RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 SLC38A9Q8NBW4 561 aa20.63■□□□□ 0.89
TRAF4-203ENST00000394925 CTNNBL1Q8WYA6 563 aaPredicted RBP20.63■□□□□ 0.89
TRAF4-203ENST00000394925 OLFM3Q96PB7 478 aa20.63■□□□□ 0.89
TRAF4-203ENST00000394925 PACSIN1Q9BY11 444 aa20.63■□□□□ 0.89
TRAF4-203ENST00000394925 MFRPQ9BY79 579 aa20.63■□□□□ 0.89
TRAF4-203ENST00000394925 ZCCHC2Q9C0B9 1178 aaKnown RBP20.63■□□□□ 0.89
TRAF4-203ENST00000394925 CHST8Q9H2A9 424 aa20.63■□□□□ 0.89
TRAF4-203ENST00000394925 CASS4Q9NQ75 786 aa20.63■□□□□ 0.89
TRAF4-203ENST00000394925 NENFQ9UMX5 172 aa20.63■□□□□ 0.89
TRAF4-203ENST00000394925 ZNF451Q9Y4E5 1061 aa20.63■□□□□ 0.89
TRAF4-203ENST00000394925 A0A0A6YYK5 440 aaPredicted RBP20.62■□□□□ 0.89
TRAF4-203ENST00000394925 OR2AG2A6NM03 316 aa20.62■□□□□ 0.89
TRAF4-203ENST00000394925 KLK3P07288 261 aaPredicted RBP20.62■□□□□ 0.89
TRAF4-203ENST00000394925 MTHFD1P11586 935 aaKnown RBP20.62■□□□□ 0.89
TRAF4-203ENST00000394925 LPOP22079 712 aaPredicted RBP20.62■□□□□ 0.89
TRAF4-203ENST00000394925 CA5AP35218 305 aa20.62■□□□□ 0.89
TRAF4-203ENST00000394925 PBX1P40424 430 aa20.62■□□□□ 0.89
TRAF4-203ENST00000394925 XRCC4Q13426 336 aa20.62■□□□□ 0.89
TRAF4-203ENST00000394925 IQCB1Q15051 598 aa20.62■□□□□ 0.89
TRAF4-203ENST00000394925 PPP2R5EQ16537 467 aa20.62■□□□□ 0.89
TRAF4-203ENST00000394925 EIF2S3LQ2VIR3 472 aaKnown RBP20.62■□□□□ 0.89
TRAF4-203ENST00000394925 TEX44Q53QW1 395 aa20.62■□□□□ 0.89
TRAF4-203ENST00000394925 LDLRAP1Q5SW96 308 aa20.62■□□□□ 0.89
TRAF4-203ENST00000394925 IZUMO3Q5VZ72 239 aa20.62■□□□□ 0.89
TRAF4-203ENST00000394925 FAM151BQ6UXP7 276 aa20.62■□□□□ 0.89
TRAF4-203ENST00000394925 OOSP2Q86WS3 158 aa20.62■□□□□ 0.89
TRAF4-203ENST00000394925 ZNF501Q96CX3 271 aaPredicted RBP20.62■□□□□ 0.89
TRAF4-203ENST00000394925 CUEDC1Q9NWM3 386 aaPredicted RBP20.62■□□□□ 0.89
TRAF4-203ENST00000394925 MAP10Q9P2G4 905 aa20.62■□□□□ 0.89
TRAF4-203ENST00000394925 LCMT1Q9UIC8 334 aa20.62■□□□□ 0.89
TRAF4-203ENST00000394925 LUC7L2Q9Y383 392 aaKnown RBP20.62■□□□□ 0.89
TRAF4-203ENST00000394925 C3orf70A6NLC5 250 aaPredicted RBP20.61■□□□□ 0.89
TRAF4-203ENST00000394925 ZNF487B1APH4 448 aa20.61■□□□□ 0.89
TRAF4-203ENST00000394925 DDX3YO15523 660 aaKnown RBP20.61■□□□□ 0.89
TRAF4-203ENST00000394925 ZBTB11O95625 1053 aaPredicted RBP20.61■□□□□ 0.89
TRAF4-203ENST00000394925 SPAM1P38567 509 aa20.61■□□□□ 0.89
TRAF4-203ENST00000394925 ARCN1P48444 511 aaKnown RBP20.61■□□□□ 0.89
TRAF4-203ENST00000394925 DYNLT1P63172 113 aa20.61■□□□□ 0.89
TRAF4-203ENST00000394925 FANCCQ00597 558 aa20.61■□□□□ 0.89
TRAF4-203ENST00000394925 MRPL49Q13405 166 aaKnown RBP20.61■□□□□ 0.89
TRAF4-203ENST00000394925 TMTC4Q5T4D3 741 aa20.61■□□□□ 0.89
TRAF4-203ENST00000394925 PRAMEF17Q5VTA0 474 aa20.61■□□□□ 0.89
TRAF4-203ENST00000394925 CRYBG3Q68DQ2 2970 aa20.61■□□□□ 0.89
TRAF4-203ENST00000394925 LCN10Q6JVE6 187 aa20.61■□□□□ 0.89
TRAF4-203ENST00000394925 ARMC6Q6NXE6 501 aa20.61■□□□□ 0.89
TRAF4-203ENST00000394925 JMJD6Q6NYC1 403 aaPredicted RBP20.61■□□□□ 0.89
TRAF4-203ENST00000394925 DUS1LQ6P1R4 473 aaKnown RBP20.61■□□□□ 0.89
TRAF4-203ENST00000394925 FBXO38Q6PIJ6 1188 aa20.61■□□□□ 0.89
TRAF4-203ENST00000394925 ZNF517Q6ZMY9 492 aaPredicted RBP20.61■□□□□ 0.89
TRAF4-203ENST00000394925 RFX6Q8HWS3 928 aa20.61■□□□□ 0.89
TRAF4-203ENST00000394925 OR8K5Q8NH50 307 aa20.61■□□□□ 0.89
TRAF4-203ENST00000394925 ADAMTS17Q8TE56 1095 aa20.61■□□□□ 0.89
TRAF4-203ENST00000394925 INSM2Q96T92 566 aaPredicted RBP20.61■□□□□ 0.89
TRAF4-203ENST00000394925 WWP1Q9H0M0 922 aa20.61■□□□□ 0.89
TRAF4-203ENST00000394925 TRABDQ9H4I3 376 aa20.61■□□□□ 0.89
TRAF4-203ENST00000394925 SLAMF7Q9NQ25 335 aa20.61■□□□□ 0.89
TRAF4-203ENST00000394925 SOHLH2Q9NX45 425 aa20.61■□□□□ 0.89
TRAF4-203ENST00000394925 SNX7Q9UNH6 387 aa20.61■□□□□ 0.89
TRAF4-203ENST00000394925 DNMT3AQ9Y6K1 912 aaPredicted RBP20.61■□□□□ 0.89
TRAF4-203ENST00000394925 SEC16AO15027 2179 aa20.61■□□□□ 0.89
TRAF4-203ENST00000394925 OR6C74A6NCV1 312 aa20.6■□□□□ 0.89
TRAF4-203ENST00000394925 TCP11X1B4DZS4 312 aa20.6■□□□□ 0.89
TRAF4-203ENST00000394925 BUD23O43709 281 aaKnown RBP20.6■□□□□ 0.89
TRAF4-203ENST00000394925 DPM1O60762 260 aa20.6■□□□□ 0.89
TRAF4-203ENST00000394925 CEACAM4O75871 244 aa20.6■□□□□ 0.89
TRAF4-203ENST00000394925 TMEM63AO94886 807 aa20.6■□□□□ 0.89
TRAF4-203ENST00000394925 ZFXP17010 805 aaPredicted RBP20.6■□□□□ 0.89
TRAF4-203ENST00000394925 PTPN3P26045 913 aa20.6■□□□□ 0.89
TRAF4-203ENST00000394925 FNBP1LQ5T0N5 605 aa20.6■□□□□ 0.89
TRAF4-203ENST00000394925 GPRC6AQ5T6X5 926 aa20.6■□□□□ 0.89
TRAF4-203ENST00000394925 FAM69BQ5VUD6 431 aa20.6■□□□□ 0.89
TRAF4-203ENST00000394925 ZDHHC20Q5W0Z9 365 aa20.6■□□□□ 0.89
TRAF4-203ENST00000394925 METRNLQ641Q3 311 aa20.6■□□□□ 0.89
TRAF4-203ENST00000394925 SLC25A41Q8N5S1 370 aa20.6■□□□□ 0.89
TRAF4-203ENST00000394925 BEND7Q8N7W2 519 aaPredicted RBP20.6■□□□□ 0.89
TRAF4-203ENST00000394925 ENDOVQ8N8Q3 282 aaKnown RBP20.6■□□□□ 0.89
TRAF4-203ENST00000394925 Q8NA96 180 aa20.6■□□□□ 0.89
TRAF4-203ENST00000394925 DDHD1Q8NEL9 900 aa20.6■□□□□ 0.89
TRAF4-203ENST00000394925 FDCSPQ8NFU4 85 aa20.6■□□□□ 0.89
TRAF4-203ENST00000394925 TEKT5Q96M29 485 aa20.6■□□□□ 0.89
TRAF4-203ENST00000394925 C12orf66Q96MD2 445 aa20.6■□□□□ 0.89
TRAF4-203ENST00000394925 PPM1MQ96MI6 270 aa20.6■□□□□ 0.89
TRAF4-203ENST00000394925 IL17CQ9P0M4 197 aa20.6■□□□□ 0.89
TRAF4-203ENST00000394925 FAM153AQ9UHL3 310 aa20.6■□□□□ 0.89
TRAF4-203ENST00000394925 PCDHGB7Q9Y5F8 929 aa20.6■□□□□ 0.89
TRAF4-203ENST00000394925 CELSR2Q9HCU4 2923 aa20.6■□□□□ 0.89
TRAF4-203ENST00000394925 GLYATL1P3A0A0U1RQE8 302 aa20.59■□□□□ 0.89
TRAF4-203ENST00000394925 LOC285095A0A1B0GVY8 99 aa20.59■□□□□ 0.89
TRAF4-203ENST00000394925 A6NL46 340 aa20.59■□□□□ 0.89
TRAF4-203ENST00000394925 MEN1O00255 615 aa20.59■□□□□ 0.89
TRAF4-203ENST00000394925 ZNF185O15231 689 aa20.59■□□□□ 0.89
TRAF4-203ENST00000394925 CHRNA4P43681 627 aa20.59■□□□□ 0.89
TRAF4-203ENST00000394925 KPNA2P52292 529 aaKnown RBP20.59■□□□□ 0.89
TRAF4-203ENST00000394925 WNT3AP56704 352 aa20.59■□□□□ 0.89
TRAF4-203ENST00000394925 GSDMDP57764 484 aa20.59■□□□□ 0.89
TRAF4-203ENST00000394925 SIRPB2Q5JXA9 342 aa20.59■□□□□ 0.89
TRAF4-203ENST00000394925 PLEKHS1Q5SXH7 462 aa20.59■□□□□ 0.89
TRAF4-203ENST00000394925 DET1Q7L5Y6 550 aa20.59■□□□□ 0.89
TRAF4-203ENST00000394925 PRR7Q8TB68 274 aa20.59■□□□□ 0.89
TRAF4-203ENST00000394925 DTX3LQ8TDB6 740 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms