RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 ITGB6P18564 788 aa13.46□□□□□ -0.26
VAPB-202ENST00000395802 TFEBP19484 476 aa13.46□□□□□ -0.26
VAPB-202ENST00000395802 CCR7P32248 378 aa13.46□□□□□ -0.26
VAPB-202ENST00000395802 GLRBP48167 497 aa13.46□□□□□ -0.26
VAPB-202ENST00000395802 RPL6Q02878 288 aaKnown RBP13.46□□□□□ -0.26
VAPB-202ENST00000395802 HSPA14Q0VDF9 509 aa13.46□□□□□ -0.26
VAPB-202ENST00000395802 BOP1Q14137 746 aaKnown RBP13.46□□□□□ -0.26
VAPB-202ENST00000395802 NFATC4Q14934 902 aa13.46□□□□□ -0.26
VAPB-202ENST00000395802 PDK4Q16654 411 aa13.46□□□□□ -0.26
VAPB-202ENST00000395802 ATG16L1Q676U5 607 aa13.46□□□□□ -0.26
VAPB-202ENST00000395802 ISCA2Q86U28 154 aa13.46□□□□□ -0.26
VAPB-202ENST00000395802 TRIM74Q86UV6 250 aa13.46□□□□□ -0.26
VAPB-202ENST00000395802 AMZ2Q86W34 360 aa13.46□□□□□ -0.26
VAPB-202ENST00000395802 DCP2Q8IU60 420 aaKnown RBP13.46□□□□□ -0.26
VAPB-202ENST00000395802 NUDCD3Q8IVD9 361 aa13.46□□□□□ -0.26
VAPB-202ENST00000395802 SLC22A9Q8IVM8 553 aa13.46□□□□□ -0.26
VAPB-202ENST00000395802 TMEM145Q8NBT3 493 aa13.46□□□□□ -0.26
VAPB-202ENST00000395802 PPP1R14CQ8TAE6 165 aa13.46□□□□□ -0.26
VAPB-202ENST00000395802 LRRC8CQ8TDW0 803 aa13.46□□□□□ -0.26
VAPB-202ENST00000395802 EEF1AKMT1Q8WVE0 214 aa13.46□□□□□ -0.26
VAPB-202ENST00000395802 RLN3Q8WXF3 142 aa13.46□□□□□ -0.26
VAPB-202ENST00000395802 FOPNLQ96NB1 174 aa13.46□□□□□ -0.26
VAPB-202ENST00000395802 GPR78Q96P69 363 aa13.46□□□□□ -0.26
VAPB-202ENST00000395802 PRMT8Q9NR22 394 aaPredicted RBP13.46□□□□□ -0.26
VAPB-202ENST00000395802 XPR1Q9UBH6 696 aa13.46□□□□□ -0.26
VAPB-202ENST00000395802 NUMA1Q14980 2115 aa13.45□□□□□ -0.26
VAPB-202ENST00000395802 MGAT4DA6NG13 374 aa13.45□□□□□ -0.26
VAPB-202ENST00000395802 BTN3A1O00481 513 aa13.45□□□□□ -0.26
VAPB-202ENST00000395802 NDUFAB1O14561 156 aa13.45□□□□□ -0.26
VAPB-202ENST00000395802 GRID2O43424 1007 aa13.45□□□□□ -0.26
VAPB-202ENST00000395802 SLCO2B1O94956 709 aa13.45□□□□□ -0.26
VAPB-202ENST00000395802 TPBGLP0DKB5 382 aa13.45□□□□□ -0.26
VAPB-202ENST00000395802 MPC1LP0DKB6 136 aa13.45□□□□□ -0.26
VAPB-202ENST00000395802 CD27P26842 260 aa13.45□□□□□ -0.26
VAPB-202ENST00000395802 CTSCP53634 463 aa13.45□□□□□ -0.26
VAPB-202ENST00000395802 PFN3P60673 137 aa13.45□□□□□ -0.26
VAPB-202ENST00000395802 OVGP1Q12889 678 aa13.45□□□□□ -0.26
VAPB-202ENST00000395802 RPA4Q13156 261 aa13.45□□□□□ -0.26
VAPB-202ENST00000395802 TECRLQ5HYJ1 363 aa13.45□□□□□ -0.26
VAPB-202ENST00000395802 TMEM31Q5JXX7 168 aa13.45□□□□□ -0.26
VAPB-202ENST00000395802 ZNF648Q5T619 568 aaPredicted RBP13.45□□□□□ -0.26
VAPB-202ENST00000395802 C16orf46Q6P387 395 aa13.45□□□□□ -0.26
VAPB-202ENST00000395802 DOK6Q6PKX4 331 aa13.45□□□□□ -0.26
VAPB-202ENST00000395802 RGS9BPQ6ZS82 235 aa13.45□□□□□ -0.26
VAPB-202ENST00000395802 ZNF771Q7L3S4 317 aaPredicted RBP13.45□□□□□ -0.26
VAPB-202ENST00000395802 GALNT13Q8IUC8 556 aa13.45□□□□□ -0.26
VAPB-202ENST00000395802 BEND7Q8N7W2 519 aaPredicted RBP13.45□□□□□ -0.26
VAPB-202ENST00000395802 OR56A4Q8NGH8 313 aa13.45□□□□□ -0.26
VAPB-202ENST00000395802 OR2L2Q8NH16 312 aa13.45□□□□□ -0.26
VAPB-202ENST00000395802 GIMAP7Q8NHV1 300 aa13.45□□□□□ -0.26
VAPB-202ENST00000395802 HM13Q8TCT9 377 aa13.45□□□□□ -0.26
VAPB-202ENST00000395802 SNX19Q92543 992 aa13.45□□□□□ -0.26
VAPB-202ENST00000395802 GLMNQ92990 594 aa13.45□□□□□ -0.26
VAPB-202ENST00000395802 CCDC97Q96F63 343 aaPredicted RBP13.45□□□□□ -0.26
VAPB-202ENST00000395802 LGR4Q9BXB1 951 aa13.45□□□□□ -0.26
VAPB-202ENST00000395802 TRIM54Q9BYV2 358 aa13.45□□□□□ -0.26
VAPB-202ENST00000395802 DPEP2Q9H4A9 486 aa13.45□□□□□ -0.26
VAPB-202ENST00000395802 FZD3Q9NPG1 666 aa13.45□□□□□ -0.26
VAPB-202ENST00000395802 ZNF358Q9NW07 568 aa13.45□□□□□ -0.26
VAPB-202ENST00000395802 RNF112Q9ULX5 631 aa13.45□□□□□ -0.26
VAPB-202ENST00000395802 TMEM98Q9Y2Y6 226 aa13.45□□□□□ -0.26
VAPB-202ENST00000395802 PI15O43692 258 aa13.44□□□□□ -0.26
VAPB-202ENST00000395802 SGTAO43765 313 aa13.44□□□□□ -0.26
VAPB-202ENST00000395802 KERAO60938 352 aa13.44□□□□□ -0.26
VAPB-202ENST00000395802 SMIM24O75264 130 aa13.44□□□□□ -0.26
VAPB-202ENST00000395802 GPC4O75487 556 aa13.44□□□□□ -0.26
VAPB-202ENST00000395802 POP7O75817 140 aaKnown RBP13.44□□□□□ -0.26
VAPB-202ENST00000395802 TSPAN12O95859 305 aa13.44□□□□□ -0.26
VAPB-202ENST00000395802 TOP3BO95985 862 aaKnown RBP13.44□□□□□ -0.26
VAPB-202ENST00000395802 PDGFBP01127 241 aaPredicted RBP13.44□□□□□ -0.26
VAPB-202ENST00000395802 C8GP07360 202 aa13.44□□□□□ -0.26
VAPB-202ENST00000395802 BPGMP07738 259 aa13.44□□□□□ -0.26
VAPB-202ENST00000395802 DRD4P21917 467 aa13.44□□□□□ -0.26
VAPB-202ENST00000395802 ATP5F1P24539 256 aaPredicted RBP13.44□□□□□ -0.26
VAPB-202ENST00000395802 PXNP49023 591 aaPredicted RBP13.44□□□□□ -0.26
VAPB-202ENST00000395802 NAA20P61599 178 aa13.44□□□□□ -0.26
VAPB-202ENST00000395802 DLG1Q12959 904 aa13.44□□□□□ -0.26
VAPB-202ENST00000395802 SP140Q13342 867 aa13.44□□□□□ -0.26
VAPB-202ENST00000395802 FRA10AC1Q70Z53 315 aa13.44□□□□□ -0.26
VAPB-202ENST00000395802 RAB44Q7Z6P3 723 aaPredicted RBP13.44□□□□□ -0.26
VAPB-202ENST00000395802 ABI3BPQ7Z7G0 1075 aa13.44□□□□□ -0.26
VAPB-202ENST00000395802 C1orf210Q8IVY1 113 aa13.44□□□□□ -0.26
VAPB-202ENST00000395802 LRRC34Q8IZ02 419 aa13.44□□□□□ -0.26
VAPB-202ENST00000395802 SPATA6LQ8N4H0 392 aa13.44□□□□□ -0.26
VAPB-202ENST00000395802 ZNF473Q8WTR7 871 aaKnown RBP13.44□□□□□ -0.26
VAPB-202ENST00000395802 SKA2Q8WVK7 121 aaPredicted RBP13.44□□□□□ -0.26
VAPB-202ENST00000395802 SKA1Q96BD8 255 aa13.44□□□□□ -0.26
VAPB-202ENST00000395802 WDR92Q96MX6 357 aa13.44□□□□□ -0.26
VAPB-202ENST00000395802 SLC30A3Q99726 388 aa13.44□□□□□ -0.26
VAPB-202ENST00000395802 MYOCQ99972 504 aa13.44□□□□□ -0.26
VAPB-202ENST00000395802 FAM107BQ9H098 131 aa13.44□□□□□ -0.26
VAPB-202ENST00000395802 ALG9Q9H6U8 611 aa13.44□□□□□ -0.26
VAPB-202ENST00000395802 CPSF2Q9P2I0 782 aaKnown RBP13.44□□□□□ -0.26
VAPB-202ENST00000395802 GALPQ9UBC7 116 aa13.44□□□□□ -0.26
VAPB-202ENST00000395802 ZNHIT2Q9UHR6 403 aa13.44□□□□□ -0.26
VAPB-202ENST00000395802 EMCNQ9ULC0 261 aa13.44□□□□□ -0.26
VAPB-202ENST00000395802 PIKFYVEQ9Y2I7 2098 aa13.44□□□□□ -0.26
VAPB-202ENST00000395802 POM121BA6NF01 834 aa13.43□□□□□ -0.26
VAPB-202ENST00000395802 MEI4A8MW99 385 aa13.43□□□□□ -0.26
VAPB-202ENST00000395802 TCP11X1B4DZS4 312 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms