RNA–Protein interactions for RNA: ENST00000391855.2

GGPS1-203, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2 BASIC

Gene GGPS1, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-203ENST00000391855 TMEM164Q5U3C3 297 aa12.42□□□□□ -0.42
GGPS1-203ENST00000391855 NKAIN2Q5VXU1 208 aa12.42□□□□□ -0.42
GGPS1-203ENST00000391855 LRRC8BQ6P9F7 803 aa12.42□□□□□ -0.42
GGPS1-203ENST00000391855 KLHL35Q6PF15 583 aa12.42□□□□□ -0.42
GGPS1-203ENST00000391855 FOXR1Q6PIV2 292 aa12.42□□□□□ -0.42
GGPS1-203ENST00000391855 TMPRSS9Q7Z410 1059 aa12.42□□□□□ -0.42
GGPS1-203ENST00000391855 ZNF761Q86XN6 746 aaPredicted RBP12.42□□□□□ -0.42
GGPS1-203ENST00000391855 AGBL5Q8NDL9 886 aa12.42□□□□□ -0.42
GGPS1-203ENST00000391855 OR13J1Q8NGT2 312 aa12.42□□□□□ -0.42
GGPS1-203ENST00000391855 COG1Q8WTW3 980 aa12.42□□□□□ -0.42
GGPS1-203ENST00000391855 ZFPM2Q8WW38 1151 aa12.42□□□□□ -0.42
GGPS1-203ENST00000391855 AP1M1Q9BXS5 423 aa12.42□□□□□ -0.42
GGPS1-203ENST00000391855 MRM3Q9HC36 420 aaKnown RBP12.42□□□□□ -0.42
GGPS1-203ENST00000391855 ACSL6Q9UKU0 697 aa12.42□□□□□ -0.42
GGPS1-203ENST00000391855 MN1Q10571 1320 aaPredicted RBP12.42□□□□□ -0.42
GGPS1-203ENST00000391855 ACACAQ13085 2346 aa12.41□□□□□ -0.42
GGPS1-203ENST00000391855 OR52A4PA6NMU1 304 aa12.41□□□□□ -0.42
GGPS1-203ENST00000391855 NVLO15381 856 aaKnown RBP12.41□□□□□ -0.42
GGPS1-203ENST00000391855 TOX3O15405 576 aaPredicted RBP12.41□□□□□ -0.42
GGPS1-203ENST00000391855 FTH1P02794 183 aa12.41□□□□□ -0.42
GGPS1-203ENST00000391855 MTHFD1P11586 935 aaKnown RBP12.41□□□□□ -0.42
GGPS1-203ENST00000391855 MLNP12872 115 aa12.41□□□□□ -0.42
GGPS1-203ENST00000391855 AMD1P17707 334 aa12.41□□□□□ -0.42
GGPS1-203ENST00000391855 CD82P27701 267 aa12.41□□□□□ -0.42
GGPS1-203ENST00000391855 NDUFS1P28331 727 aa12.41□□□□□ -0.42
GGPS1-203ENST00000391855 MAPK9P45984 424 aa12.41□□□□□ -0.42
GGPS1-203ENST00000391855 SESN2P58004 480 aaPredicted RBP12.41□□□□□ -0.42
GGPS1-203ENST00000391855 GNG11P61952 73 aa12.41□□□□□ -0.42
GGPS1-203ENST00000391855 GPS1Q13098 491 aa12.41□□□□□ -0.42
GGPS1-203ENST00000391855 RPA4Q13156 261 aa12.41□□□□□ -0.42
GGPS1-203ENST00000391855 KCNJ11Q14654 390 aa12.41□□□□□ -0.42
GGPS1-203ENST00000391855 CLCA4Q14CN2 919 aa12.41□□□□□ -0.42
GGPS1-203ENST00000391855 C16orf72Q14CZ0 275 aa12.41□□□□□ -0.42
GGPS1-203ENST00000391855 RPE65Q16518 533 aa12.41□□□□□ -0.42
GGPS1-203ENST00000391855 FASTKD1Q53R41 847 aaKnown RBP12.41□□□□□ -0.42
GGPS1-203ENST00000391855 TTC27Q6P3X3 843 aa12.41□□□□□ -0.42
GGPS1-203ENST00000391855 ZNF574Q6ZN55 896 aaPredicted RBP12.41□□□□□ -0.42
GGPS1-203ENST00000391855 FAM83HQ6ZRV2 1179 aaPredicted RBP12.41□□□□□ -0.42
GGPS1-203ENST00000391855 PIANPQ8IYJ0 282 aa12.41□□□□□ -0.42
GGPS1-203ENST00000391855 MPP5Q8N3R9 675 aa12.41□□□□□ -0.42
GGPS1-203ENST00000391855 OR4L1Q8NH43 312 aa12.41□□□□□ -0.42
GGPS1-203ENST00000391855 KCNE4Q8WWG9 221 aa12.41□□□□□ -0.42
GGPS1-203ENST00000391855 NCSTNQ92542 709 aa12.41□□□□□ -0.42
GGPS1-203ENST00000391855 HDAC10Q969S8 669 aa12.41□□□□□ -0.42
GGPS1-203ENST00000391855 TBC1D10AQ9BXI6 508 aa12.41□□□□□ -0.42
GGPS1-203ENST00000391855 DPH1Q9BZG8 443 aa12.41□□□□□ -0.42
GGPS1-203ENST00000391855 SLC40A1Q9NP59 571 aa12.41□□□□□ -0.42
GGPS1-203ENST00000391855 PISDQ9UG56 409 aa12.41□□□□□ -0.42
GGPS1-203ENST00000391855 ANAPC5Q9UJX4 755 aa12.41□□□□□ -0.42
GGPS1-203ENST00000391855 WDR37Q9Y2I8 494 aa12.41□□□□□ -0.42
GGPS1-203ENST00000391855 HEBP2Q9Y5Z4 205 aa12.41□□□□□ -0.42
GGPS1-203ENST00000391855 APC2O95996 2303 aa12.41□□□□□ -0.42
GGPS1-203ENST00000391855 CACNA1BQ00975 2339 aa12.4□□□□□ -0.42
GGPS1-203ENST00000391855 FRYQ5TBA9 3013 aa12.4□□□□□ -0.42
GGPS1-203ENST00000391855 CCDC78A2IDD5 438 aa12.4□□□□□ -0.42
GGPS1-203ENST00000391855 B4E171 279 aa12.4□□□□□ -0.42
GGPS1-203ENST00000391855 LIN7AO14910 233 aaPredicted RBP12.4□□□□□ -0.42
GGPS1-203ENST00000391855 UBXN7O94888 489 aa12.4□□□□□ -0.42
GGPS1-203ENST00000391855 GOT2P00505 430 aaKnown RBP12.4□□□□□ -0.42
GGPS1-203ENST00000391855 ANKRD34CP0C6C1 535 aa12.4□□□□□ -0.42
GGPS1-203ENST00000391855 OR56A5P0C7T3 313 aa12.4□□□□□ -0.42
GGPS1-203ENST00000391855 HOXB3P14651 431 aaPredicted RBP12.4□□□□□ -0.42
GGPS1-203ENST00000391855 TSPAN7P41732 249 aa12.4□□□□□ -0.42
GGPS1-203ENST00000391855 CAPZBP47756 277 aa12.4□□□□□ -0.42
GGPS1-203ENST00000391855 CDKN1CP49918 316 aaPredicted RBP12.4□□□□□ -0.42
GGPS1-203ENST00000391855 UCNP55089 124 aa12.4□□□□□ -0.42
GGPS1-203ENST00000391855 PLOD1Q02809 727 aaPredicted RBP12.4□□□□□ -0.42
GGPS1-203ENST00000391855 CFHR1Q03591 330 aa12.4□□□□□ -0.42
GGPS1-203ENST00000391855 GPR18Q14330 331 aa12.4□□□□□ -0.42
GGPS1-203ENST00000391855 ZNF534Q76KX8 674 aa12.4□□□□□ -0.42
GGPS1-203ENST00000391855 CFAP206Q8IYR0 622 aa12.4□□□□□ -0.42
GGPS1-203ENST00000391855 MCUQ8NE86 351 aa12.4□□□□□ -0.42
GGPS1-203ENST00000391855 OR6P1Q8NGX9 317 aa12.4□□□□□ -0.42
GGPS1-203ENST00000391855 C12orf66Q96MD2 445 aa12.4□□□□□ -0.42
GGPS1-203ENST00000391855 RUNDC3BQ96NL0 473 aa12.4□□□□□ -0.42
GGPS1-203ENST00000391855 TSSK1BQ9BXA7 367 aa12.4□□□□□ -0.42
GGPS1-203ENST00000391855 RAB33BQ9H082 229 aa12.4□□□□□ -0.42
GGPS1-203ENST00000391855 WWP1Q9H0M0 922 aa12.4□□□□□ -0.42
GGPS1-203ENST00000391855 COG4Q9H9E3 785 aa12.4□□□□□ -0.42
GGPS1-203ENST00000391855 XAB2Q9HCS7 855 aaKnown RBP12.4□□□□□ -0.42
GGPS1-203ENST00000391855 TREX1Q9NSU2 369 aa12.4□□□□□ -0.42
GGPS1-203ENST00000391855 IMP3Q9NV31 184 aaKnown RBP12.4□□□□□ -0.42
GGPS1-203ENST00000391855 SMARCAL1Q9NZC9 954 aa12.4□□□□□ -0.42
GGPS1-203ENST00000391855 EPHA6Q9UF33 1036 aa12.4□□□□□ -0.42
GGPS1-203ENST00000391855 PCDHGA3Q9Y5H0 932 aa12.4□□□□□ -0.42
GGPS1-203ENST00000391855 COLEC10Q9Y6Z7 277 aa12.4□□□□□ -0.42
GGPS1-203ENST00000391855 SPEGQ15772 3267 aa12.4□□□□□ -0.42
GGPS1-203ENST00000391855 USP27XA6NNY8 438 aa12.39□□□□□ -0.43
GGPS1-203ENST00000391855 IFRD1O00458 451 aaPredicted RBP12.39□□□□□ -0.43
GGPS1-203ENST00000391855 C9P02748 559 aa12.39□□□□□ -0.43
GGPS1-203ENST00000391855 HGFP14210 728 aa12.39□□□□□ -0.43
GGPS1-203ENST00000391855 PAMP19021 973 aa12.39□□□□□ -0.43
GGPS1-203ENST00000391855 CD151P48509 253 aa12.39□□□□□ -0.43
GGPS1-203ENST00000391855 TTPAP49638 278 aa12.39□□□□□ -0.43
GGPS1-203ENST00000391855 VPS41P49754 854 aa12.39□□□□□ -0.43
GGPS1-203ENST00000391855 RAB15P59190 212 aa12.39□□□□□ -0.43
GGPS1-203ENST00000391855 TRIP13Q15645 432 aaPredicted RBP12.39□□□□□ -0.43
GGPS1-203ENST00000391855 BROXQ5VW32 411 aa12.39□□□□□ -0.43
GGPS1-203ENST00000391855 PAPD7Q5XG87 772 aaKnown RBP12.39□□□□□ -0.43
GGPS1-203ENST00000391855 CAPRIN2Q6IMN6 1127 aaKnown RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms