RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 ST14Q9Y5Y6 855 aa22.76■■□□□ 1.23
VPS16-201ENST00000380443 LAMA3Q16787 3333 aa22.76■■□□□ 1.23
VPS16-201ENST00000380443 E7ENX8 843 aa22.75■■□□□ 1.23
VPS16-201ENST00000380443 ANGPT2O15123 496 aa22.75■■□□□ 1.23
VPS16-201ENST00000380443 PIK3CGP48736 1102 aa22.75■■□□□ 1.23
VPS16-201ENST00000380443 SPINT3P49223 89 aa22.75■■□□□ 1.23
VPS16-201ENST00000380443 GTF2H2Q13888 395 aa22.75■■□□□ 1.23
VPS16-201ENST00000380443 SMU1Q2TAY7 513 aa22.75■■□□□ 1.23
VPS16-201ENST00000380443 GTF2H2CQ6P1K8 395 aa22.75■■□□□ 1.23
VPS16-201ENST00000380443 BLOC1S3Q6QNY0 202 aa22.75■■□□□ 1.23
VPS16-201ENST00000380443 IZUMO2Q6UXV1 221 aa22.75■■□□□ 1.23
VPS16-201ENST00000380443 ADGRG2Q8IZP9 1017 aa22.75■■□□□ 1.23
VPS16-201ENST00000380443 MINDY1Q8N5J2 469 aa22.75■■□□□ 1.23
VPS16-201ENST00000380443 HEPHQ9BQS7 1158 aa22.75■■□□□ 1.23
VPS16-201ENST00000380443 ERVW-1Q9UQF0 538 aa22.75■■□□□ 1.23
VPS16-201ENST00000380443 TIMM22Q9Y584 194 aa22.75■■□□□ 1.23
VPS16-201ENST00000380443 TSPAN11A1L157 253 aa22.75■■□□□ 1.23
VPS16-201ENST00000380443 STAMBPO95630 424 aa22.75■■□□□ 1.23
VPS16-201ENST00000380443 UGT2B4P06133 528 aa22.75■■□□□ 1.23
VPS16-201ENST00000380443 ARSAP15289 507 aa22.75■■□□□ 1.23
VPS16-201ENST00000380443 WEE1P30291 646 aa22.75■■□□□ 1.23
VPS16-201ENST00000380443 MS4A2Q01362 244 aa22.75■■□□□ 1.23
VPS16-201ENST00000380443 ARHGEF7Q14155 803 aa22.75■■□□□ 1.23
VPS16-201ENST00000380443 LY6G5CQ5SRR4 150 aa22.75■■□□□ 1.23
VPS16-201ENST00000380443 IRAK1BP1Q5VVH5 260 aa22.75■■□□□ 1.23
VPS16-201ENST00000380443 RNF111Q6ZNA4 994 aa22.75■■□□□ 1.23
VPS16-201ENST00000380443 GOLGA7Q7Z5G4 137 aa22.75■■□□□ 1.23
VPS16-201ENST00000380443 CLDN19Q8N6F1 224 aa22.75■■□□□ 1.23
VPS16-201ENST00000380443 BHLHE22Q8NFJ8 381 aaPredicted RBP22.75■■□□□ 1.23
VPS16-201ENST00000380443 GDPD5Q8WTR4 605 aa22.75■■□□□ 1.23
VPS16-201ENST00000380443 PPP2R3CQ969Q6 453 aa22.75■■□□□ 1.23
VPS16-201ENST00000380443 NOL11Q9H8H0 719 aaKnown RBP22.75■■□□□ 1.23
VPS16-201ENST00000380443 SMOXQ9NWM0 555 aa22.75■■□□□ 1.23
VPS16-201ENST00000380443 SLCO3A1Q9UIG8 710 aa22.75■■□□□ 1.23
VPS16-201ENST00000380443 ADAMTS6Q9UKP5 1117 aa22.75■■□□□ 1.23
VPS16-201ENST00000380443 A0A1B0GTL3 188 aa22.74■■□□□ 1.23
VPS16-201ENST00000380443 KPNA5O15131 536 aa22.74■■□□□ 1.23
VPS16-201ENST00000380443 OR4F21O95013 312 aa22.74■■□□□ 1.23
VPS16-201ENST00000380443 ASLP04424 464 aa22.74■■□□□ 1.23
VPS16-201ENST00000380443 ENO2P09104 434 aaPredicted RBP22.74■■□□□ 1.23
VPS16-201ENST00000380443 PRDX3P30048 256 aaKnown RBP22.74■■□□□ 1.23
VPS16-201ENST00000380443 CA5AP35218 305 aa22.74■■□□□ 1.23
VPS16-201ENST00000380443 ERFP50548 548 aa22.74■■□□□ 1.23
VPS16-201ENST00000380443 DCDC1P59894 354 aa22.74■■□□□ 1.23
VPS16-201ENST00000380443 ERVPABLB-1P60509 514 aa22.74■■□□□ 1.23
VPS16-201ENST00000380443 ANO7Q6IWH7 933 aa22.74■■□□□ 1.23
VPS16-201ENST00000380443 PDSS2Q86YH6 399 aa22.74■■□□□ 1.23
VPS16-201ENST00000380443 OR9I1Q8NGQ6 314 aa22.74■■□□□ 1.23
VPS16-201ENST00000380443 OR2A12Q8NGT7 310 aa22.74■■□□□ 1.23
VPS16-201ENST00000380443 METTL6Q8TCB7 284 aa22.74■■□□□ 1.23
VPS16-201ENST00000380443 LKAAEAR1Q8TD35 194 aa22.74■■□□□ 1.23
VPS16-201ENST00000380443 WFIKKN2Q8TEU8 576 aa22.74■■□□□ 1.23
VPS16-201ENST00000380443 DUS3LQ96G46 650 aaKnown RBP22.74■■□□□ 1.23
VPS16-201ENST00000380443 GPATCH1Q9BRR8 931 aaKnown RBP22.74■■□□□ 1.23
VPS16-201ENST00000380443 NFKBIL1Q9UBC1 381 aaPredicted RBP22.74■■□□□ 1.23
VPS16-201ENST00000380443 FBXO10Q9UK96 956 aa22.74■■□□□ 1.23
VPS16-201ENST00000380443 PTGDR2Q9Y5Y4 395 aa22.74■■□□□ 1.23
VPS16-201ENST00000380443 TRIOBPQ9H2D6 2365 aa22.74■■□□□ 1.23
VPS16-201ENST00000380443 GRXCR2A6NFK2 248 aa22.73■■□□□ 1.23
VPS16-201ENST00000380443 NR5A2O00482 541 aa22.73■■□□□ 1.23
VPS16-201ENST00000380443 SRPRAP08240 638 aaKnown RBP22.73■■□□□ 1.23
VPS16-201ENST00000380443 C1SP09871 688 aa22.73■■□□□ 1.23
VPS16-201ENST00000380443 LHCGRP22888 699 aa22.73■■□□□ 1.23
VPS16-201ENST00000380443 RAB30Q15771 203 aa22.73■■□□□ 1.23
VPS16-201ENST00000380443 SLC5A9Q2M3M2 681 aa22.73■■□□□ 1.23
VPS16-201ENST00000380443 MAP7D1Q3KQU3 841 aa22.73■■□□□ 1.23
VPS16-201ENST00000380443 OGFRL1Q5TC84 451 aaPredicted RBP22.73■■□□□ 1.23
VPS16-201ENST00000380443 KBTBD2Q8IY47 623 aa22.73■■□□□ 1.23
VPS16-201ENST00000380443 ATP6V1E2Q96A05 226 aa22.73■■□□□ 1.23
VPS16-201ENST00000380443 KLHL32Q96NJ5 620 aa22.73■■□□□ 1.23
VPS16-201ENST00000380443 CD244Q9BZW8 370 aa22.73■■□□□ 1.23
VPS16-201ENST00000380443 LINC00597Q9H2U6 94 aa22.73■■□□□ 1.23
VPS16-201ENST00000380443 B4GALT6Q9UBX8 382 aa22.73■■□□□ 1.23
VPS16-201ENST00000380443 A0A1W2PP18 115 aa22.73■■□□□ 1.23
VPS16-201ENST00000380443 BNIP3LO60238 219 aa22.73■■□□□ 1.23
VPS16-201ENST00000380443 WDR47O94967 919 aa22.73■■□□□ 1.23
VPS16-201ENST00000380443 NPPAP01160 153 aa22.73■■□□□ 1.23
VPS16-201ENST00000380443 C8BP07358 591 aa22.73■■□□□ 1.23
VPS16-201ENST00000380443 VIPR1P32241 457 aa22.73■■□□□ 1.23
VPS16-201ENST00000380443 CDKL1Q00532 357 aa22.73■■□□□ 1.23
VPS16-201ENST00000380443 ATP6AP1LQ52LC2 224 aa22.73■■□□□ 1.23
VPS16-201ENST00000380443 Q6ZVU0 165 aa22.73■■□□□ 1.23
VPS16-201ENST00000380443 APLFQ8IW19 511 aaPredicted RBP22.73■■□□□ 1.23
VPS16-201ENST00000380443 TCAIMQ8N3R3 496 aa22.73■■□□□ 1.23
VPS16-201ENST00000380443 TIFAQ96CG3 184 aa22.73■■□□□ 1.23
VPS16-201ENST00000380443 LRGUKQ96M69 825 aa22.73■■□□□ 1.23
VPS16-201ENST00000380443 YY1AP1Q9H869 796 aa22.73■■□□□ 1.23
VPS16-201ENST00000380443 ABCD2Q9UBJ2 740 aa22.73■■□□□ 1.23
VPS16-201ENST00000380443 MSRAQ9UJ68 235 aa22.73■■□□□ 1.23
VPS16-201ENST00000380443 LINC01553A4QN01 128 aa22.72■■□□□ 1.23
VPS16-201ENST00000380443 IFRD1O00458 451 aaPredicted RBP22.72■■□□□ 1.23
VPS16-201ENST00000380443 OR7A17O14581 309 aa22.72■■□□□ 1.23
VPS16-201ENST00000380443 ARHGEF15O94989 841 aa22.72■■□□□ 1.23
VPS16-201ENST00000380443 ITGB6P18564 788 aa22.72■■□□□ 1.23
VPS16-201ENST00000380443 KCNK10P57789 538 aa22.72■■□□□ 1.23
VPS16-201ENST00000380443 EMX2Q04743 252 aa22.72■■□□□ 1.23
VPS16-201ENST00000380443 ATP13A5Q4VNC0 1218 aa22.72■■□□□ 1.23
VPS16-201ENST00000380443 FBXO48Q5FWF7 155 aa22.72■■□□□ 1.23
VPS16-201ENST00000380443 FAM109BQ6ICB4 259 aaPredicted RBP22.72■■□□□ 1.23
VPS16-201ENST00000380443 MILR1Q7Z6M3 343 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms