RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 CD320Q9NPF0 282 aa3.34□□□□□ -1.87
VPS13C-203ENST00000395896 CCDC177Q9NQR7 707 aaPredicted RBP3.34□□□□□ -1.87
VPS13C-203ENST00000395896 KRT87PA6NCN2 255 aa3.34□□□□□ -1.87
VPS13C-203ENST00000395896 LDLRP01130 860 aa3.34□□□□□ -1.87
VPS13C-203ENST00000395896 EPHA3P29320 983 aa3.34□□□□□ -1.87
VPS13C-203ENST00000395896 PRKCQQ04759 706 aa3.34□□□□□ -1.87
VPS13C-203ENST00000395896 RFWD3Q6PCD5 774 aa3.34□□□□□ -1.87
VPS13C-203ENST00000395896 PRSS55Q6UWB4 352 aaPredicted RBP3.34□□□□□ -1.87
VPS13C-203ENST00000395896 UNC5DQ6UXZ4 953 aa3.34□□□□□ -1.87
VPS13C-203ENST00000395896 LRRC74BQ6ZQY2 392 aa3.34□□□□□ -1.87
VPS13C-203ENST00000395896 DCUN1D3Q8IWE4 304 aa3.34□□□□□ -1.87
VPS13C-203ENST00000395896 LINC00471Q8N535 108 aa3.34□□□□□ -1.87
VPS13C-203ENST00000395896 ZBTB2Q8N680 514 aa3.34□□□□□ -1.87
VPS13C-203ENST00000395896 GRIN3AQ8TCU5 1115 aa3.34□□□□□ -1.87
VPS13C-203ENST00000395896 ITCHQ96J02 903 aa3.34□□□□□ -1.87
VPS13C-203ENST00000395896 AARSD1Q9BTE6 412 aaKnown RBP3.34□□□□□ -1.87
VPS13C-203ENST00000395896 OSBPL11Q9BXB4 747 aa3.34□□□□□ -1.87
VPS13C-203ENST00000395896 MYLK2Q9H1R3 596 aa3.34□□□□□ -1.87
VPS13C-203ENST00000395896 NLRC5Q86WI3 1866 aa3.34□□□□□ -1.87
VPS13C-203ENST00000395896 GTF3C1Q12789 2109 aa3.34□□□□□ -1.87
VPS13C-203ENST00000395896 MYO7BQ6PIF6 2116 aa3.34□□□□□ -1.87
VPS13C-203ENST00000395896 MYADML2A6NDP7 307 aa3.34□□□□□ -1.87
VPS13C-203ENST00000395896 DUXAA6NLW8 204 aa3.34□□□□□ -1.87
VPS13C-203ENST00000395896 FAM155AB1AL88 458 aaPredicted RBP3.34□□□□□ -1.87
VPS13C-203ENST00000395896 GFRA2O00451 464 aa3.34□□□□□ -1.87
VPS13C-203ENST00000395896 ADAMDEC1O15204 470 aa3.34□□□□□ -1.87
VPS13C-203ENST00000395896 CACNG3O60359 315 aa3.34□□□□□ -1.87
VPS13C-203ENST00000395896 RFPL1O75677 317 aa3.34□□□□□ -1.87
VPS13C-203ENST00000395896 GOT2P00505 430 aaKnown RBP3.34□□□□□ -1.87
VPS13C-203ENST00000395896 PIK3R1P27986 724 aa3.34□□□□□ -1.87
VPS13C-203ENST00000395896 GRIA2P42262 883 aa3.34□□□□□ -1.87
VPS13C-203ENST00000395896 TNFAIP8L3Q5GJ75 292 aa3.34□□□□□ -1.87
VPS13C-203ENST00000395896 SIRPB2Q5JXA9 342 aa3.34□□□□□ -1.87
VPS13C-203ENST00000395896 ZNF784Q8NCA9 323 aaPredicted RBP3.34□□□□□ -1.87
VPS13C-203ENST00000395896 HIPK4Q8NE63 616 aa3.34□□□□□ -1.87
VPS13C-203ENST00000395896 ZBED6CLQ96FA7 236 aaPredicted RBP3.34□□□□□ -1.87
VPS13C-203ENST00000395896 PANX1Q96RD7 426 aa3.34□□□□□ -1.87
VPS13C-203ENST00000395896 ADAM33Q9BZ11 813 aa3.34□□□□□ -1.87
VPS13C-203ENST00000395896 TRIT1Q9H3H1 467 aaKnown RBP3.34□□□□□ -1.87
VPS13C-203ENST00000395896 C17orf113A0A1B0GUU1 675 aa3.34□□□□□ -1.87
VPS13C-203ENST00000395896 AQP12BA6NM10 295 aa3.34□□□□□ -1.87
VPS13C-203ENST00000395896 MRASO14807 208 aa3.34□□□□□ -1.87
VPS13C-203ENST00000395896 SLC35G6P0C7Q6 338 aa3.34□□□□□ -1.87
VPS13C-203ENST00000395896 FSHRP23945 695 aa3.34□□□□□ -1.87
VPS13C-203ENST00000395896 MAGEA8P43361 318 aa3.34□□□□□ -1.87
VPS13C-203ENST00000395896 WDR5P61964 334 aaKnown RBP3.34□□□□□ -1.87
VPS13C-203ENST00000395896 TNK2Q07912 1038 aa3.34□□□□□ -1.87
VPS13C-203ENST00000395896 PLCL1Q15111 1095 aa3.34□□□□□ -1.87
VPS13C-203ENST00000395896 CA9Q16790 459 aa3.34□□□□□ -1.87
VPS13C-203ENST00000395896 DENND6AQ8IWF6 608 aa3.34□□□□□ -1.87
VPS13C-203ENST00000395896 AQP12AQ8IXF9 295 aa3.34□□□□□ -1.87
VPS13C-203ENST00000395896 TRAM1L1Q8N609 369 aa3.34□□□□□ -1.87
VPS13C-203ENST00000395896 NPWQ8N729 165 aa3.34□□□□□ -1.87
VPS13C-203ENST00000395896 TRPV3Q8NET8 790 aa3.34□□□□□ -1.87
VPS13C-203ENST00000395896 BHLHE22Q8NFJ8 381 aaPredicted RBP3.34□□□□□ -1.87
VPS13C-203ENST00000395896 RDH12Q96NR8 316 aa3.34□□□□□ -1.87
VPS13C-203ENST00000395896 LDHAL6BQ9BYZ2 381 aaPredicted RBP3.34□□□□□ -1.87
VPS13C-203ENST00000395896 ALG2Q9H553 416 aa3.34□□□□□ -1.87
VPS13C-203ENST00000395896 EPHX3Q9H6B9 360 aa3.34□□□□□ -1.87
VPS13C-203ENST00000395896 PSMD13Q9UNM6 376 aa3.34□□□□□ -1.87
VPS13C-203ENST00000395896 GSC2O15499 205 aa3.34□□□□□ -1.87
VPS13C-203ENST00000395896 DHRS4L1P0CG22 281 aa3.34□□□□□ -1.87
VPS13C-203ENST00000395896 NMBRP28336 390 aa3.34□□□□□ -1.87
VPS13C-203ENST00000395896 ABL2P42684 1182 aa3.34□□□□□ -1.87
VPS13C-203ENST00000395896 NCALDP61601 193 aa3.34□□□□□ -1.87
VPS13C-203ENST00000395896 PPARDQ03181 441 aa3.34□□□□□ -1.87
VPS13C-203ENST00000395896 ALFQ53S48 1182 aa3.34□□□□□ -1.87
VPS13C-203ENST00000395896 FAM151BQ6UXP7 276 aa3.34□□□□□ -1.87
VPS13C-203ENST00000395896 MSANTD1Q6ZTZ1 278 aa3.34□□□□□ -1.87
VPS13C-203ENST00000395896 FAM120BQ96EK7 910 aaKnown RBP3.34□□□□□ -1.87
VPS13C-203ENST00000395896 CDRT15Q96T59 188 aa3.34□□□□□ -1.87
VPS13C-203ENST00000395896 LPIN3Q9BQK8 851 aa3.34□□□□□ -1.87
VPS13C-203ENST00000395896 SPHK2Q9NRA0 654 aa3.34□□□□□ -1.87
VPS13C-203ENST00000395896 ZNF282Q9UDV7 671 aaPredicted RBP3.34□□□□□ -1.87
VPS13C-203ENST00000395896 TRPS1Q9UHF7 1281 aa3.34□□□□□ -1.87
VPS13C-203ENST00000395896 STOML2Q9UJZ1 356 aa3.34□□□□□ -1.87
VPS13C-203ENST00000395896 MEIS3P2A8K0S8 358 aa3.34□□□□□ -1.87
VPS13C-203ENST00000395896 RFXANKO14593 260 aa3.34□□□□□ -1.87
VPS13C-203ENST00000395896 CCNT2O60583 730 aaKnown RBP3.34□□□□□ -1.87
VPS13C-203ENST00000395896 CNPP09543 421 aaKnown RBP3.34□□□□□ -1.87
VPS13C-203ENST00000395896 C5AR1P21730 350 aa3.34□□□□□ -1.87
VPS13C-203ENST00000395896 CBX2Q14781 532 aaPredicted RBP3.34□□□□□ -1.87
VPS13C-203ENST00000395896 EOGTQ5NDL2 527 aa3.34□□□□□ -1.87
VPS13C-203ENST00000395896 FRG2Q64ET8 278 aa3.34□□□□□ -1.87
VPS13C-203ENST00000395896 ZBTB49Q6ZSB9 765 aa3.34□□□□□ -1.87
VPS13C-203ENST00000395896 PAQR9Q6ZVX9 377 aa3.34□□□□□ -1.87
VPS13C-203ENST00000395896 LRRTM3Q86VH5 581 aa3.34□□□□□ -1.87
VPS13C-203ENST00000395896 HM13Q8TCT9 377 aa3.34□□□□□ -1.87
VPS13C-203ENST00000395896 FRG2BQ96QU4 278 aa3.34□□□□□ -1.87
VPS13C-203ENST00000395896 SLC2A4RGQ9NR83 387 aa3.34□□□□□ -1.87
VPS13C-203ENST00000395896 GPR34Q9UPC5 381 aa3.34□□□□□ -1.87
VPS13C-203ENST00000395896 SNX13Q9Y5W8 968 aa3.34□□□□□ -1.87
VPS13C-203ENST00000395896 LRRC37A2A6NM11 1700 aa3.34□□□□□ -1.88
VPS13C-203ENST00000395896 CCDC162PA2VCL2 907 aa3.34□□□□□ -1.88
VPS13C-203ENST00000395896 ZDHHC11BP0C7U3 371 aa3.34□□□□□ -1.88
VPS13C-203ENST00000395896 VAV1P15498 845 aa3.34□□□□□ -1.88
VPS13C-203ENST00000395896 DPP6P42658 865 aa3.34□□□□□ -1.88
VPS13C-203ENST00000395896 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.34□□□□□ -1.88
VPS13C-203ENST00000395896 SF3A3Q12874 501 aaKnown RBP eCLIP3.34□□□□□ -1.882e-8■■■■□ 21.7
VPS13C-203ENST00000395896 TYSND1Q2T9J0 566 aa3.34□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms