RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 ARMC5Q96C12 935 aa18.11■□□□□ 0.49
PCDHA1-202ENST00000394633 PPM1MQ96MI6 270 aa18.11■□□□□ 0.49
PCDHA1-202ENST00000394633 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.11■□□□□ 0.49
PCDHA1-202ENST00000394633 MAGED1Q9Y5V3 778 aaPredicted RBP18.11■□□□□ 0.49
PCDHA1-202ENST00000394633 IGLV3-27P01718 113 aa18.1■□□□□ 0.49
PCDHA1-202ENST00000394633 MBL2P11226 248 aaPredicted RBP18.1■□□□□ 0.49
PCDHA1-202ENST00000394633 ZNF182P17025 639 aaPredicted RBP18.1■□□□□ 0.49
PCDHA1-202ENST00000394633 UGT1A1P22309 533 aa18.1■□□□□ 0.49
PCDHA1-202ENST00000394633 UGT1A4P22310 534 aa18.1■□□□□ 0.49
PCDHA1-202ENST00000394633 UGT1A3P35503 534 aa18.1■□□□□ 0.49
PCDHA1-202ENST00000394633 UGT1A5P35504 534 aa18.1■□□□□ 0.49
PCDHA1-202ENST00000394633 RGRP47804 291 aa18.1■□□□□ 0.49
PCDHA1-202ENST00000394633 ERVPABLB-1P60509 514 aa18.1■□□□□ 0.49
PCDHA1-202ENST00000394633 ATP6AP1LQ52LC2 224 aa18.1■□□□□ 0.49
PCDHA1-202ENST00000394633 GLT6D1Q7Z4J2 308 aa18.1■□□□□ 0.49
PCDHA1-202ENST00000394633 SFRP1Q8N474 314 aa18.1■□□□□ 0.49
PCDHA1-202ENST00000394633 EEF1AKMT1Q8WVE0 214 aa18.1■□□□□ 0.49
PCDHA1-202ENST00000394633 PLEKHA8Q96JA3 519 aa18.1■□□□□ 0.49
PCDHA1-202ENST00000394633 MGME1Q9BQP7 344 aa18.1■□□□□ 0.49
PCDHA1-202ENST00000394633 ZBED2Q9BTP6 218 aa18.1■□□□□ 0.49
PCDHA1-202ENST00000394633 PFDN4Q9NQP4 134 aa18.1■□□□□ 0.49
PCDHA1-202ENST00000394633 VWA8A3KMH1 1905 aa18.1■□□□□ 0.49
PCDHA1-202ENST00000394633 A0A0D9SEW6 157 aa18.1■□□□□ 0.49
PCDHA1-202ENST00000394633 OR1I1O60431 355 aa18.1■□□□□ 0.49
PCDHA1-202ENST00000394633 ALPLP05186 524 aa18.1■□□□□ 0.49
PCDHA1-202ENST00000394633 HTR6P50406 440 aa18.1■□□□□ 0.49
PCDHA1-202ENST00000394633 CBX2Q14781 532 aaPredicted RBP18.1■□□□□ 0.49
PCDHA1-202ENST00000394633 C10orf120Q5SQS8 335 aa18.1■□□□□ 0.49
PCDHA1-202ENST00000394633 PSAPL1Q6NUJ1 521 aa18.1■□□□□ 0.49
PCDHA1-202ENST00000394633 LETMD1Q6P1Q0 360 aa18.1■□□□□ 0.49
PCDHA1-202ENST00000394633 GPSM1Q86YR5 675 aa18.1■□□□□ 0.49
PCDHA1-202ENST00000394633 ZC3H7AQ8IWR0 971 aaKnown RBP18.1■□□□□ 0.49
PCDHA1-202ENST00000394633 PIANPQ8IYJ0 282 aa18.1■□□□□ 0.49
PCDHA1-202ENST00000394633 CFAP52Q8N1V2 620 aa18.1■□□□□ 0.49
PCDHA1-202ENST00000394633 LINGO1Q96FE5 620 aa18.1■□□□□ 0.49
PCDHA1-202ENST00000394633 ZNF382Q96SR6 550 aa18.1■□□□□ 0.49
PCDHA1-202ENST00000394633 ACTL8Q9H568 366 aa18.1■□□□□ 0.49
PCDHA1-202ENST00000394633 HEBP1Q9NRV9 189 aa18.1■□□□□ 0.49
PCDHA1-202ENST00000394633 TMEM45AQ9NWC5 275 aa18.1■□□□□ 0.49
PCDHA1-202ENST00000394633 CD274Q9NZQ7 290 aa18.1■□□□□ 0.49
PCDHA1-202ENST00000394633 NEUROG3Q9Y4Z2 214 aa18.1■□□□□ 0.49
PCDHA1-202ENST00000394633 GRXCR2A6NFK2 248 aa18.09■□□□□ 0.49
PCDHA1-202ENST00000394633 NOL3O60936 208 aaKnown RBP18.09■□□□□ 0.49
PCDHA1-202ENST00000394633 TULP3O75386 442 aa18.09■□□□□ 0.49
PCDHA1-202ENST00000394633 DEAF1O75398 565 aaPredicted RBP18.09■□□□□ 0.49
PCDHA1-202ENST00000394633 SEC14L2O76054 403 aa18.09■□□□□ 0.49
PCDHA1-202ENST00000394633 THRBP10828 461 aa18.09■□□□□ 0.49
PCDHA1-202ENST00000394633 PCNAP12004 261 aa18.09■□□□□ 0.49
PCDHA1-202ENST00000394633 PKMP14618 531 aaKnown RBP18.09■□□□□ 0.49
PCDHA1-202ENST00000394633 EEF1B2P24534 225 aaKnown RBP18.09■□□□□ 0.49
PCDHA1-202ENST00000394633 HOXD9P28356 352 aaPredicted RBP18.09■□□□□ 0.49
PCDHA1-202ENST00000394633 C21orf59P57076 290 aa18.09■□□□□ 0.49
PCDHA1-202ENST00000394633 TRAF2Q12933 501 aa18.09■□□□□ 0.49
PCDHA1-202ENST00000394633 CTSL3PQ5NE16 218 aa18.09■□□□□ 0.49
PCDHA1-202ENST00000394633 ACBD5Q5T8D3 534 aaPredicted RBP18.09■□□□□ 0.49
PCDHA1-202ENST00000394633 XAF1Q6GPH4 301 aa18.09■□□□□ 0.49
PCDHA1-202ENST00000394633 ZNF280BQ86YH2 543 aa18.09■□□□□ 0.49
PCDHA1-202ENST00000394633 SNX19Q92543 992 aa18.09■□□□□ 0.49
PCDHA1-202ENST00000394633 FBXO32Q969P5 355 aa18.09■□□□□ 0.49
PCDHA1-202ENST00000394633 RMDN1Q96DB5 314 aa18.09■□□□□ 0.49
PCDHA1-202ENST00000394633 FUBP3Q96I24 572 aaKnown RBP eCLIP18.09■□□□□ 0.49
PCDHA1-202ENST00000394633 IL37Q9NZH6 218 aa18.09■□□□□ 0.49
PCDHA1-202ENST00000394633 TRMT6Q9UJA5 497 aaKnown RBP18.09■□□□□ 0.49
PCDHA1-202ENST00000394633 ATP11BQ9Y2G3 1177 aa18.09■□□□□ 0.49
PCDHA1-202ENST00000394633 CDH23Q9H251 3354 aa18.09■□□□□ 0.49
PCDHA1-202ENST00000394633 VPS26AO75436 327 aa18.08■□□□□ 0.49
PCDHA1-202ENST00000394633 OAZ2O95190 189 aa18.08■□□□□ 0.49
PCDHA1-202ENST00000394633 ANXA6P08133 673 aa18.08■□□□□ 0.49
PCDHA1-202ENST00000394633 RAP2AP10114 183 aa18.08■□□□□ 0.49
PCDHA1-202ENST00000394633 CCNA2P20248 432 aa18.08■□□□□ 0.49
PCDHA1-202ENST00000394633 GJA8P48165 433 aa18.08■□□□□ 0.49
PCDHA1-202ENST00000394633 GATMP50440 423 aa18.08■□□□□ 0.49
PCDHA1-202ENST00000394633 TMBIM6P55061 237 aa18.08■□□□□ 0.49
PCDHA1-202ENST00000394633 FAM189BP81408 668 aa18.08■□□□□ 0.49
PCDHA1-202ENST00000394633 TAF1AQ15573 450 aaPredicted RBP18.08■□□□□ 0.49
PCDHA1-202ENST00000394633 MOGQ16653 247 aa18.08■□□□□ 0.49
PCDHA1-202ENST00000394633 AAK1Q2M2I8 961 aa18.08■□□□□ 0.49
PCDHA1-202ENST00000394633 PLA2G4EQ3MJ16 856 aa18.08■□□□□ 0.49
PCDHA1-202ENST00000394633 STK32CQ86UX6 486 aa18.08■□□□□ 0.49
PCDHA1-202ENST00000394633 OR7D4Q8NG98 312 aa18.08■□□□□ 0.49
PCDHA1-202ENST00000394633 ITFG1Q8TB96 612 aa18.08■□□□□ 0.49
PCDHA1-202ENST00000394633 CD200R1Q8TD46 325 aa18.08■□□□□ 0.49
PCDHA1-202ENST00000394633 PAWRQ96IZ0 340 aaKnown RBP18.08■□□□□ 0.49
PCDHA1-202ENST00000394633 CGREF1Q99674 301 aa18.08■□□□□ 0.49
PCDHA1-202ENST00000394633 CARS2Q9HA77 564 aaKnown RBP18.08■□□□□ 0.49
PCDHA1-202ENST00000394633 ST14Q9Y5Y6 855 aa18.08■□□□□ 0.49
PCDHA1-202ENST00000394633 BOLA2-SMG1P6H3BVE0 249 aa18.08■□□□□ 0.48
PCDHA1-202ENST00000394633 ARNTLO00327 626 aa18.08■□□□□ 0.48
PCDHA1-202ENST00000394633 RSL1D1O76021 490 aaKnown RBP18.08■□□□□ 0.48
PCDHA1-202ENST00000394633 ZBTB11O95625 1053 aaPredicted RBP18.08■□□□□ 0.48
PCDHA1-202ENST00000394633 G6PDP11413 515 aa18.08■□□□□ 0.48
PCDHA1-202ENST00000394633 GGT1P19440 569 aa18.08■□□□□ 0.48
PCDHA1-202ENST00000394633 TACR2P21452 398 aa18.08■□□□□ 0.48
PCDHA1-202ENST00000394633 MAP4P27816 1152 aaKnown RBP18.08■□□□□ 0.48
PCDHA1-202ENST00000394633 BMXP51813 675 aa18.08■□□□□ 0.48
PCDHA1-202ENST00000394633 DGKQP52824 942 aa18.08■□□□□ 0.48
PCDHA1-202ENST00000394633 NFE2Q16621 373 aaPredicted RBP18.08■□□□□ 0.48
PCDHA1-202ENST00000394633 BROXQ5VW32 411 aa18.08■□□□□ 0.48
PCDHA1-202ENST00000394633 PRR23BQ6ZRT6 265 aa18.08■□□□□ 0.48
PCDHA1-202ENST00000394633 DEFB128Q7Z7B8 93 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms