RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 RORAP35398 523 aa15□□□□□ -0.01
CHMP3-202ENST00000393773 ARL4DP49703 201 aa15□□□□□ -0.01
CHMP3-202ENST00000393773 PDE1BQ01064 536 aa15□□□□□ -0.01
CHMP3-202ENST00000393773 NOMO1Q15155 1222 aa15□□□□□ -0.01
CHMP3-202ENST00000393773 ZNF787Q6DD87 383 aa15□□□□□ -0.01
CHMP3-202ENST00000393773 NPNTQ6UXI9 565 aa15□□□□□ -0.01
CHMP3-202ENST00000393773 OOSP2Q86WS3 158 aa15□□□□□ -0.01
CHMP3-202ENST00000393773 DSELQ8IZU8 1212 aa15□□□□□ -0.01
CHMP3-202ENST00000393773 RBMXL3Q8N7X1 1067 aaKnown RBP15□□□□□ -0.01
CHMP3-202ENST00000393773 ENDOVQ8N8Q3 282 aaKnown RBP15□□□□□ -0.01
CHMP3-202ENST00000393773 OR8K5Q8NH50 307 aa15□□□□□ -0.01
CHMP3-202ENST00000393773 GDAP1Q8TB36 358 aa15□□□□□ -0.01
CHMP3-202ENST00000393773 DTX3LQ8TDB6 740 aa15□□□□□ -0.01
CHMP3-202ENST00000393773 PPM1MQ96MI6 270 aa15□□□□□ -0.01
CHMP3-202ENST00000393773 ZCCHC2Q9C0B9 1178 aaKnown RBP15□□□□□ -0.01
CHMP3-202ENST00000393773 IL26Q9NPH9 171 aa15□□□□□ -0.01
CHMP3-202ENST00000393773 CASS4Q9NQ75 786 aa15□□□□□ -0.01
CHMP3-202ENST00000393773 IMP3Q9NV31 184 aaKnown RBP15□□□□□ -0.01
CHMP3-202ENST00000393773 CTTNBP2NLQ9P2B4 639 aa15□□□□□ -0.01
CHMP3-202ENST00000393773 UVRAGQ9P2Y5 699 aa15□□□□□ -0.01
CHMP3-202ENST00000393773 UBA6A0AVT1 1052 aaPredicted RBP14.99□□□□□ -0.01
CHMP3-202ENST00000393773 LRRD1A4D1F6 860 aa14.99□□□□□ -0.01
CHMP3-202ENST00000393773 SMTNL1A8MU46 457 aa14.99□□□□□ -0.01
CHMP3-202ENST00000393773 DPM1O60762 260 aa14.99□□□□□ -0.01
CHMP3-202ENST00000393773 POP7O75817 140 aaKnown RBP14.99□□□□□ -0.01
CHMP3-202ENST00000393773 TMEM63AO94886 807 aa14.99□□□□□ -0.01
CHMP3-202ENST00000393773 ZBTB11O95625 1053 aaPredicted RBP14.99□□□□□ -0.01
CHMP3-202ENST00000393773 CLDN1O95832 211 aa14.99□□□□□ -0.01
CHMP3-202ENST00000393773 DDAH2O95865 285 aa14.99□□□□□ -0.01
CHMP3-202ENST00000393773 CAPN1P07384 714 aa14.99□□□□□ -0.01
CHMP3-202ENST00000393773 RAB40ALP0C0E4 278 aa14.99□□□□□ -0.01
CHMP3-202ENST00000393773 KPNA2P52292 529 aaKnown RBP14.99□□□□□ -0.01
CHMP3-202ENST00000393773 ITGA1P56199 1179 aa14.99□□□□□ -0.01
CHMP3-202ENST00000393773 GSDMDP57764 484 aa14.99□□□□□ -0.01
CHMP3-202ENST00000393773 PDK1Q15118 436 aa14.99□□□□□ -0.01
CHMP3-202ENST00000393773 EIF2S3LQ2VIR3 472 aaKnown RBP14.99□□□□□ -0.01
CHMP3-202ENST00000393773 ZNF789Q5FWF6 425 aa14.99□□□□□ -0.01
CHMP3-202ENST00000393773 PRAMEF17Q5VTA0 474 aa14.99□□□□□ -0.01
CHMP3-202ENST00000393773 VSIG1Q86XK7 387 aa14.99□□□□□ -0.01
CHMP3-202ENST00000393773 CARFQ8N187 725 aa14.99□□□□□ -0.01
CHMP3-202ENST00000393773 BRSK1Q8TDC3 778 aa14.99□□□□□ -0.01
CHMP3-202ENST00000393773 PNPLA2Q96AD5 504 aa14.99□□□□□ -0.01
CHMP3-202ENST00000393773 TCTN2Q96GX1 697 aa14.99□□□□□ -0.01
CHMP3-202ENST00000393773 SRPK1Q96SB4 655 aaKnown RBP14.99□□□□□ -0.01
CHMP3-202ENST00000393773 PACSIN1Q9BY11 444 aa14.99□□□□□ -0.01
CHMP3-202ENST00000393773 SLC29A3Q9BZD2 475 aa14.99□□□□□ -0.01
CHMP3-202ENST00000393773 GLOD4Q9HC38 313 aa14.99□□□□□ -0.01
CHMP3-202ENST00000393773 KCND1Q9NSA2 647 aa14.99□□□□□ -0.01
CHMP3-202ENST00000393773 IL17CQ9P0M4 197 aa14.99□□□□□ -0.01
CHMP3-202ENST00000393773 TMEM63CQ9P1W3 806 aa14.99□□□□□ -0.01
CHMP3-202ENST00000393773 TCFL5Q9UL49 500 aa14.99□□□□□ -0.01
CHMP3-202ENST00000393773 SNX7Q9UNH6 387 aa14.99□□□□□ -0.01
CHMP3-202ENST00000393773 CFAP20Q9Y6A4 193 aaKnown RBP14.99□□□□□ -0.01
CHMP3-202ENST00000393773 OTOGQ6ZRI0 2925 aa14.99□□□□□ -0.01
CHMP3-202ENST00000393773 CROCCQ5TZA2 2017 aa14.99□□□□□ -0.01
CHMP3-202ENST00000393773 ANKRD12Q6UB98 2062 aa14.98□□□□□ -0.01
CHMP3-202ENST00000393773 A0A0A6YYK5 440 aaPredicted RBP14.98□□□□□ -0.01
CHMP3-202ENST00000393773 WIPF3A6NGB9 483 aa14.98□□□□□ -0.01
CHMP3-202ENST00000393773 OR2AG2A6NM03 316 aa14.98□□□□□ -0.01
CHMP3-202ENST00000393773 APOL1O14791 398 aa14.98□□□□□ -0.01
CHMP3-202ENST00000393773 PPP1R12AO14974 1030 aaPredicted RBP14.98□□□□□ -0.01
CHMP3-202ENST00000393773 PMPCBO75439 489 aa14.98□□□□□ -0.01
CHMP3-202ENST00000393773 LDLRP01130 860 aa14.98□□□□□ -0.01
CHMP3-202ENST00000393773 COL8A1P27658 744 aa14.98□□□□□ -0.01
CHMP3-202ENST00000393773 PBLDP30039 288 aaPredicted RBP14.98□□□□□ -0.01
CHMP3-202ENST00000393773 SPAM1P38567 509 aa14.98□□□□□ -0.01
CHMP3-202ENST00000393773 DCTP40126 519 aa14.98□□□□□ -0.01
CHMP3-202ENST00000393773 ZBED6P86452 979 aa14.98□□□□□ -0.01
CHMP3-202ENST00000393773 LDLRAP1Q5SW96 308 aa14.98□□□□□ -0.01
CHMP3-202ENST00000393773 PLEKHS1Q5SXH7 462 aa14.98□□□□□ -0.01
CHMP3-202ENST00000393773 GPRC6AQ5T6X5 926 aa14.98□□□□□ -0.01
CHMP3-202ENST00000393773 METRNLQ641Q3 311 aa14.98□□□□□ -0.01
CHMP3-202ENST00000393773 FBXO38Q6PIJ6 1188 aa14.98□□□□□ -0.01
CHMP3-202ENST00000393773 KDELC1Q6UW63 502 aa14.98□□□□□ -0.01
CHMP3-202ENST00000393773 FAM151BQ6UXP7 276 aa14.98□□□□□ -0.01
CHMP3-202ENST00000393773 B4GALNT4Q76KP1 1039 aa14.98□□□□□ -0.01
CHMP3-202ENST00000393773 MAMDC2Q7Z304 686 aaPredicted RBP14.98□□□□□ -0.01
CHMP3-202ENST00000393773 HPS6Q86YV9 775 aa14.98□□□□□ -0.01
CHMP3-202ENST00000393773 TTC25Q96NG3 672 aa14.98□□□□□ -0.01
CHMP3-202ENST00000393773 TLR10Q9BXR5 811 aa14.98□□□□□ -0.01
CHMP3-202ENST00000393773 MFRPQ9BY79 579 aa14.98□□□□□ -0.01
CHMP3-202ENST00000393773 NLNQ9BYT8 704 aa14.98□□□□□ -0.01
CHMP3-202ENST00000393773 WWP1Q9H0M0 922 aa14.98□□□□□ -0.01
CHMP3-202ENST00000393773 KIR3DX1Q9H7L2 352 aa14.98□□□□□ -0.01
CHMP3-202ENST00000393773 SMOXQ9NWM0 555 aa14.98□□□□□ -0.01
CHMP3-202ENST00000393773 HRASLS2Q9NWW9 162 aa14.98□□□□□ -0.01
CHMP3-202ENST00000393773 UBP1Q9NZI7 540 aa14.98□□□□□ -0.01
CHMP3-202ENST00000393773 SLC24A2Q9UI40 661 aa14.98□□□□□ -0.01
CHMP3-202ENST00000393773 ERRFI1Q9UJM3 462 aaPredicted RBP14.98□□□□□ -0.01
CHMP3-202ENST00000393773 APCP25054 2843 aa14.98□□□□□ -0.01
CHMP3-202ENST00000393773 LOC285095A0A1B0GVY8 99 aa14.97□□□□□ -0.01
CHMP3-202ENST00000393773 MEN1O00255 615 aa14.97□□□□□ -0.01
CHMP3-202ENST00000393773 UGT1A9O60656 530 aa14.97□□□□□ -0.01
CHMP3-202ENST00000393773 MBD3O95983 291 aa14.97□□□□□ -0.01
CHMP3-202ENST00000393773 UGT1A6P19224 532 aa14.97□□□□□ -0.01
CHMP3-202ENST00000393773 UGT1A1P22309 533 aa14.97□□□□□ -0.01
CHMP3-202ENST00000393773 UGT1A4P22310 534 aa14.97□□□□□ -0.01
CHMP3-202ENST00000393773 PTPN3P26045 913 aa14.97□□□□□ -0.01
CHMP3-202ENST00000393773 CD68P34810 354 aaPredicted RBP14.97□□□□□ -0.01
CHMP3-202ENST00000393773 CHRNA4P43681 627 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms