RNA–Protein interactions for RNA: ENST00000393083.2

PTN-202, Transcript of pleiotrophin, humanhuman

TSL 5 BASIC

Gene PTN, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-202ENST00000393083 CPA3P15088 417 aa13.38□□□□□ -0.27
PTN-202ENST00000393083 ZNF37AP17032 561 aaPredicted RBP13.38□□□□□ -0.27
PTN-202ENST00000393083 GM2AP17900 193 aa13.38□□□□□ -0.27
PTN-202ENST00000393083 RPS3P23396 243 aaKnown RBP eCLIP13.38□□□□□ -0.27
PTN-202ENST00000393083 ETV3P41162 512 aa13.38□□□□□ -0.27
PTN-202ENST00000393083 CSNK1EP49674 416 aaKnown RBP13.38□□□□□ -0.27
PTN-202ENST00000393083 LIG3P49916 1009 aa13.38□□□□□ -0.27
PTN-202ENST00000393083 AFF3P51826 1226 aaKnown RBP13.38□□□□□ -0.27
PTN-202ENST00000393083 ADARP55265 1226 aaKnown RBP13.38□□□□□ -0.27
PTN-202ENST00000393083 BNC1Q01954 994 aa13.38□□□□□ -0.27
PTN-202ENST00000393083 ACOX1Q15067 660 aa13.38□□□□□ -0.27
PTN-202ENST00000393083 ATP13A5Q4VNC0 1218 aa13.38□□□□□ -0.27
PTN-202ENST00000393083 ATG16L1Q676U5 607 aa13.38□□□□□ -0.27
PTN-202ENST00000393083 TMEM207Q6UWW9 146 aa13.38□□□□□ -0.27
PTN-202ENST00000393083 LIPIQ6XZB0 460 aa13.38□□□□□ -0.27
PTN-202ENST00000393083 FSTL5Q8N475 847 aaPredicted RBP13.38□□□□□ -0.27
PTN-202ENST00000393083 PPP1R14CQ8TAE6 165 aa13.38□□□□□ -0.27
PTN-202ENST00000393083 RAB3IL1Q8TBN0 382 aa13.38□□□□□ -0.27
PTN-202ENST00000393083 RDH11Q8TC12 318 aa13.38□□□□□ -0.27
PTN-202ENST00000393083 ANKRD49Q8WVL7 239 aa13.38□□□□□ -0.27
PTN-202ENST00000393083 CCDC97Q96F63 343 aaPredicted RBP13.38□□□□□ -0.27
PTN-202ENST00000393083 GPR78Q96P69 363 aa13.38□□□□□ -0.27
PTN-202ENST00000393083 LENG8Q96PV6 779 aaPredicted RBP13.38□□□□□ -0.27
PTN-202ENST00000393083 GPR21Q99679 349 aa13.38□□□□□ -0.27
PTN-202ENST00000393083 BOCQ9BWV1 1114 aa13.38□□□□□ -0.27
PTN-202ENST00000393083 TSSK1BQ9BXA7 367 aa13.38□□□□□ -0.27
PTN-202ENST00000393083 SPATA16Q9BXB7 569 aa13.38□□□□□ -0.27
PTN-202ENST00000393083 PITPNM3Q9BZ71 974 aa13.38□□□□□ -0.27
PTN-202ENST00000393083 FZD3Q9NPG1 666 aa13.38□□□□□ -0.27
PTN-202ENST00000393083 FSCN3Q9NQT6 498 aa13.38□□□□□ -0.27
PTN-202ENST00000393083 PLSCR2Q9NRY7 297 aa13.38□□□□□ -0.27
PTN-202ENST00000393083 CPSF2Q9P2I0 782 aaKnown RBP13.38□□□□□ -0.27
PTN-202ENST00000393083 NFKBIL1Q9UBC1 381 aaPredicted RBP13.38□□□□□ -0.27
PTN-202ENST00000393083 TRMT6Q9UJA5 497 aaKnown RBP13.38□□□□□ -0.27
PTN-202ENST00000393083 GNPTGQ9UJJ9 305 aa13.38□□□□□ -0.27
PTN-202ENST00000393083 CA5BQ9Y2D0 317 aa13.38□□□□□ -0.27
PTN-202ENST00000393083 MED16Q9Y2X0 877 aa13.38□□□□□ -0.27
PTN-202ENST00000393083 PTPRZ1P23471 2315 aaPredicted RBP13.38□□□□□ -0.27
PTN-202ENST00000393083 ANKRD12Q6UB98 2062 aa13.38□□□□□ -0.27
PTN-202ENST00000393083 LNP1A1A4G5 178 aa13.37□□□□□ -0.27
PTN-202ENST00000393083 AGAP14A8MT82 685 aa13.37□□□□□ -0.27
PTN-202ENST00000393083 E5RI56 91 aa13.37□□□□□ -0.27
PTN-202ENST00000393083 PSMD11O00231 422 aa13.37□□□□□ -0.27
PTN-202ENST00000393083 KLF11O14901 512 aa13.37□□□□□ -0.27
PTN-202ENST00000393083 MYL2P10916 166 aa13.37□□□□□ -0.27
PTN-202ENST00000393083 FGF3P11487 239 aaPredicted RBP13.37□□□□□ -0.27
PTN-202ENST00000393083 C6P13671 934 aa13.37□□□□□ -0.27
PTN-202ENST00000393083 HNRNPA2B1P22626 353 aaKnown RBP13.37□□□□□ -0.27
PTN-202ENST00000393083 SLC26A3P40879 764 aa13.37□□□□□ -0.27
PTN-202ENST00000393083 SGCGQ13326 291 aa13.37□□□□□ -0.27
PTN-202ENST00000393083 ITIH4Q14624 930 aa13.37□□□□□ -0.27
PTN-202ENST00000393083 AGERQ15109 404 aa13.37□□□□□ -0.27
PTN-202ENST00000393083 TECRLQ5HYJ1 363 aa13.37□□□□□ -0.27
PTN-202ENST00000393083 GKAP1Q5VSY0 366 aaPredicted RBP13.37□□□□□ -0.27
PTN-202ENST00000393083 PTRHD1Q6GMV3 140 aaKnown RBP13.37□□□□□ -0.27
PTN-202ENST00000393083 LAYNQ6UX15 382 aa13.37□□□□□ -0.27
PTN-202ENST00000393083 ZYG11AQ6WRX3 759 aa13.37□□□□□ -0.27
PTN-202ENST00000393083 ZCCHC23Q6ZST2 131 aa13.37□□□□□ -0.27
PTN-202ENST00000393083 Q6ZVL8 140 aa13.37□□□□□ -0.27
PTN-202ENST00000393083 C10orf107Q8IVU9 208 aa13.37□□□□□ -0.27
PTN-202ENST00000393083 UBXN10Q96LJ8 280 aa13.37□□□□□ -0.27
PTN-202ENST00000393083 ELAC2Q9BQ52 826 aaKnown RBP13.37□□□□□ -0.27
PTN-202ENST00000393083 MRPL57Q9BQC6 102 aaKnown RBP13.37□□□□□ -0.27
PTN-202ENST00000393083 MRPL46Q9H2W6 279 aaKnown RBP13.37□□□□□ -0.27
PTN-202ENST00000393083 FAM83DQ9H4H8 585 aa13.37□□□□□ -0.27
PTN-202ENST00000393083 RXFP3Q9NSD7 469 aa13.37□□□□□ -0.27
PTN-202ENST00000393083 ZDHHC3Q9NYG2 299 aa13.37□□□□□ -0.27
PTN-202ENST00000393083 COQ6Q9Y2Z9 468 aa13.37□□□□□ -0.27
PTN-202ENST00000393083 OAS3Q9Y6K5 1087 aaKnown RBP13.37□□□□□ -0.27
PTN-202ENST00000393083 PI4KAP42356 2102 aa13.37□□□□□ -0.27
PTN-202ENST00000393083 RALGAPA1Q6GYQ0 2036 aa13.37□□□□□ -0.27
PTN-202ENST00000393083 RGSL1A5PLK6 1076 aa13.37□□□□□ -0.27
PTN-202ENST00000393083 G3V2L1 256 aa13.37□□□□□ -0.27
PTN-202ENST00000393083 VILLO15195 856 aa13.37□□□□□ -0.27
PTN-202ENST00000393083 FOXD2O60548 495 aaPredicted RBP13.37□□□□□ -0.27
PTN-202ENST00000393083 CD38P28907 300 aa13.37□□□□□ -0.27
PTN-202ENST00000393083 AKT2P31751 481 aa13.37□□□□□ -0.27
PTN-202ENST00000393083 BST1Q10588 318 aa13.37□□□□□ -0.27
PTN-202ENST00000393083 SF3A3Q12874 501 aaKnown RBP eCLIP13.37□□□□□ -0.27
PTN-202ENST00000393083 HENMT1Q5T8I9 393 aaKnown RBP13.37□□□□□ -0.27
PTN-202ENST00000393083 CGB2Q6NT52 195 aa13.37□□□□□ -0.27
PTN-202ENST00000393083 GCNT7Q6ZNI0 430 aa13.37□□□□□ -0.27
PTN-202ENST00000393083 TECPR1Q7Z6L1 1165 aa13.37□□□□□ -0.27
PTN-202ENST00000393083 ABI3BPQ7Z7G0 1075 aa13.37□□□□□ -0.27
PTN-202ENST00000393083 TRAM1L1Q8N609 369 aa13.37□□□□□ -0.27
PTN-202ENST00000393083 MFSD2AQ8NA29 543 aa13.37□□□□□ -0.27
PTN-202ENST00000393083 SIDT2Q8NBJ9 832 aaKnown RBP13.37□□□□□ -0.27
PTN-202ENST00000393083 TP53I13Q8NBR0 393 aaPredicted RBP13.37□□□□□ -0.27
PTN-202ENST00000393083 DENND6BQ8NEG7 585 aa13.37□□□□□ -0.27
PTN-202ENST00000393083 SREK1Q8WXA9 508 aaKnown RBP13.37□□□□□ -0.27
PTN-202ENST00000393083 KCNJ9Q92806 393 aa13.37□□□□□ -0.27
PTN-202ENST00000393083 SCAMP4Q969E2 229 aa13.37□□□□□ -0.27
PTN-202ENST00000393083 BMFQ96LC9 184 aa13.37□□□□□ -0.27
PTN-202ENST00000393083 COQ10AQ96MF6 247 aa13.37□□□□□ -0.27
PTN-202ENST00000393083 MYOCQ99972 504 aa13.37□□□□□ -0.27
PTN-202ENST00000393083 RIOK2Q9BVS4 552 aaKnown RBP13.37□□□□□ -0.27
PTN-202ENST00000393083 NUSAP1Q9BXS6 441 aaKnown RBP13.37□□□□□ -0.27
PTN-202ENST00000393083 CDH19Q9H159 772 aa13.37□□□□□ -0.27
PTN-202ENST00000393083 SYTL2Q9HCH5 934 aa13.37□□□□□ -0.27
PTN-202ENST00000393083 SARS2Q9NP81 518 aaKnown RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms