RNA–Protein interactions for RNA: ENST00000394154.2

VTI1BP2-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 2, humanhuman

BASIC

Gene VTI1BP2, Length 696 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP2-201ENST00000394154 CHRNA4P43681 627 aa10.94□□□□□ -0.66
VTI1BP2-201ENST00000394154 EPHB1P54762 984 aa10.94□□□□□ -0.66
VTI1BP2-201ENST00000394154 RPL26P61254 145 aaKnown RBP10.94□□□□□ -0.66
VTI1BP2-201ENST00000394154 PDE1CQ14123 709 aaPredicted RBP10.94□□□□□ -0.66
VTI1BP2-201ENST00000394154 FRG1Q14331 258 aaKnown RBP10.94□□□□□ -0.66
VTI1BP2-201ENST00000394154 POU6F1Q14863 301 aa10.94□□□□□ -0.66
VTI1BP2-201ENST00000394154 CRYMQ14894 314 aa10.94□□□□□ -0.66
VTI1BP2-201ENST00000394154 ANKRD20A4Q4UJ75 823 aa10.94□□□□□ -0.66
VTI1BP2-201ENST00000394154 TMEM259Q4ZIN3 620 aa10.94□□□□□ -0.66
VTI1BP2-201ENST00000394154 PRRT3Q5FWE3 981 aa10.94□□□□□ -0.66
VTI1BP2-201ENST00000394154 ARMC12Q5T9G4 340 aa10.94□□□□□ -0.66
VTI1BP2-201ENST00000394154 ZNF449Q6P9G9 518 aa10.94□□□□□ -0.66
VTI1BP2-201ENST00000394154 NLRP9Q7RTR0 991 aa10.94□□□□□ -0.66
VTI1BP2-201ENST00000394154 RIBC1Q8N443 379 aaPredicted RBP10.94□□□□□ -0.66
VTI1BP2-201ENST00000394154 OR6C4Q8NGE1 309 aa10.94□□□□□ -0.66
VTI1BP2-201ENST00000394154 PDCD6IPQ8WUM4 868 aaKnown RBP10.94□□□□□ -0.66
VTI1BP2-201ENST00000394154 ZNF669Q96BR6 464 aaPredicted RBP10.94□□□□□ -0.66
VTI1BP2-201ENST00000394154 ZBTB9Q96C00 473 aa10.94□□□□□ -0.66
VTI1BP2-201ENST00000394154 TUBGCP5Q96RT8 1024 aa10.94□□□□□ -0.66
VTI1BP2-201ENST00000394154 TRIB3Q96RU7 358 aa10.94□□□□□ -0.66
VTI1BP2-201ENST00000394154 RANBP9Q96S59 729 aa10.94□□□□□ -0.66
VTI1BP2-201ENST00000394154 TDRD1Q9BXT4 1180 aaKnown RBP10.94□□□□□ -0.66
VTI1BP2-201ENST00000394154 STMN4Q9H169 189 aaPredicted RBP10.94□□□□□ -0.66
VTI1BP2-201ENST00000394154 TMBIM4Q9HC24 238 aa10.94□□□□□ -0.66
VTI1BP2-201ENST00000394154 AKAP7Q9P0M2 348 aaPredicted RBP10.94□□□□□ -0.66
VTI1BP2-201ENST00000394154 GULP1Q9UBP9 304 aa10.94□□□□□ -0.66
VTI1BP2-201ENST00000394154 FETUBQ9UGM5 382 aa10.94□□□□□ -0.66
VTI1BP2-201ENST00000394154 SLC24A2Q9UI40 661 aa10.94□□□□□ -0.66
VTI1BP2-201ENST00000394154 RPL26L1Q9UNX3 145 aaKnown RBP10.94□□□□□ -0.66
VTI1BP2-201ENST00000394154 TCAF1Q9Y4C2 921 aa10.94□□□□□ -0.66
VTI1BP2-201ENST00000394154 IKBKGQ9Y6K9 419 aa10.94□□□□□ -0.66
VTI1BP2-201ENST00000394154 FAM169AQ9Y6X4 670 aa10.94□□□□□ -0.66
VTI1BP2-201ENST00000394154 RP1L1Q8IWN7 2480 aaPredicted RBP10.94□□□□□ -0.66
VTI1BP2-201ENST00000394154 A0A1W2PQ67 120 aa10.93□□□□□ -0.66
VTI1BP2-201ENST00000394154 TCRBV9S1A1TA0A576 114 aa10.93□□□□□ -0.66
VTI1BP2-201ENST00000394154 SMIM23A6NLE4 172 aa10.93□□□□□ -0.66
VTI1BP2-201ENST00000394154 EFCAB7A8K855 629 aa10.93□□□□□ -0.66
VTI1BP2-201ENST00000394154 ANKRD66B4E2M5 251 aa10.93□□□□□ -0.66
VTI1BP2-201ENST00000394154 POC1B-GALNT4F8VUJ3 575 aa10.93□□□□□ -0.66
VTI1BP2-201ENST00000394154 YY2O15391 372 aa10.93□□□□□ -0.66
VTI1BP2-201ENST00000394154 BNIP3LO60238 219 aa10.93□□□□□ -0.66
VTI1BP2-201ENST00000394154 SOCS5O75159 536 aa10.93□□□□□ -0.66
VTI1BP2-201ENST00000394154 CDH16O75309 829 aa10.93□□□□□ -0.66
VTI1BP2-201ENST00000394154 SYF2O95926 243 aaKnown RBP10.93□□□□□ -0.66
VTI1BP2-201ENST00000394154 PAMP19021 973 aa10.93□□□□□ -0.66
VTI1BP2-201ENST00000394154 MSH2P43246 934 aa10.93□□□□□ -0.66
VTI1BP2-201ENST00000394154 TRAF2Q12933 501 aa10.93□□□□□ -0.66
VTI1BP2-201ENST00000394154 EIF2B5Q13144 721 aaKnown RBP10.93□□□□□ -0.66
VTI1BP2-201ENST00000394154 C1orf61Q13536 156 aa10.93□□□□□ -0.66
VTI1BP2-201ENST00000394154 GALNT3Q14435 633 aa10.93□□□□□ -0.66
VTI1BP2-201ENST00000394154 LONRF1Q17RB8 773 aa10.93□□□□□ -0.66
VTI1BP2-201ENST00000394154 AGBL2Q5U5Z8 902 aa10.93□□□□□ -0.66
VTI1BP2-201ENST00000394154 SEL1L3Q68CR1 1132 aa10.93□□□□□ -0.66
VTI1BP2-201ENST00000394154 TMEM135Q86UB9 458 aa10.93□□□□□ -0.66
VTI1BP2-201ENST00000394154 TDRPQ86YL5 185 aa10.93□□□□□ -0.66
VTI1BP2-201ENST00000394154 PHACTR4Q8IZ21 702 aa10.93□□□□□ -0.66
VTI1BP2-201ENST00000394154 RBFAQ8N0V3 343 aa10.93□□□□□ -0.66
VTI1BP2-201ENST00000394154 CNPY4Q8N129 248 aa10.93□□□□□ -0.66
VTI1BP2-201ENST00000394154 SLC34A3Q8N130 599 aa10.93□□□□□ -0.66
VTI1BP2-201ENST00000394154 NDUFAF2Q8N183 169 aa10.93□□□□□ -0.66
VTI1BP2-201ENST00000394154 KYQ8NBH2 561 aa10.93□□□□□ -0.66
VTI1BP2-201ENST00000394154 LPCAT1Q8NF37 534 aa10.93□□□□□ -0.66
VTI1BP2-201ENST00000394154 BRSK1Q8TDC3 778 aa10.93□□□□□ -0.66
VTI1BP2-201ENST00000394154 EPS8L3Q8TE67 593 aaKnown RBP10.93□□□□□ -0.66
VTI1BP2-201ENST00000394154 CDKL2Q92772 493 aa10.93□□□□□ -0.66
VTI1BP2-201ENST00000394154 SLC45A3Q96JT2 553 aa10.93□□□□□ -0.66
VTI1BP2-201ENST00000394154 NSMCE3Q96MG7 304 aa10.93□□□□□ -0.66
VTI1BP2-201ENST00000394154 SRPK1Q96SB4 655 aaKnown RBP10.93□□□□□ -0.66
VTI1BP2-201ENST00000394154 HEPHQ9BQS7 1158 aa10.93□□□□□ -0.66
VTI1BP2-201ENST00000394154 LRRC61Q9BV99 259 aa10.93□□□□□ -0.66
VTI1BP2-201ENST00000394154 PPANQ9NQ55 473 aaKnown RBP10.93□□□□□ -0.66
VTI1BP2-201ENST00000394154 DYRK4Q9NR20 520 aa10.93□□□□□ -0.66
VTI1BP2-201ENST00000394154 CHRAC1Q9NRG0 131 aa10.93□□□□□ -0.66
VTI1BP2-201ENST00000394154 FAM53CQ9NYF3 392 aa10.93□□□□□ -0.66
VTI1BP2-201ENST00000394154 MOCS1Q9NZB8 636 aa10.93□□□□□ -0.66
VTI1BP2-201ENST00000394154 OGFRQ9NZT2 677 aa10.93□□□□□ -0.66
VTI1BP2-201ENST00000394154 HACD3Q9P035 362 aa10.93□□□□□ -0.66
VTI1BP2-201ENST00000394154 VPS18Q9P253 973 aa10.93□□□□□ -0.66
VTI1BP2-201ENST00000394154 ESPL1Q14674 2120 aa10.93□□□□□ -0.66
VTI1BP2-201ENST00000394154 TRPM6Q9BX84 2022 aa10.92□□□□□ -0.66
VTI1BP2-201ENST00000394154 FAM159BA6NKW6 160 aa10.92□□□□□ -0.66
VTI1BP2-201ENST00000394154 HMGB1P1B2RPK0 211 aaPredicted RBP10.92□□□□□ -0.66
VTI1BP2-201ENST00000394154 AGRPO00253 132 aa10.92□□□□□ -0.66
VTI1BP2-201ENST00000394154 FPGTO14772 594 aa10.92□□□□□ -0.66
VTI1BP2-201ENST00000394154 SPINT1O43278 529 aa10.92□□□□□ -0.66
VTI1BP2-201ENST00000394154 HTRA2O43464 458 aaPredicted RBP10.92□□□□□ -0.66
VTI1BP2-201ENST00000394154 PGLSO95336 258 aa10.92□□□□□ -0.66
VTI1BP2-201ENST00000394154 CRTAMO95727 393 aa10.92□□□□□ -0.66
VTI1BP2-201ENST00000394154 PRLP01236 227 aa10.92□□□□□ -0.66
VTI1BP2-201ENST00000394154 INHBAP08476 426 aa10.92□□□□□ -0.66
VTI1BP2-201ENST00000394154 PRKAR1AP10644 381 aa10.92□□□□□ -0.66
VTI1BP2-201ENST00000394154 ATP5DP30049 168 aa10.92□□□□□ -0.66
VTI1BP2-201ENST00000394154 SLCO1A2P46721 670 aa10.92□□□□□ -0.66
VTI1BP2-201ENST00000394154 CCNHP51946 323 aaPredicted RBP10.92□□□□□ -0.66
VTI1BP2-201ENST00000394154 RPS21P63220 83 aaKnown RBP10.92□□□□□ -0.66
VTI1BP2-201ENST00000394154 PDE1BQ01064 536 aa10.92□□□□□ -0.66
VTI1BP2-201ENST00000394154 MGAT5Q09328 741 aa10.92□□□□□ -0.66
VTI1BP2-201ENST00000394154 CDC20Q12834 499 aa10.92□□□□□ -0.66
VTI1BP2-201ENST00000394154 NAB1Q13506 487 aa10.92□□□□□ -0.66
VTI1BP2-201ENST00000394154 RASA2Q15283 850 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms