RNA–Protein interactions for RNA: ENST00000392542.6

RFC5-201, Transcript of replication factor C subunit 5, humanhuman

TSL 2 BASIC

Gene RFC5, Length 2,449 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5-201ENST00000392542 RAD51BO15315 384 aa12.13□□□□□ -0.47
RFC5-201ENST00000392542 FFAR2O15552 330 aa12.13□□□□□ -0.47
RFC5-201ENST00000392542 ABLIM3O94929 683 aa12.13□□□□□ -0.47
RFC5-201ENST00000392542 PGLSO95336 258 aa12.13□□□□□ -0.47
RFC5-201ENST00000392542 GLUD1P00367 558 aa12.13□□□□□ -0.47
RFC5-201ENST00000392542 INHAP05111 366 aa12.13□□□□□ -0.47
RFC5-201ENST00000392542 ALPIP09923 528 aa12.13□□□□□ -0.47
RFC5-201ENST00000392542 MBL2P11226 248 aaPredicted RBP12.13□□□□□ -0.47
RFC5-201ENST00000392542 CDH2P19022 906 aaPredicted RBP12.13□□□□□ -0.47
RFC5-201ENST00000392542 HRH2P25021 359 aa12.13□□□□□ -0.47
RFC5-201ENST00000392542 CSKP41240 450 aa12.13□□□□□ -0.47
RFC5-201ENST00000392542 ALDH7A1P49419 539 aaKnown RBP12.13□□□□□ -0.47
RFC5-201ENST00000392542 AP1S1P61966 158 aa12.13□□□□□ -0.47
RFC5-201ENST00000392542 SLC36A3Q495N2 470 aa12.13□□□□□ -0.47
RFC5-201ENST00000392542 KCTD21Q4G0X4 260 aa12.13□□□□□ -0.47
RFC5-201ENST00000392542 KIAA1841Q6NSI8 718 aa12.13□□□□□ -0.47
RFC5-201ENST00000392542 HJURPQ8NCD3 748 aaPredicted RBP12.13□□□□□ -0.47
RFC5-201ENST00000392542 ZNF461Q8TAF7 563 aa12.13□□□□□ -0.47
RFC5-201ENST00000392542 PIH1D2Q8WWB5 315 aa12.13□□□□□ -0.47
RFC5-201ENST00000392542 CCDC97Q96F63 343 aaPredicted RBP12.13□□□□□ -0.47
RFC5-201ENST00000392542 LRRC3Q9BY71 257 aa12.13□□□□□ -0.47
RFC5-201ENST00000392542 CLPBQ9H078 707 aa12.13□□□□□ -0.47
RFC5-201ENST00000392542 DNMT3BQ9UBC3 853 aaKnown RBP12.13□□□□□ -0.47
RFC5-201ENST00000392542 USP22Q9UPT9 525 aa12.13□□□□□ -0.47
RFC5-201ENST00000392542 SCN8AQ9UQD0 1980 aa12.13□□□□□ -0.47
RFC5-201ENST00000392542 ARNTLO00327 626 aa12.12□□□□□ -0.47
RFC5-201ENST00000392542 IFRD1O00458 451 aaPredicted RBP12.12□□□□□ -0.47
RFC5-201ENST00000392542 PITPNM1O00562 1244 aa12.12□□□□□ -0.47
RFC5-201ENST00000392542 LSM1O15116 133 aaKnown RBP12.12□□□□□ -0.47
RFC5-201ENST00000392542 BMP10O95393 424 aa12.12□□□□□ -0.47
RFC5-201ENST00000392542 ASLP04424 464 aa12.12□□□□□ -0.47
RFC5-201ENST00000392542 RGS4P49798 205 aa12.12□□□□□ -0.47
RFC5-201ENST00000392542 SMAD3P84022 425 aaKnown RBP12.12□□□□□ -0.47
RFC5-201ENST00000392542 TRAF3Q13114 568 aa12.12□□□□□ -0.47
RFC5-201ENST00000392542 NR6A1Q15406 480 aa12.12□□□□□ -0.47
RFC5-201ENST00000392542 TMEM259Q4ZIN3 620 aa12.12□□□□□ -0.47
RFC5-201ENST00000392542 CYP20A1Q6UW02 462 aa12.12□□□□□ -0.47
RFC5-201ENST00000392542 FAM151BQ6UXP7 276 aa12.12□□□□□ -0.47
RFC5-201ENST00000392542 CHCHD4Q8N4Q1 142 aa12.12□□□□□ -0.47
RFC5-201ENST00000392542 TNIP2Q8NFZ5 429 aa12.12□□□□□ -0.47
RFC5-201ENST00000392542 BIRC7Q96CA5 298 aa12.12□□□□□ -0.47
RFC5-201ENST00000392542 DTNBP1Q96EV8 351 aa12.12□□□□□ -0.47
RFC5-201ENST00000392542 ALG14Q96F25 216 aa12.12□□□□□ -0.47
RFC5-201ENST00000392542 HIC2Q96JB3 615 aa12.12□□□□□ -0.47
RFC5-201ENST00000392542 HHIPL1Q96JK4 782 aa12.12□□□□□ -0.47
RFC5-201ENST00000392542 CIPCQ9C0C6 399 aa12.12□□□□□ -0.47
RFC5-201ENST00000392542 ACTL8Q9H568 366 aa12.12□□□□□ -0.47
RFC5-201ENST00000392542 RPF2Q9H7B2 306 aaKnown RBP12.12□□□□□ -0.47
RFC5-201ENST00000392542 HMX1Q9NP08 348 aaPredicted RBP12.12□□□□□ -0.47
RFC5-201ENST00000392542 TUBA8Q9NY65 449 aaPredicted RBP12.12□□□□□ -0.47
RFC5-201ENST00000392542 GNPTGQ9UJJ9 305 aa12.12□□□□□ -0.47
RFC5-201ENST00000392542 POLR3HQ9Y535 204 aaPredicted RBP12.12□□□□□ -0.47
RFC5-201ENST00000392542 ZNF106Q9H2Y7 1883 aaKnown RBP12.12□□□□□ -0.47
RFC5-201ENST00000392542 TRIM64CA6NLI5 447 aa12.12□□□□□ -0.47
RFC5-201ENST00000392542 GAPDHSO14556 408 aaPredicted RBP12.12□□□□□ -0.47
RFC5-201ENST00000392542 SCAMP3O14828 347 aaKnown RBP12.12□□□□□ -0.47
RFC5-201ENST00000392542 PRAMEF1O95521 474 aa12.12□□□□□ -0.47
RFC5-201ENST00000392542 OTCP00480 354 aa12.12□□□□□ -0.47
RFC5-201ENST00000392542 GNAO1P09471 354 aa12.12□□□□□ -0.47
RFC5-201ENST00000392542 CNPP09543 421 aaKnown RBP12.12□□□□□ -0.47
RFC5-201ENST00000392542 G6PDP11413 515 aa12.12□□□□□ -0.47
RFC5-201ENST00000392542 HMOX2P30519 316 aa12.12□□□□□ -0.47
RFC5-201ENST00000392542 CA5AP35218 305 aa12.12□□□□□ -0.47
RFC5-201ENST00000392542 PPP3CCP48454 512 aa12.12□□□□□ -0.47
RFC5-201ENST00000392542 OR4D2P58180 307 aa12.12□□□□□ -0.47
RFC5-201ENST00000392542 VEPH1Q14D04 833 aa12.12□□□□□ -0.47
RFC5-201ENST00000392542 HABP4Q5JVS0 413 aaKnown RBP12.12□□□□□ -0.47
RFC5-201ENST00000392542 TPGS2Q68CL5 300 aa12.12□□□□□ -0.47
RFC5-201ENST00000392542 DLEU7Q6UYE1 221 aa12.12□□□□□ -0.47
RFC5-201ENST00000392542 RBFAQ8N0V3 343 aa12.12□□□□□ -0.47
RFC5-201ENST00000392542 DCAF4L2Q8NA75 395 aa12.12□□□□□ -0.47
RFC5-201ENST00000392542 LKAAEAR1Q8TD35 194 aa12.12□□□□□ -0.47
RFC5-201ENST00000392542 OSCP1Q8WVF1 389 aa12.12□□□□□ -0.47
RFC5-201ENST00000392542 IGSF21Q96ID5 467 aa12.12□□□□□ -0.47
RFC5-201ENST00000392542 RPL10LQ96L21 214 aaKnown RBP12.12□□□□□ -0.47
RFC5-201ENST00000392542 BOCQ9BWV1 1114 aa12.12□□□□□ -0.47
RFC5-201ENST00000392542 RSL24D1Q9UHA3 163 aaKnown RBP12.12□□□□□ -0.47
RFC5-201ENST00000392542 MAGEL2Q9UJ55 1249 aa12.12□□□□□ -0.47
RFC5-201ENST00000392542 PTBP2Q9UKA9 531 aaKnown RBP12.12□□□□□ -0.47
RFC5-201ENST00000392542 OARD1Q9Y530 152 aa12.12□□□□□ -0.47
RFC5-201ENST00000392542 PCDHB3Q9Y5E6 796 aa12.12□□□□□ -0.47
RFC5-201ENST00000392542 A0A1B0GVG6 124 aa12.11□□□□□ -0.47
RFC5-201ENST00000392542 GFRA2O00451 464 aa12.11□□□□□ -0.47
RFC5-201ENST00000392542 EI24O14681 340 aa12.11□□□□□ -0.47
RFC5-201ENST00000392542 ANKRD28O15084 1053 aa12.11□□□□□ -0.47
RFC5-201ENST00000392542 TAPBPO15533 448 aa12.11□□□□□ -0.47
RFC5-201ENST00000392542 KATNA1O75449 491 aa12.11□□□□□ -0.47
RFC5-201ENST00000392542 LDLRP01130 860 aa12.11□□□□□ -0.47
RFC5-201ENST00000392542 ITGB6P18564 788 aa12.11□□□□□ -0.47
RFC5-201ENST00000392542 SLC5A2P31639 672 aa12.11□□□□□ -0.47
RFC5-201ENST00000392542 SOX11P35716 441 aa12.11□□□□□ -0.47
RFC5-201ENST00000392542 HSPA7P48741 367 aa12.11□□□□□ -0.47
RFC5-201ENST00000392542 CDH15P55291 814 aa12.11□□□□□ -0.47
RFC5-201ENST00000392542 ABRAXAS2Q15018 415 aa12.11□□□□□ -0.47
RFC5-201ENST00000392542 AP5B1Q2VPB7 878 aa12.11□□□□□ -0.47
RFC5-201ENST00000392542 TTC33Q6PID6 262 aaPredicted RBP12.11□□□□□ -0.47
RFC5-201ENST00000392542 SNX20Q7Z614 316 aa12.11□□□□□ -0.47
RFC5-201ENST00000392542 MILR1Q7Z6M3 343 aa12.11□□□□□ -0.47
RFC5-201ENST00000392542 WFDC5Q8TCV5 224 aa12.11□□□□□ -0.47
RFC5-201ENST00000392542 TMIGD2Q96BF3 282 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms