RNA–Protein interactions for RNA: ENST00000394609.6

RTN4-205, Transcript of reticulon 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN4, Length 1,898 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-205ENST00000394609 HELZP42694 1942 aaKnown RBP6.86□□□□□ -1.31
RTN4-205ENST00000394609 C2orf16Q68DN1 1984 aa6.86□□□□□ -1.31
RTN4-205ENST00000394609 GLYATL1P3A0A0U1RQE8 302 aa6.86□□□□□ -1.31
RTN4-205ENST00000394609 C16orf96A6NNT2 1141 aa6.86□□□□□ -1.31
RTN4-205ENST00000394609 TARM1B6A8C7 271 aa6.86□□□□□ -1.31
RTN4-205ENST00000394609 PLK4O00444 970 aa6.86□□□□□ -1.31
RTN4-205ENST00000394609 ZBTB14O43829 449 aa6.86□□□□□ -1.31
RTN4-205ENST00000394609 DLX3O60479 287 aa6.86□□□□□ -1.31
RTN4-205ENST00000394609 TRIM13O60858 407 aa6.86□□□□□ -1.31
RTN4-205ENST00000394609 SERPINE1P05121 402 aa6.86□□□□□ -1.31
RTN4-205ENST00000394609 APOA4P06727 396 aa6.86□□□□□ -1.31
RTN4-205ENST00000394609 LTA4HP09960 611 aaKnown RBP6.86□□□□□ -1.31
RTN4-205ENST00000394609 ITGB6P18564 788 aa6.86□□□□□ -1.31
RTN4-205ENST00000394609 CHRM3P20309 590 aa6.86□□□□□ -1.31
RTN4-205ENST00000394609 CCR10P46092 362 aa6.86□□□□□ -1.31
RTN4-205ENST00000394609 KCNC1P48547 511 aa6.86□□□□□ -1.31
RTN4-205ENST00000394609 SLC1A6P48664 564 aa6.86□□□□□ -1.31
RTN4-205ENST00000394609 NAGLUP54802 743 aa6.86□□□□□ -1.31
RTN4-205ENST00000394609 AP2B1P63010 937 aa6.86□□□□□ -1.31
RTN4-205ENST00000394609 ZNF234Q14588 700 aa6.86□□□□□ -1.31
RTN4-205ENST00000394609 MYBPC3Q14896 1274 aa6.86□□□□□ -1.31
RTN4-205ENST00000394609 ADRM1Q16186 407 aa6.86□□□□□ -1.31
RTN4-205ENST00000394609 SETMARQ53H47 684 aaPredicted RBP6.86□□□□□ -1.31
RTN4-205ENST00000394609 ZNF805Q5CZA5 627 aa6.86□□□□□ -1.31
RTN4-205ENST00000394609 AARS2Q5JTZ9 985 aaKnown RBP6.86□□□□□ -1.31
RTN4-205ENST00000394609 CTSL3PQ5NE16 218 aa6.86□□□□□ -1.31
RTN4-205ENST00000394609 C9orf64Q5T6V5 341 aa6.86□□□□□ -1.31
RTN4-205ENST00000394609 AGAP9Q5VTM2 703 aa6.86□□□□□ -1.31
RTN4-205ENST00000394609 KLC3Q6P597 504 aa6.86□□□□□ -1.31
RTN4-205ENST00000394609 BRAT1Q6PJG6 821 aa6.86□□□□□ -1.31
RTN4-205ENST00000394609 PAQR3Q6TCH7 311 aa6.86□□□□□ -1.31
RTN4-205ENST00000394609 SERPINA13PQ6UXR4 307 aa6.86□□□□□ -1.31
RTN4-205ENST00000394609 ZYG11AQ6WRX3 759 aa6.86□□□□□ -1.31
RTN4-205ENST00000394609 CRLF3Q8IUI8 442 aa6.86□□□□□ -1.31
RTN4-205ENST00000394609 CLDN19Q8N6F1 224 aa6.86□□□□□ -1.31
RTN4-205ENST00000394609 TERB1Q8NA31 727 aa6.86□□□□□ -1.31
RTN4-205ENST00000394609 SIDT2Q8NBJ9 832 aaKnown RBP6.86□□□□□ -1.31
RTN4-205ENST00000394609 AGR3Q8TD06 166 aa6.86□□□□□ -1.31
RTN4-205ENST00000394609 ELSPBP1Q96BH3 223 aa6.86□□□□□ -1.31
RTN4-205ENST00000394609 PTERQ96BW5 349 aa6.86□□□□□ -1.31
RTN4-205ENST00000394609 HIC2Q96JB3 615 aa6.86□□□□□ -1.31
RTN4-205ENST00000394609 RIPOR3Q96MK2 946 aa6.86□□□□□ -1.31
RTN4-205ENST00000394609 C7orf26Q96N11 449 aa6.86□□□□□ -1.31
RTN4-205ENST00000394609 BTBD9Q96Q07 612 aa6.86□□□□□ -1.31
RTN4-205ENST00000394609 MCCC1Q96RQ3 725 aaPredicted RBP6.86□□□□□ -1.31
RTN4-205ENST00000394609 GPR21Q99679 349 aa6.86□□□□□ -1.31
RTN4-205ENST00000394609 SLC30A3Q99726 388 aa6.86□□□□□ -1.31
RTN4-205ENST00000394609 MRPL57Q9BQC6 102 aaKnown RBP6.86□□□□□ -1.31
RTN4-205ENST00000394609 TRMT61BQ9BVS5 477 aaKnown RBP6.86□□□□□ -1.31
RTN4-205ENST00000394609 GATA5Q9BWX5 397 aaPredicted RBP6.86□□□□□ -1.31
RTN4-205ENST00000394609 MRPL46Q9H2W6 279 aaKnown RBP6.86□□□□□ -1.31
RTN4-205ENST00000394609 TTYH1Q9H313 450 aaPredicted RBP6.86□□□□□ -1.31
RTN4-205ENST00000394609 KCNK13Q9HB14 408 aa6.86□□□□□ -1.31
RTN4-205ENST00000394609 CYP4F12Q9HCS2 524 aa6.86□□□□□ -1.31
RTN4-205ENST00000394609 SARS2Q9NP81 518 aaKnown RBP6.86□□□□□ -1.31
RTN4-205ENST00000394609 DNAAF2Q9NVR5 837 aaKnown RBP6.86□□□□□ -1.31
RTN4-205ENST00000394609 OXSMQ9NWU1 459 aa6.86□□□□□ -1.31
RTN4-205ENST00000394609 CACNA2D2Q9NY47 1150 aa6.86□□□□□ -1.31
RTN4-205ENST00000394609 ZDHHC3Q9NYG2 299 aa6.86□□□□□ -1.31
RTN4-205ENST00000394609 ITM2BQ9Y287 266 aa6.86□□□□□ -1.31
RTN4-205ENST00000394609 NUMBLQ9Y6R0 609 aa6.86□□□□□ -1.31
RTN4-205ENST00000394609 ATG2AQ2TAZ0 1938 aa6.85□□□□□ -1.31
RTN4-205ENST00000394609 H3BMM5 538 aa6.85□□□□□ -1.31
RTN4-205ENST00000394609 H3BQ06 376 aaPredicted RBP6.85□□□□□ -1.31
RTN4-205ENST00000394609 PFDN6O15212 129 aa6.85□□□□□ -1.31
RTN4-205ENST00000394609 PEX1O43933 1283 aa6.85□□□□□ -1.31
RTN4-205ENST00000394609 KAT7O95251 611 aa6.85□□□□□ -1.31
RTN4-205ENST00000394609 WISP3O95389 354 aaPredicted RBP6.85□□□□□ -1.31
RTN4-205ENST00000394609 CBX6O95503 412 aa6.85□□□□□ -1.31
RTN4-205ENST00000394609 PYGLP06737 847 aa6.85□□□□□ -1.31
RTN4-205ENST00000394609 C1SP09871 688 aa6.85□□□□□ -1.31
RTN4-205ENST00000394609 FURINP09958 794 aa6.85□□□□□ -1.31
RTN4-205ENST00000394609 PKMP14618 531 aaKnown RBP6.85□□□□□ -1.31
RTN4-205ENST00000394609 ZNF37AP17032 561 aaPredicted RBP6.85□□□□□ -1.31
RTN4-205ENST00000394609 TFEBP19484 476 aa6.85□□□□□ -1.31
RTN4-205ENST00000394609 ITGALP20701 1170 aa6.85□□□□□ -1.31
RTN4-205ENST00000394609 KCNA5P22460 613 aa6.85□□□□□ -1.31
RTN4-205ENST00000394609 XPAP23025 273 aaPredicted RBP6.85□□□□□ -1.31
RTN4-205ENST00000394609 SPAM1P38567 509 aa6.85□□□□□ -1.31
RTN4-205ENST00000394609 WASP42768 502 aa6.85□□□□□ -1.31
RTN4-205ENST00000394609 PTGER3P43115 390 aa6.85□□□□□ -1.31
RTN4-205ENST00000394609 RANBP1P43487 201 aa6.85□□□□□ -1.31
RTN4-205ENST00000394609 SUOXP51687 545 aa6.85□□□□□ -1.31
RTN4-205ENST00000394609 ABCE1P61221 599 aaKnown RBP6.85□□□□□ -1.31
RTN4-205ENST00000394609 ASPHQ12797 758 aa6.85□□□□□ -1.31
RTN4-205ENST00000394609 ARHGEF7Q14155 803 aa6.85□□□□□ -1.31
RTN4-205ENST00000394609 EIF4HQ15056 248 aaKnown RBP6.85□□□□□ -1.31
RTN4-205ENST00000394609 HNRNPA1L2Q32P51 320 aaKnown RBP6.85□□□□□ -1.31
RTN4-205ENST00000394609 ATP13A5Q4VNC0 1218 aa6.85□□□□□ -1.31
RTN4-205ENST00000394609 Q6ZVL8 140 aa6.85□□□□□ -1.31
RTN4-205ENST00000394609 HSD11B1LQ7Z5J1 315 aa6.85□□□□□ -1.31
RTN4-205ENST00000394609 SNX20Q7Z614 316 aa6.85□□□□□ -1.31
RTN4-205ENST00000394609 ISCA2Q86U28 154 aa6.85□□□□□ -1.31
RTN4-205ENST00000394609 MYLK4Q86YV6 388 aaPredicted RBP6.85□□□□□ -1.31
RTN4-205ENST00000394609 TMEM126BQ8IUX1 230 aa6.85□□□□□ -1.31
RTN4-205ENST00000394609 CCNYL1Q8N7R7 359 aa6.85□□□□□ -1.31
RTN4-205ENST00000394609 TXNDC5Q8NBS9 432 aaKnown RBP6.85□□□□□ -1.31
RTN4-205ENST00000394609 PHC3Q8NDX5 983 aa6.85□□□□□ -1.31
RTN4-205ENST00000394609 RAB3IL1Q8TBN0 382 aa6.85□□□□□ -1.31
RTN4-205ENST00000394609 JADE3Q92613 823 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms