RNA–Protein interactions for RNA: ENST00000381870.7

CTNS-202, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 1 (best) BASIC

Gene CTNS, Length 2,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-202ENST00000381870 VAT1Q99536 393 aa14.8□□□□□ -0.04
CTNS-202ENST00000381870 ACTR8Q9H981 624 aa14.8□□□□□ -0.04
CTNS-202ENST00000381870 TPRKBQ9Y3C4 175 aa14.8□□□□□ -0.04
CTNS-202ENST00000381870 CCL22O00626 93 aa14.79□□□□□ -0.04
CTNS-202ENST00000381870 SLC16A6O15403 523 aa14.79□□□□□ -0.04
CTNS-202ENST00000381870 STAU1O95793 577 aaKnown RBP14.79□□□□□ -0.04
CTNS-202ENST00000381870 SLC4A1P02730 911 aa14.79□□□□□ -0.04
CTNS-202ENST00000381870 HOXD8P13378 290 aaPredicted RBP14.79□□□□□ -0.04
CTNS-202ENST00000381870 PAMP19021 973 aa14.79□□□□□ -0.04
CTNS-202ENST00000381870 PRKACBP22694 351 aa14.79□□□□□ -0.04
CTNS-202ENST00000381870 DNAJB2P25686 324 aa14.79□□□□□ -0.04
CTNS-202ENST00000381870 CLCN5P51795 746 aa14.79□□□□□ -0.04
CTNS-202ENST00000381870 NFKB2Q00653 900 aa14.79□□□□□ -0.04
CTNS-202ENST00000381870 GBX1Q14549 363 aa14.79□□□□□ -0.04
CTNS-202ENST00000381870 SLC14A2Q15849 920 aa14.79□□□□□ -0.04
CTNS-202ENST00000381870 SMU1Q2TAY7 513 aa14.79□□□□□ -0.04
CTNS-202ENST00000381870 KIAA0930Q6ICG6 404 aaPredicted RBP14.79□□□□□ -0.04
CTNS-202ENST00000381870 NECAB2Q7Z6G3 386 aa14.79□□□□□ -0.04
CTNS-202ENST00000381870 ELMOD2Q8IZ81 293 aa14.79□□□□□ -0.04
CTNS-202ENST00000381870 WNT8BQ93098 351 aa14.79□□□□□ -0.04
CTNS-202ENST00000381870 UGT2B28Q9BY64 529 aa14.79□□□□□ -0.04
CTNS-202ENST00000381870 PLEKHA5Q9HAU0 1116 aa14.79□□□□□ -0.04
CTNS-202ENST00000381870 SEMA4BQ9NPR2 832 aaPredicted RBP14.79□□□□□ -0.04
CTNS-202ENST00000381870 TRMT13Q9NUP7 481 aaKnown RBP14.79□□□□□ -0.04
CTNS-202ENST00000381870 DSCR3O14972 297 aa14.78□□□□□ -0.04
CTNS-202ENST00000381870 DNTTP04053 509 aa14.78□□□□□ -0.04
CTNS-202ENST00000381870 JUNDP17535 347 aa14.78□□□□□ -0.04
CTNS-202ENST00000381870 LIPAP38571 399 aa14.78□□□□□ -0.04
CTNS-202ENST00000381870 IL1RL1Q01638 556 aa14.78□□□□□ -0.04
CTNS-202ENST00000381870 FADDQ13158 208 aa14.78□□□□□ -0.04
CTNS-202ENST00000381870 LAPTM4AQ15012 233 aa14.78□□□□□ -0.04
CTNS-202ENST00000381870 AAK1Q2M2I8 961 aa14.78□□□□□ -0.04
CTNS-202ENST00000381870 EFCAB12Q6NXP0 572 aa14.78□□□□□ -0.04
CTNS-202ENST00000381870 JPH3Q8WXH2 748 aaPredicted RBP14.78□□□□□ -0.04
CTNS-202ENST00000381870 PABPC5Q96DU9 382 aaKnown RBP14.78□□□□□ -0.04
CTNS-202ENST00000381870 TSPAN17Q96FV3 270 aa14.78□□□□□ -0.04
CTNS-202ENST00000381870 ACAD9Q9H845 621 aa14.78□□□□□ -0.04
CTNS-202ENST00000381870 C14orf119Q9NWQ9 140 aa14.78□□□□□ -0.04
CTNS-202ENST00000381870 NPAP1Q9NZP6 1156 aa14.78□□□□□ -0.04
CTNS-202ENST00000381870 WBP11Q9Y2W2 641 aaKnown RBP14.78□□□□□ -0.04
CTNS-202ENST00000381870 AAR2Q9Y312 384 aaKnown RBP14.78□□□□□ -0.04
CTNS-202ENST00000381870 PCDHGB6Q9Y5F9 930 aa14.78□□□□□ -0.04
CTNS-202ENST00000381870 COL11A1P12107 1806 aaPredicted RBP14.78□□□□□ -0.04
CTNS-202ENST00000381870 SSC5DA1L4H1 1573 aa14.78□□□□□ -0.04
CTNS-202ENST00000381870 OR2A25A4D2G3 310 aa14.78□□□□□ -0.04
CTNS-202ENST00000381870 CLDN24A6NM45 220 aa14.78□□□□□ -0.04
CTNS-202ENST00000381870 RGS10O43665 173 aa14.78□□□□□ -0.04
CTNS-202ENST00000381870 KATNA1O75449 491 aa14.78□□□□□ -0.04
CTNS-202ENST00000381870 CRCPO75575 148 aa14.78□□□□□ -0.04
CTNS-202ENST00000381870 SEMA3DO95025 777 aa14.78□□□□□ -0.04
CTNS-202ENST00000381870 APOA1P02647 267 aa14.78□□□□□ -0.04
CTNS-202ENST00000381870 PRDX3P30048 256 aaKnown RBP14.78□□□□□ -0.04
CTNS-202ENST00000381870 RABGGTBP53611 331 aa14.78□□□□□ -0.04
CTNS-202ENST00000381870 GPLD1P80108 840 aa14.78□□□□□ -0.04
CTNS-202ENST00000381870 OR4D1Q15615 310 aa14.78□□□□□ -0.04
CTNS-202ENST00000381870 LY6KQ17RY6 165 aa14.78□□□□□ -0.04
CTNS-202ENST00000381870 PLEKHG6Q3KR16 790 aa14.78□□□□□ -0.04
CTNS-202ENST00000381870 SPATA19Q7Z5L4 167 aa14.78□□□□□ -0.04
CTNS-202ENST00000381870 NATD1Q8N6N6 113 aa14.78□□□□□ -0.04
CTNS-202ENST00000381870 OR2T11Q8NH01 316 aa14.78□□□□□ -0.04
CTNS-202ENST00000381870 PROKR1Q8TCW9 393 aa14.78□□□□□ -0.04
CTNS-202ENST00000381870 SEPT1Q8WYJ6 367 aa14.78□□□□□ -0.04
CTNS-202ENST00000381870 ZNF583Q96ND8 569 aa14.78□□□□□ -0.04
CTNS-202ENST00000381870 CITED4Q96RK1 184 aa14.78□□□□□ -0.04
CTNS-202ENST00000381870 CDADC1Q9BWV3 514 aa14.78□□□□□ -0.04
CTNS-202ENST00000381870 RIBC2Q9H4K1 309 aa14.78□□□□□ -0.04
CTNS-202ENST00000381870 RNF167Q9H6Y7 350 aa14.78□□□□□ -0.04
CTNS-202ENST00000381870 EHD3Q9NZN3 535 aa14.78□□□□□ -0.04
CTNS-202ENST00000381870 ADGRE2Q9UHX3 823 aa14.78□□□□□ -0.04
CTNS-202ENST00000381870 MRPL42Q9Y6G3 142 aaKnown RBP14.78□□□□□ -0.04
CTNS-202ENST00000381870 AIREO43918 545 aa14.77□□□□□ -0.04
CTNS-202ENST00000381870 WISP3O95389 354 aaPredicted RBP14.77□□□□□ -0.04
CTNS-202ENST00000381870 PRR35P0CG20 571 aa14.77□□□□□ -0.04
CTNS-202ENST00000381870 ZNF45Q02386 682 aa14.77□□□□□ -0.04
CTNS-202ENST00000381870 BCL7AQ4VC05 210 aa14.77□□□□□ -0.04
CTNS-202ENST00000381870 PRSS36Q5K4E3 855 aa14.77□□□□□ -0.04
CTNS-202ENST00000381870 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.77□□□□□ -0.04
CTNS-202ENST00000381870 EID3Q8N140 333 aa14.77□□□□□ -0.04
CTNS-202ENST00000381870 NEDD4LQ96PU5 975 aa14.77□□□□□ -0.04
CTNS-202ENST00000381870 SCN3BQ9NY72 215 aa14.77□□□□□ -0.04
CTNS-202ENST00000381870 A0A0G2JMZ2 1700 aa14.77□□□□□ -0.04
CTNS-202ENST00000381870 LRRC37A2A6NM11 1700 aa14.77□□□□□ -0.04
CTNS-202ENST00000381870 A0A0G2JMP0 313 aa14.77□□□□□ -0.05
CTNS-202ENST00000381870 A0A0U1RQS6 177 aa14.77□□□□□ -0.05
CTNS-202ENST00000381870 GSTA4O15217 222 aa14.77□□□□□ -0.05
CTNS-202ENST00000381870 PSMD3O43242 534 aa14.77□□□□□ -0.05
CTNS-202ENST00000381870 BEST1O76090 585 aa14.77□□□□□ -0.05
CTNS-202ENST00000381870 MTHFD2P13995 350 aa14.77□□□□□ -0.05
CTNS-202ENST00000381870 CD1DP15813 335 aa14.77□□□□□ -0.05
CTNS-202ENST00000381870 ARF4P18085 180 aaPredicted RBP14.77□□□□□ -0.05
CTNS-202ENST00000381870 GADD45AP24522 165 aa14.77□□□□□ -0.05
CTNS-202ENST00000381870 DEFA1P59665 94 aa14.77□□□□□ -0.05
CTNS-202ENST00000381870 DEFA3P59666 94 aa14.77□□□□□ -0.05
CTNS-202ENST00000381870 TUBA1BP68363 451 aa14.77□□□□□ -0.05
CTNS-202ENST00000381870 SOWAHCQ53LP3 525 aaPredicted RBP14.77□□□□□ -0.05
CTNS-202ENST00000381870 KIAA0319Q5VV43 1072 aa14.77□□□□□ -0.05
CTNS-202ENST00000381870 TUBA1AQ71U36 451 aa14.77□□□□□ -0.05
CTNS-202ENST00000381870 ZNF438Q7Z4V0 828 aa14.77□□□□□ -0.05
CTNS-202ENST00000381870 OR5K1Q8NHB7 308 aa14.77□□□□□ -0.05
CTNS-202ENST00000381870 SLC16A10Q8TF71 515 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms