SDCCAG3Q96C92 435 aa13.73□□□□□ -0.21
NUP98-204ENST00000397004 ABI2Q9NYB9 513 aaPredicted RBP13.73□□□□□ -0.21
NUP98-204ENST00000397004 MKI67P46013 3256 aaKnown RBP13.73□□□□□ -0.21
NUP98-204ENST00000397004 PTGES3LE9PB15 166 aa13.72□□□□□ -0.21
NUP98-204ENST00000397004 G3V2T6 193 aa13.72□□□□□ -0.21
NUP98-204ENST00000397004 UGT2B4P06133 528 aa13.72□□□□□ -0.21
NUP98-204ENST00000397004 CAPN1P07384 714 aa13.72□□□□□ -0.21
NUP98-204ENST00000397004 RPL9P32969 192 aaKnown RBP13.72□□□□□ -0.21
NUP98-204ENST00000397004 PIK3CGP48736 1102 aa13.72□□□□□ -0.21
NUP98-204ENST00000397004 TBX4P57082 545 aa13.72□□□□□ -0.21
NUP98-204ENST00000397004 RPS3AP61247 264 aaKnown RBP13.72□□□□□ -0.21
NUP98-204ENST00000397004 YWHAHQ04917 246 aaPredicted RBP13.72□□□□□ -0.21
NUP98-204ENST00000397004 SKIV2LQ15477 1246 aaKnown RBP13.72□□□□□ -0.21
NUP98-204ENST00000397004 RBBP7Q16576 425 aa13.72□□□□□ -0.21
NUP98-204ENST00000397004 GDF6Q6KF10 455 aaPredicted RBP13.72□□□□□ -0.21
NUP98-204ENST00000397004 ING2Q9H160 280 aa13.72□□□□□ -0.21
NUP98-204ENST00000397004 PRDM8Q9NQV8 689 aa13.72□□□□□ -0.21
NUP98-204ENST00000397004 HEBP1Q9NRV9 189 aa13.72□□□□□ -0.21
NUP98-204ENST00000397004 PLXNA3P51805 1871 aa13.72□□□□□ -0.21
NUP98-204ENST00000397004 TNPO2O14787 897 aaKnown RBP13.72□□□□□ -0.21
NUP98-204ENST00000397004 UGT2B11O75310 529 aa13.72□□□□□ -0.21
NUP98-204ENST00000397004 PRAMEF12O95522 483 aa13.72□□□□□ -0.21
NUP98-204ENST00000397004 CDH3P22223 829 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms