RNA–Protein interactions for RNA: ENST00000396366.6

FXN-203, Transcript of frataxin, humanhuman

TSL 2 BASIC

Gene FXN, Length 922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-203ENST00000396366 ZNF28P17035 718 aa17.92■□□□□ 0.46
FXN-203ENST00000396366 CAPZBP47756 277 aa17.92■□□□□ 0.46
FXN-203ENST00000396366 CDKN1CP49918 316 aaPredicted RBP17.92■□□□□ 0.46
FXN-203ENST00000396366 ZNF140P52738 457 aaPredicted RBP17.92■□□□□ 0.46
FXN-203ENST00000396366 KLF1Q13351 362 aaPredicted RBP17.92■□□□□ 0.46
FXN-203ENST00000396366 IRGCQ6NXR0 463 aa17.92■□□□□ 0.46
FXN-203ENST00000396366 DUS1LQ6P1R4 473 aaKnown RBP17.92■□□□□ 0.46
FXN-203ENST00000396366 NLGN4XQ8N0W4 816 aa17.92■□□□□ 0.46
FXN-203ENST00000396366 LILRA3Q8N6C8 439 aaPredicted RBP17.92■□□□□ 0.46
FXN-203ENST00000396366 UBL4BQ8N7F7 174 aa17.92■□□□□ 0.46
FXN-203ENST00000396366 SPDYE1Q8NFV5 336 aaPredicted RBP17.92■□□□□ 0.46
FXN-203ENST00000396366 NLGN4YQ8NFZ3 816 aaPredicted RBP17.92■□□□□ 0.46
FXN-203ENST00000396366 ELMO2Q96JJ3 720 aa17.92■□□□□ 0.46
FXN-203ENST00000396366 ARHGAP9Q9BRR9 750 aa17.92■□□□□ 0.46
FXN-203ENST00000396366 WWP1Q9H0M0 922 aa17.92■□□□□ 0.46
FXN-203ENST00000396366 ARNT2Q9HBZ2 717 aa17.92■□□□□ 0.46
FXN-203ENST00000396366 PIH1D1Q9NWS0 290 aaKnown RBP17.92■□□□□ 0.46
FXN-203ENST00000396366 CAPN6Q9Y6Q1 641 aa17.92■□□□□ 0.46
FXN-203ENST00000396366 MGAT4DA6NG13 374 aa17.91■□□□□ 0.46
FXN-203ENST00000396366 AGAP14A8MT82 685 aa17.91■□□□□ 0.46
FXN-203ENST00000396366 POLBP06746 335 aa17.91■□□□□ 0.46
FXN-203ENST00000396366 PRSS56P0CW18 603 aa17.91■□□□□ 0.46
FXN-203ENST00000396366 LONRF2Q1L5Z9 754 aa17.91■□□□□ 0.46
FXN-203ENST00000396366 PARP6Q2NL67 630 aa17.91■□□□□ 0.46
FXN-203ENST00000396366 CACHD1Q5VU97 1274 aa17.91■□□□□ 0.46
FXN-203ENST00000396366 KCTD11Q693B1 232 aa17.91■□□□□ 0.46
FXN-203ENST00000396366 ARHGEF18Q6ZSZ5 1173 aa17.91■□□□□ 0.46
FXN-203ENST00000396366 RBM12BQ8IXT5 1001 aaKnown RBP17.91■□□□□ 0.46
FXN-203ENST00000396366 KLHDC8BQ8IXV7 354 aa17.91■□□□□ 0.46
FXN-203ENST00000396366 SYCE1Q8N0S2 351 aa17.91■□□□□ 0.46
FXN-203ENST00000396366 OR6C1Q96RD1 312 aa17.91■□□□□ 0.46
FXN-203ENST00000396366 TMEM121Q9BTD3 319 aa17.91■□□□□ 0.46
FXN-203ENST00000396366 ZNF768Q9H5H4 540 aaKnown RBP17.91■□□□□ 0.46
FXN-203ENST00000396366 IMP3Q9NV31 184 aaKnown RBP17.91■□□□□ 0.46
FXN-203ENST00000396366 CRLS1Q9UJA2 301 aa17.91■□□□□ 0.46
FXN-203ENST00000396366 TMEM184BQ9Y519 407 aaPredicted RBP17.91■□□□□ 0.46
FXN-203ENST00000396366 GOLGA6L9A6NEM1 432 aa17.9■□□□□ 0.46
FXN-203ENST00000396366 MIF4GDA9UHW6 222 aaKnown RBP17.9■□□□□ 0.46
FXN-203ENST00000396366 B8ZZF3 427 aa17.9■□□□□ 0.46
FXN-203ENST00000396366 NKX2-8O15522 239 aa17.9■□□□□ 0.46
FXN-203ENST00000396366 DLGAP3O95886 979 aa17.9■□□□□ 0.46
FXN-203ENST00000396366 CDC25BP30305 580 aa17.9■□□□□ 0.46
FXN-203ENST00000396366 CFAP206Q8IYR0 622 aa17.9■□□□□ 0.46
FXN-203ENST00000396366 OR2L2Q8NH16 312 aa17.9■□□□□ 0.46
FXN-203ENST00000396366 SLC35B2Q8TB61 432 aa17.9■□□□□ 0.46
FXN-203ENST00000396366 ATG4AQ8WYN0 398 aa17.9■□□□□ 0.46
FXN-203ENST00000396366 KLHL6Q8WZ60 621 aa17.9■□□□□ 0.46
FXN-203ENST00000396366 HES6Q96HZ4 224 aa17.9■□□□□ 0.46
FXN-203ENST00000396366 ZNF514Q96K75 400 aaPredicted RBP17.9■□□□□ 0.46
FXN-203ENST00000396366 DNAJC1Q96KC8 554 aaKnown RBP17.9■□□□□ 0.46
FXN-203ENST00000396366 ZPBPQ9BS86 351 aa17.9■□□□□ 0.46
FXN-203ENST00000396366 IMPACTQ9P2X3 320 aa17.9■□□□□ 0.46
FXN-203ENST00000396366 IL17BQ9UHF5 180 aa17.9■□□□□ 0.46
FXN-203ENST00000396366 IGHV5-51A0A0C4DH38 117 aa17.89■□□□□ 0.45
FXN-203ENST00000396366 PYCARD-AS1I3L0S3 204 aa17.89■□□□□ 0.45
FXN-203ENST00000396366 TOX3O15405 576 aaPredicted RBP17.89■□□□□ 0.45
FXN-203ENST00000396366 MTHFD1P11586 935 aaKnown RBP17.89■□□□□ 0.45
FXN-203ENST00000396366 ITGB6P18564 788 aa17.89■□□□□ 0.45
FXN-203ENST00000396366 MAP4P27816 1152 aaKnown RBP17.89■□□□□ 0.45
FXN-203ENST00000396366 MC4RP32245 332 aa17.89■□□□□ 0.45
FXN-203ENST00000396366 BCL7AQ4VC05 210 aa17.89■□□□□ 0.45
FXN-203ENST00000396366 CERS6Q6ZMG9 384 aa17.89■□□□□ 0.45
FXN-203ENST00000396366 PRSS42Q7Z5A4 293 aa17.89■□□□□ 0.45
FXN-203ENST00000396366 SNX20Q7Z614 316 aa17.89■□□□□ 0.45
FXN-203ENST00000396366 NXPE1Q8N323 547 aa17.89■□□□□ 0.45
FXN-203ENST00000396366 TTC13Q8NBP0 860 aa17.89■□□□□ 0.45
FXN-203ENST00000396366 DCUN1D1Q96GG9 259 aa17.89■□□□□ 0.45
FXN-203ENST00000396366 ZDHHC12Q96GR4 267 aa17.89■□□□□ 0.45
FXN-203ENST00000396366 C12orf66Q96MD2 445 aa17.89■□□□□ 0.45
FXN-203ENST00000396366 GPN2Q9H9Y4 310 aaPredicted RBP17.89■□□□□ 0.45
FXN-203ENST00000396366 EPHA6Q9UF33 1036 aa17.89■□□□□ 0.45
FXN-203ENST00000396366 BSNQ9UPA5 3926 aa17.88■□□□□ 0.45
FXN-203ENST00000396366 CCDC78A2IDD5 438 aa17.88■□□□□ 0.45
FXN-203ENST00000396366 NFKB2Q00653 900 aa17.88■□□□□ 0.45
FXN-203ENST00000396366 PDE1BQ01064 536 aa17.88■□□□□ 0.45
FXN-203ENST00000396366 NFATC3Q12968 1075 aa17.88■□□□□ 0.45
FXN-203ENST00000396366 KCNAB1Q14722 419 aa17.88■□□□□ 0.45
FXN-203ENST00000396366 POU6F1Q14863 301 aa17.88■□□□□ 0.45
FXN-203ENST00000396366 PLCL1Q15111 1095 aa17.88■□□□□ 0.45
FXN-203ENST00000396366 LINC00615Q96LM1 132 aaPredicted RBP17.88■□□□□ 0.45
FXN-203ENST00000396366 RMDN2Q96LZ7 410 aa17.88■□□□□ 0.45
FXN-203ENST00000396366 COPS8Q99627 209 aa17.88■□□□□ 0.45
FXN-203ENST00000396366 NRTNQ99748 197 aa17.88■□□□□ 0.45
FXN-203ENST00000396366 ULBP3Q9BZM4 244 aa17.88■□□□□ 0.45
FXN-203ENST00000396366 RAB33BQ9H082 229 aa17.88■□□□□ 0.45
FXN-203ENST00000396366 ACSL5Q9ULC5 683 aa17.88■□□□□ 0.45
FXN-203ENST00000396366 MRPS18BQ9Y676 258 aaKnown RBP17.88■□□□□ 0.45
FXN-203ENST00000396366 TLN1Q9Y490 2541 aaKnown RBP17.87■□□□□ 0.45
FXN-203ENST00000396366 ATP1B2P14415 290 aaPredicted RBP17.87■□□□□ 0.45
FXN-203ENST00000396366 NELFEP18615 380 aaKnown RBP17.87■□□□□ 0.45
FXN-203ENST00000396366 ITGALP20701 1170 aa17.87■□□□□ 0.45
FXN-203ENST00000396366 F8A1P23610 371 aa17.87■□□□□ 0.45
FXN-203ENST00000396366 HADHAP40939 763 aa17.87■□□□□ 0.45
FXN-203ENST00000396366 SEPT6Q14141 434 aa17.87■□□□□ 0.45
FXN-203ENST00000396366 ZRANB3Q5FWF4 1079 aa17.87■□□□□ 0.45
FXN-203ENST00000396366 CAPRIN2Q6IMN6 1127 aaKnown RBP17.87■□□□□ 0.45
FXN-203ENST00000396366 PRUNE1Q86TP1 453 aa17.87■□□□□ 0.45
FXN-203ENST00000396366 GALNT6Q8NCL4 622 aa17.87■□□□□ 0.45
FXN-203ENST00000396366 ULK4Q96C45 1275 aa17.87■□□□□ 0.45
FXN-203ENST00000396366 SLC45A3Q96JT2 553 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms