RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 CYP4F2P78329 520 aa13.68□□□□□ -0.22
SDC1-202ENST00000381150 NKX3-2P78367 333 aa13.68□□□□□ -0.22
SDC1-202ENST00000381150 CACNB2Q08289 660 aaPredicted RBP13.68□□□□□ -0.22
SDC1-202ENST00000381150 CYP4F3Q08477 520 aa13.68□□□□□ -0.22
SDC1-202ENST00000381150 PSMD5Q16401 504 aa13.68□□□□□ -0.22
SDC1-202ENST00000381150 ARL13BQ3SXY8 428 aa13.68□□□□□ -0.22
SDC1-202ENST00000381150 CYHR1Q6ZMK1 362 aa13.68□□□□□ -0.22
SDC1-202ENST00000381150 RBM23Q86U06 439 aaKnown RBP13.68□□□□□ -0.22
SDC1-202ENST00000381150 FAM126BQ8IXS8 530 aa13.68□□□□□ -0.22
SDC1-202ENST00000381150 ZNF540Q8NDQ6 660 aa13.68□□□□□ -0.22
SDC1-202ENST00000381150 MYLPFQ96A32 169 aa13.68□□□□□ -0.22
SDC1-202ENST00000381150 CTRCQ99895 268 aa13.68□□□□□ -0.22
SDC1-202ENST00000381150 MCMBPQ9BTE3 642 aa13.68□□□□□ -0.22
SDC1-202ENST00000381150 FAM118AQ9NWS6 357 aa13.68□□□□□ -0.22
SDC1-202ENST00000381150 KLHL3Q9UH77 587 aa13.68□□□□□ -0.22
SDC1-202ENST00000381150 SARDHQ9UL12 918 aa13.68□□□□□ -0.22
SDC1-202ENST00000381150 B3GNT3Q9Y2A9 372 aa13.68□□□□□ -0.22
SDC1-202ENST00000381150 PATJQ8NI35 1801 aa13.68□□□□□ -0.22
SDC1-202ENST00000381150 TRIM64CA6NLI5 447 aa13.68□□□□□ -0.22
SDC1-202ENST00000381150 MITFO75030 526 aaPredicted RBP13.68□□□□□ -0.22
SDC1-202ENST00000381150 CYP7B1O75881 506 aa13.68□□□□□ -0.22
SDC1-202ENST00000381150 IGLV3-25P01717 112 aa13.68□□□□□ -0.22
SDC1-202ENST00000381150 CYP11A1P05108 521 aa13.68□□□□□ -0.22
SDC1-202ENST00000381150 GSTM2P28161 218 aa13.68□□□□□ -0.22
SDC1-202ENST00000381150 POU4F1Q01851 419 aa13.68□□□□□ -0.22
SDC1-202ENST00000381150 ILF2Q12905 390 aaKnown RBP13.68□□□□□ -0.22
SDC1-202ENST00000381150 DSC3Q14574 896 aa13.68□□□□□ -0.22
SDC1-202ENST00000381150 DPY19L1Q2PZI1 675 aa13.68□□□□□ -0.22
SDC1-202ENST00000381150 UNC50Q53HI1 259 aa13.68□□□□□ -0.22
SDC1-202ENST00000381150 ZNF678Q5SXM1 525 aa13.68□□□□□ -0.22
SDC1-202ENST00000381150 GTF2IRD2BQ6EKJ0 949 aa13.68□□□□□ -0.22
SDC1-202ENST00000381150 ENPP6Q6UWR7 440 aa13.68□□□□□ -0.22
SDC1-202ENST00000381150 GTF2IRD2Q86UP8 949 aa13.68□□□□□ -0.22
SDC1-202ENST00000381150 KLHDC8BQ8IXV7 354 aa13.68□□□□□ -0.22
SDC1-202ENST00000381150 CHDHQ8NE62 594 aaPredicted RBP13.68□□□□□ -0.22
SDC1-202ENST00000381150 FAM83FQ8NEG4 500 aaPredicted RBP13.68□□□□□ -0.22
SDC1-202ENST00000381150 ATL1Q8WXF7 558 aa13.68□□□□□ -0.22
SDC1-202ENST00000381150 ZNF486Q96H40 463 aaPredicted RBP13.68□□□□□ -0.22
SDC1-202ENST00000381150 ACBD6Q9BR61 282 aa13.68□□□□□ -0.22
SDC1-202ENST00000381150 TDRD1Q9BXT4 1180 aaKnown RBP13.68□□□□□ -0.22
SDC1-202ENST00000381150 TRMT13Q9NUP7 481 aaKnown RBP13.68□□□□□ -0.22
SDC1-202ENST00000381150 ENPP5Q9UJA9 477 aa13.68□□□□□ -0.22
SDC1-202ENST00000381150 GPSM3Q9Y4H4 160 aa13.68□□□□□ -0.22
SDC1-202ENST00000381150 KCTD3Q9Y597 815 aa13.68□□□□□ -0.22
SDC1-202ENST00000381150 SNX8Q9Y5X2 465 aa13.68□□□□□ -0.22
SDC1-202ENST00000381150 ILVBLA1L0T0 632 aa13.68□□□□□ -0.22
SDC1-202ENST00000381150 PDZK1P1A8MUH7 402 aa13.68□□□□□ -0.22
SDC1-202ENST00000381150 ENPP3O14638 875 aa13.68□□□□□ -0.22
SDC1-202ENST00000381150 KATNA1O75449 491 aa13.68□□□□□ -0.22
SDC1-202ENST00000381150 RECQL5O94762 991 aaPredicted RBP13.68□□□□□ -0.22
SDC1-202ENST00000381150 F9P00740 461 aa13.68□□□□□ -0.22
SDC1-202ENST00000381150 HSMCR30P0CW71 290 aa13.68□□□□□ -0.22
SDC1-202ENST00000381150 HSD17B1P14061 328 aa13.68□□□□□ -0.22
SDC1-202ENST00000381150 TGM1P22735 817 aa13.68□□□□□ -0.22
SDC1-202ENST00000381150 PRDX3P30048 256 aaKnown RBP13.68□□□□□ -0.22
SDC1-202ENST00000381150 GP2P55259 537 aaKnown RBP13.68□□□□□ -0.22
SDC1-202ENST00000381150 CDKN2DP55273 166 aa13.68□□□□□ -0.22
SDC1-202ENST00000381150 EMX1Q04741 257 aaPredicted RBP13.68□□□□□ -0.22
SDC1-202ENST00000381150 SELPLGQ14242 412 aa13.68□□□□□ -0.22
SDC1-202ENST00000381150 SMN1Q16637 294 aaKnown RBP13.68□□□□□ -0.22
SDC1-202ENST00000381150 DESI1Q6ICB0 168 aa13.68□□□□□ -0.22
SDC1-202ENST00000381150 SLC22A9Q8IVM8 553 aa13.68□□□□□ -0.22
SDC1-202ENST00000381150 CDYL2Q8N8U2 506 aa13.68□□□□□ -0.22
SDC1-202ENST00000381150 ROGDIQ9GZN7 287 aa13.68□□□□□ -0.22
SDC1-202ENST00000381150 IL37Q9NZH6 218 aa13.68□□□□□ -0.22
SDC1-202ENST00000381150 FNDC1Q4ZHG4 1894 aaPredicted RBP13.68□□□□□ -0.22
SDC1-202ENST00000381150 BBIP1A8MTZ0 92 aa13.67□□□□□ -0.22
SDC1-202ENST00000381150 UGT2B11O75310 529 aa13.67□□□□□ -0.22
SDC1-202ENST00000381150 SLC22A3O75751 556 aa13.67□□□□□ -0.22
SDC1-202ENST00000381150 IMPDH1P20839 514 aa13.67□□□□□ -0.22
SDC1-202ENST00000381150 ARNTP27540 789 aa13.67□□□□□ -0.22
SDC1-202ENST00000381150 ACAP2Q15057 778 aa13.67□□□□□ -0.22
SDC1-202ENST00000381150 SULT1C3Q6IMI6 304 aa13.67□□□□□ -0.22
SDC1-202ENST00000381150 SLC16A12Q6ZSM3 486 aa13.67□□□□□ -0.22
SDC1-202ENST00000381150 TTC30BQ8N4P2 665 aa13.67□□□□□ -0.22
SDC1-202ENST00000381150 MINDY1Q8N5J2 469 aa13.67□□□□□ -0.22
SDC1-202ENST00000381150 TMEM209Q96SK2 561 aa13.67□□□□□ -0.22
SDC1-202ENST00000381150 KIFC1Q9BW19 673 aa13.67□□□□□ -0.22
SDC1-202ENST00000381150 GMIPQ9P107 970 aa13.67□□□□□ -0.22
SDC1-202ENST00000381150 PADI3Q9ULW8 664 aa13.67□□□□□ -0.22
SDC1-202ENST00000381150 UGT2A1Q9Y4X1 527 aa13.67□□□□□ -0.22
SDC1-202ENST00000381150 M0QZQ0 153 aa13.67□□□□□ -0.22
SDC1-202ENST00000381150 RFPL2O75678 378 aa13.67□□□□□ -0.22
SDC1-202ENST00000381150 DIRAS1O95057 198 aa13.67□□□□□ -0.22
SDC1-202ENST00000381150 HTR1AP08908 422 aa13.67□□□□□ -0.22
SDC1-202ENST00000381150 PCSK1P29120 753 aa13.67□□□□□ -0.22
SDC1-202ENST00000381150 BRCC3P46736 316 aa13.67□□□□□ -0.22
SDC1-202ENST00000381150 NPTX1Q15818 432 aa13.67□□□□□ -0.22
SDC1-202ENST00000381150 SGO1Q5FBB7 561 aa13.67□□□□□ -0.22
SDC1-202ENST00000381150 TAC4Q86UU9 113 aa13.67□□□□□ -0.22
SDC1-202ENST00000381150 DTWD1Q8N5C7 304 aa13.67□□□□□ -0.22
SDC1-202ENST00000381150 OR10A6Q8NH74 314 aa13.67□□□□□ -0.22
SDC1-202ENST00000381150 BLOC1S5Q8TDH9 187 aa13.67□□□□□ -0.22
SDC1-202ENST00000381150 PTERQ96BW5 349 aa13.67□□□□□ -0.22
SDC1-202ENST00000381150 BEX2Q9BXY8 128 aa13.67□□□□□ -0.22
SDC1-202ENST00000381150 PRRG3Q9BZD7 231 aa13.67□□□□□ -0.22
SDC1-202ENST00000381150 TRHDEQ9UKU6 1024 aa13.67□□□□□ -0.22
SDC1-202ENST00000381150 AAR2Q9Y312 384 aaKnown RBP13.67□□□□□ -0.22
SDC1-202ENST00000381150 OAS3Q9Y6K5 1087 aaKnown RBP13.67□□□□□ -0.22
SDC1-202ENST00000381150 SLC1A7O00341 560 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms